| PAX8 | Q06710 | RPL21P2-201 | ENST00000440049 | 481 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | RPL39P40-201 | ENST00000445481 | 146 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | BTF3P15-201 | ENST00000455606 | 336 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | AL139260.1-202 | ENST00000456813 | 441 nt | TSL 3 BASIC | 2.25 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | RPL21P39-201 | ENST00000463605 | 483 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | AC130509.1-201 | ENST00000464158 | 433 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | AC087190.1-201 | ENST00000484462 | 480 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | AC093591.1-201 | ENST00000491435 | 481 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | RPL21P16-201 | ENST00000495531 | 483 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | AC126768.3-201 | ENST00000514519 | 560 nt | TSL 4 BASIC | 2.25 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | Y_RNA.675-201 | ENST00000516389 | 149 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | AC092746.1-201 | ENST00000542819 | 562 nt | TSL 4 BASIC | 2.25 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | AC021739.1-201 | ENST00000559631 | 174 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | AC025580.2-205 | ENST00000559960 | 552 nt | TSL 4 BASIC | 2.25 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | CERS3-AS1-201 | ENST00000560643 | 372 nt | TSL 3 BASIC | 2.25 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | AC015818.4-201 | ENST00000580931 | 353 nt | TSL 5 BASIC | 2.25 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | AC024610.1-201 | ENST00000582685 | 323 nt | TSL 3 BASIC | 2.25 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | AC008121.1-201 | ENST00000603244 | 268 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | AC016727.1-205 | ENST00000605437 | 569 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | AL161629.2-201 | ENST00000615347 | 275 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | AL359757.2-201 | ENST00000624309 | 274 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | PLS1-201 | ENST00000337777 | 3755 nt | APPRIS P1 TSL 1 (best) BASIC | 2.25 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | OR4K2-204 | ENST00000641885 | 8681 nt | APPRIS P1 BASIC | 2.25 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | AL136360.1-201 | ENST00000503377 | 1900 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | TECRL-202 | ENST00000507440 | 2876 nt | TSL 5 BASIC | 2.24 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | AC110491.1-201 | ENST00000562191 | 2010 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | HERC4-201 | ENST00000277817 | 4371 nt | TSL 1 (best) BASIC | 2.24 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | RNU6-859P-201 | ENST00000362728 | 107 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | RNU4-79P-201 | ENST00000362764 | 141 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | Y_RNA.67-201 | ENST00000362870 | 100 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | RNU6-942P-201 | ENST00000363002 | 107 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | AL445529.1-201 | ENST00000398713 | 389 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | U3.37-201 | ENST00000408528 | 213 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | RN7SKP158-201 | ENST00000410453 | 326 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | RNA5SP492-201 | ENST00000411330 | 114 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | HMGN2P10-201 | ENST00000448085 | 265 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | AL031274.1-201 | ENST00000450334 | 232 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | RNU7-187P-201 | ENST00000458985 | 68 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | AC128713.1-201 | ENST00000471495 | 306 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | ATP1B3-AS1-201 | ENST00000492725 | 376 nt | TSL 5 BASIC | 2.24 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | AC026801.1-201 | ENST00000497178 | 464 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | RPS27P27-201 | ENST00000498779 | 255 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | RAC1P5-201 | ENST00000512182 | 576 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | RN7SKP24-201 | ENST00000515888 | 284 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | RNU6-581P-201 | ENST00000516214 | 105 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | RGS4-209 | ENST00000531057 | 544 nt | TSL 4 BASIC | 2.24 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | AC027018.1-202 | ENST00000534723 | 383 nt | TSL 3 BASIC | 2.24 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | HSPE1P20-201 | ENST00000538133 | 289 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | NACAP3-201 | ENST00000552100 | 481 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | UBE2Q2P8-201 | ENST00000560644 | 102 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | AC007151.1-201 | ENST00000572774 | 483 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | AC113139.1-201 | ENST00000605049 | 239 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | AC019159.1-201 | ENST00000605094 | 187 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | AL121917.1-203 | ENST00000605534 | 577 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | AC005696.2-201 | ENST00000610120 | 626 nt | TSL 3 BASIC | 2.24 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | AC011890.2-201 | ENST00000613393 | 294 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | AC138058.1-201 | ENST00000620572 | 449 nt | TSL 3 BASIC | 2.24 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | AC002064.3-201 | ENST00000623448 | 346 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | AC073544.1-201 | ENST00000600110 | 1595 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | CDC27P3-201 | ENST00000635418 | 1910 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | RAPGEF6-210 | ENST00000512052 | 3535 nt | TSL 2 BASIC | 2.23 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | FAM184A-202 | ENST00000352896 | 3700 nt | APPRIS ALT1 TSL 1 (best) BASIC | 2.23 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | RNU1-100P-201 | ENST00000365255 | 165 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | RNU6-827P-201 | ENST00000365553 | 106 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | Y_RNA.535-201 | ENST00000384612 | 99 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | MIR196B-201 | ENST00000384852 | 84 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | AL139396.1-201 | ENST00000421137 | 167 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | UBE2V1P4-201 | ENST00000425374 | 344 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | TOMM20P4-201 | ENST00000427861 | 435 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | NCOA7-AS1-201 | ENST00000429007 | 501 nt | TSL 3 BASIC | 2.23 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | SNAP23P1-201 | ENST00000433229 | 246 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | AC002386.1-201 | ENST00000436714 | 398 nt | TSL 2 BASIC | 2.23 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | FABP5P14-201 | ENST00000437273 | 393 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | AC107399.1-201 | ENST00000451226 | 265 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | RNU7-23P-201 | ENST00000459465 | 62 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | ODF2L-216 | ENST00000486215 | 311 nt | TSL 2 BASIC | 2.23 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | AC096745.1-201 | ENST00000509945 | 370 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | AC096725.1-201 | ENST00000514266 | 313 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | SNORA31.21-201 | ENST00000517180 | 77 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | AC108449.1-202 | ENST00000517632 | 478 nt | TSL 3 BASIC | 2.23 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | LINC02545-201 | ENST00000525381 | 306 nt | TSL 3 BASIC | 2.23 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | AP003174.2-201 | ENST00000544663 | 294 nt | TSL 3 BASIC | 2.23 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | AC127894.1-201 | ENST00000548266 | 851 nt | TSL 3 BASIC | 2.23 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | AL133279.1-202 | ENST00000556789 | 456 nt | TSL 5 BASIC | 2.23 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | AC023906.2-201 | ENST00000558343 | 462 nt | TSL 3 BASIC | 2.23 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | MIR3605-201 | ENST00000583214 | 100 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | AC023043.3-201 | ENST00000593113 | 385 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | RPL23AP78-201 | ENST00000599928 | 470 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | AC022140.2-201 | ENST00000623500 | 188 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | MAP3K2-203 | ENST00000409947 | 10992 nt | APPRIS P1 TSL 1 (best) BASIC | 2.23 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | AC006026.1-201 | ENST00000444025 | 1803 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | SENP7-205 | ENST00000394091 | 4434 nt | APPRIS ALT2 TSL 1 (best) BASIC | 2.22 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | RFESD-202 | ENST00000380005 | 2587 nt | TSL 2 BASIC | 2.22 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | ZBED5-201 | ENST00000413761 | 2512 nt | APPRIS P1 TSL 1 (best) BASIC | 2.22 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | RPL9P7-201 | ENST00000330965 | 580 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | ZBTB8OSP1-201 | ENST00000342688 | 498 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | MIR449A-201 | ENST00000362113 | 91 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | RNU6-78P-201 | ENST00000362897 | 107 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | RNU6-428P-201 | ENST00000362942 | 107 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | RNU6-694P-201 | ENST00000364071 | 147 nt | BASIC | 2.22 | □□□□□ -2.05 | | |