Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 AC140059.1-201ENST00000489238 361 ntBASIC2.27□□□□□ -2.05
GABPAQ06546 SNORA43.2-201ENST00000516652 128 ntBASIC2.27□□□□□ -2.05
GABPAQ06546 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.27□□□□□ -2.05
GABPAQ06546 AC079598.5-201ENST00000547460 117 ntBASIC2.27□□□□□ -2.05
GABPAQ06546 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC2.27□□□□□ -2.05
GABPAQ06546 MIR4658-201ENST00000584344 65 ntBASIC2.27□□□□□ -2.05
GABPAQ06546 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC2.27□□□□□ -2.05
GABPAQ06546 AC011494.1-201ENST00000596454 237 ntBASIC2.27□□□□□ -2.05
GABPAQ06546 AC009314.1-201ENST00000603871 304 ntBASIC2.27□□□□□ -2.05
GABPAQ06546 AC021646.1-201ENST00000605469 484 ntBASIC2.27□□□□□ -2.05
GABPAQ06546 HMGB1P24-202ENST00000615653 685 ntBASIC2.27□□□□□ -2.05
GABPAQ06546 RMST_4.1-201ENST00000616886 107 ntBASIC2.27□□□□□ -2.05
GABPAQ06546 AC139792.3-201ENST00000623525 224 ntBASIC2.27□□□□□ -2.05
GABPAQ06546 AC244517.12-201ENST00000623581 663 ntBASIC2.27□□□□□ -2.05
GABPAQ06546 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.27□□□□□ -2.05
GABPAQ06546 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
GABPAQ06546 AC002543.1-201ENST00000299783 1954 ntBASIC2.27□□□□□ -2.05
GABPAQ06546 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.26□□□□□ -2.05
GABPAQ06546 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
GABPAQ06546 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.26□□□□□ -2.05
GABPAQ06546 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
GABPAQ06546 RNU6-552P-201ENST00000362869 119 ntBASIC2.26□□□□□ -2.05
GABPAQ06546 SNORA38-201ENST00000363946 132 ntBASIC2.26□□□□□ -2.05
GABPAQ06546 Y_RNA.194-201ENST00000363985 102 ntBASIC2.26□□□□□ -2.05
GABPAQ06546 Y_RNA.324-201ENST00000365165 102 ntBASIC2.26□□□□□ -2.05
GABPAQ06546 RNU6-517P-201ENST00000384362 110 ntBASIC2.26□□□□□ -2.05
GABPAQ06546 MIR583-201ENST00000384846 75 ntBASIC2.26□□□□□ -2.05
GABPAQ06546 MIR144-201ENST00000384886 86 ntBASIC2.26□□□□□ -2.05
GABPAQ06546 MIR524-201ENST00000385242 87 ntBASIC2.26□□□□□ -2.05
GABPAQ06546 RNU6-1158P-201ENST00000391167 107 ntBASIC2.26□□□□□ -2.05
GABPAQ06546 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.26□□□□□ -2.05
GABPAQ06546 AC010975.2-201ENST00000427781 588 ntBASIC2.26□□□□□ -2.05
GABPAQ06546 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
GABPAQ06546 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.26□□□□□ -2.05
GABPAQ06546 AL606489.2-201ENST00000433886 234 ntBASIC2.26□□□□□ -2.05
GABPAQ06546 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC2.26□□□□□ -2.05
GABPAQ06546 AC011753.1-201ENST00000451001 220 ntBASIC2.26□□□□□ -2.05
GABPAQ06546 AC080013.2-201ENST00000460866 323 ntBASIC2.26□□□□□ -2.05
GABPAQ06546 AC090515.1-201ENST00000465295 476 ntBASIC2.26□□□□□ -2.05
GABPAQ06546 RPL7P43-201ENST00000478876 753 ntBASIC2.26□□□□□ -2.05
GABPAQ06546 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.26□□□□□ -2.05
GABPAQ06546 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.26□□□□□ -2.05
GABPAQ06546 HMGB3P3-201ENST00000510526 400 ntBASIC2.26□□□□□ -2.05
GABPAQ06546 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.26□□□□□ -2.05
GABPAQ06546 RNA5SP82-201ENST00000516707 92 ntBASIC2.26□□□□□ -2.05
GABPAQ06546 HIF1AP1-201ENST00000553642 175 ntBASIC2.26□□□□□ -2.05
GABPAQ06546 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.26□□□□□ -2.05
GABPAQ06546 MYL12BP1-201ENST00000569826 507 ntBASIC2.26□□□□□ -2.05
GABPAQ06546 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.26□□□□□ -2.05
GABPAQ06546 AC004223.2-201ENST00000590309 544 ntBASIC2.26□□□□□ -2.05
GABPAQ06546 AL121917.1-203ENST00000605534 577 ntBASIC2.26□□□□□ -2.05
GABPAQ06546 AC093788.1-201ENST00000609356 927 ntBASIC2.26□□□□□ -2.05
GABPAQ06546 AC104073.3-201ENST00000610942 955 ntBASIC2.26□□□□□ -2.05
GABPAQ06546 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC2.26□□□□□ -2.05
GABPAQ06546 AL449363.1-201ENST00000617815 186 ntBASIC2.26□□□□□ -2.05
GABPAQ06546 RMST_7.1-201ENST00000621935 268 ntBASIC2.26□□□□□ -2.05
GABPAQ06546 MIR6863-201ENST00000636112 90 ntBASIC2.26□□□□□ -2.05
GABPAQ06546 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.26□□□□□ -2.05
GABPAQ06546 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
GABPAQ06546 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
GABPAQ06546 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.25□□□□□ -2.05
GABPAQ06546 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
GABPAQ06546 SNORD56.1-201ENST00000362913 68 ntBASIC2.25□□□□□ -2.05
GABPAQ06546 Y_RNA.436-201ENST00000384097 102 ntBASIC2.25□□□□□ -2.05
GABPAQ06546 RNU6-1127P-201ENST00000384580 107 ntBASIC2.25□□□□□ -2.05
GABPAQ06546 RNU2-16P-201ENST00000410712 136 ntBASIC2.25□□□□□ -2.05
GABPAQ06546 CYCSP48-201ENST00000417124 323 ntBASIC2.25□□□□□ -2.05
GABPAQ06546 AC074117.2-201ENST00000417130 397 ntBASIC2.25□□□□□ -2.05
GABPAQ06546 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.25□□□□□ -2.05
GABPAQ06546 DLGAP5P1-201ENST00000430307 464 ntBASIC2.25□□□□□ -2.05
GABPAQ06546 AC003989.2-201ENST00000440224 169 ntBASIC2.25□□□□□ -2.05
GABPAQ06546 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.25□□□□□ -2.05
GABPAQ06546 AL163973.1-201ENST00000484753 577 ntBASIC2.25□□□□□ -2.05
GABPAQ06546 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.25□□□□□ -2.05
GABPAQ06546 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.25□□□□□ -2.05
GABPAQ06546 RNU2-69P-201ENST00000516061 100 ntBASIC2.25□□□□□ -2.05
GABPAQ06546 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC2.25□□□□□ -2.05
GABPAQ06546 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.25□□□□□ -2.05
GABPAQ06546 AC024581.2-201ENST00000619986 252 ntBASIC2.25□□□□□ -2.05
GABPAQ06546 OR5AK4P-201ENST00000635912 903 ntBASIC2.25□□□□□ -2.05
GABPAQ06546 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.25□□□□□ -2.05
GABPAQ06546 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
GABPAQ06546 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.24□□□□□ -2.05
GABPAQ06546 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
GABPAQ06546 RNU6-37P-201ENST00000362692 107 ntBASIC2.24□□□□□ -2.05
GABPAQ06546 RNA5SP99-201ENST00000364020 114 ntBASIC2.24□□□□□ -2.05
GABPAQ06546 RNU6-11P-201ENST00000364234 107 ntBASIC2.24□□□□□ -2.05
GABPAQ06546 RNA5SP125-201ENST00000364843 120 ntBASIC2.24□□□□□ -2.05
GABPAQ06546 RNU5E-7P-201ENST00000365290 117 ntBASIC2.24□□□□□ -2.05
GABPAQ06546 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
GABPAQ06546 RNU6-25P-201ENST00000383873 107 ntBASIC2.24□□□□□ -2.05
GABPAQ06546 RNU6-1-201ENST00000383898 107 ntBASIC2.24□□□□□ -2.05
GABPAQ06546 RNU6-48P-201ENST00000384161 107 ntBASIC2.24□□□□□ -2.05
GABPAQ06546 RNU6-36P-201ENST00000384172 107 ntBASIC2.24□□□□□ -2.05
GABPAQ06546 RNU6-4P-201ENST00000384205 107 ntBASIC2.24□□□□□ -2.05
GABPAQ06546 RNU6-5P-201ENST00000384238 107 ntBASIC2.24□□□□□ -2.05
GABPAQ06546 RNU6-3P-201ENST00000384314 107 ntBASIC2.24□□□□□ -2.05
GABPAQ06546 RNU6-16P-201ENST00000384385 107 ntBASIC2.24□□□□□ -2.05
GABPAQ06546 RNU6-15P-201ENST00000384534 107 ntBASIC2.24□□□□□ -2.05
GABPAQ06546 RNU6-2-201ENST00000384627 107 ntBASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 121.6 ms