Protein–RNA interactions for Protein: Q05048

CSTF1, Cleavage stimulation factor subunit 1, humanhuman

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1Q05048 AC008121.3-201ENST00000618726 433 ntBASIC2□□□□□ -2.09
CSTF1Q05048 YWHAEP7-203ENST00000622054 312 ntBASIC2□□□□□ -2.09
CSTF1Q05048 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.99□□□□□ -2.09
CSTF1Q05048 ELL2P3-201ENST00000457883 1602 ntBASIC1.99□□□□□ -2.09
CSTF1Q05048 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
CSTF1Q05048 RNA5SP276-201ENST00000362580 94 ntBASIC1.99□□□□□ -2.09
CSTF1Q05048 Y_RNA.51-201ENST00000362725 102 ntBASIC1.99□□□□□ -2.09
CSTF1Q05048 RNU6-942P-201ENST00000363002 107 ntBASIC1.99□□□□□ -2.09
CSTF1Q05048 RNU6-384P-201ENST00000364900 104 ntBASIC1.99□□□□□ -2.09
CSTF1Q05048 SNORD115-7-201ENST00000365306 82 ntBASIC1.99□□□□□ -2.09
CSTF1Q05048 Y_RNA.367-201ENST00000365544 101 ntBASIC1.99□□□□□ -2.09
CSTF1Q05048 MIR1-2-201ENST00000384961 85 ntBASIC1.99□□□□□ -2.09
CSTF1Q05048 MIR561-201ENST00000385216 97 ntBASIC1.99□□□□□ -2.09
CSTF1Q05048 RN7SKP142-201ENST00000411236 328 ntBASIC1.99□□□□□ -2.09
CSTF1Q05048 AL031779.1-201ENST00000415663 330 ntBASIC1.99□□□□□ -2.09
CSTF1Q05048 AC008267.5-201ENST00000424928 265 ntBASIC1.99□□□□□ -2.09
CSTF1Q05048 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.99□□□□□ -2.09
CSTF1Q05048 GPR143P-201ENST00000434155 205 ntBASIC1.99□□□□□ -2.09
CSTF1Q05048 NDUFA5P4-201ENST00000436704 385 ntBASIC1.99□□□□□ -2.09
CSTF1Q05048 MTCO1P19-201ENST00000443487 500 ntBASIC1.99□□□□□ -2.09
CSTF1Q05048 AL360221.1-201ENST00000445989 335 ntBASIC1.99□□□□□ -2.09
CSTF1Q05048 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.99□□□□□ -2.09
CSTF1Q05048 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.99□□□□□ -2.09
CSTF1Q05048 RNU6-717P-201ENST00000459076 104 ntBASIC1.99□□□□□ -2.09
CSTF1Q05048 RPL30P12-201ENST00000474666 353 ntBASIC1.99□□□□□ -2.09
CSTF1Q05048 RPL7P43-201ENST00000478876 753 ntBASIC1.99□□□□□ -2.09
CSTF1Q05048 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC1.99□□□□□ -2.09
CSTF1Q05048 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC1.99□□□□□ -2.09
CSTF1Q05048 AC091965.2-201ENST00000512324 613 ntBASIC1.99□□□□□ -2.09
CSTF1Q05048 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC1.99□□□□□ -2.09
CSTF1Q05048 RNU1-86P-201ENST00000516108 154 ntBASIC1.99□□□□□ -2.09
CSTF1Q05048 RNU1-107P-201ENST00000516617 154 ntBASIC1.99□□□□□ -2.09
CSTF1Q05048 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC1.99□□□□□ -2.09
CSTF1Q05048 AC136619.2-201ENST00000563361 631 ntBASIC1.99□□□□□ -2.09
CSTF1Q05048 AC093249.1-201ENST00000567049 203 ntBASIC1.99□□□□□ -2.09
CSTF1Q05048 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC1.99□□□□□ -2.09
CSTF1Q05048 MIR5002-201ENST00000584713 97 ntBASIC1.99□□□□□ -2.09
CSTF1Q05048 AL359821.1-201ENST00000605519 182 ntBASIC1.99□□□□□ -2.09
CSTF1Q05048 uc_338.15-201ENST00000615470 191 ntBASIC1.99□□□□□ -2.09
CSTF1Q05048 AC009509.4-201ENST00000619202 509 ntBASIC1.99□□□□□ -2.09
CSTF1Q05048 SCARNA4-202ENST00000625402 129 ntBASIC1.99□□□□□ -2.09
CSTF1Q05048 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
CSTF1Q05048 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.99□□□□□ -2.09
CSTF1Q05048 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
CSTF1Q05048 FARSBP1-201ENST00000435808 1778 ntBASIC1.98□□□□□ -2.09
CSTF1Q05048 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
CSTF1Q05048 AL359851.1-201ENST00000569460 4997 ntBASIC1.98□□□□□ -2.09
CSTF1Q05048 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.98□□□□□ -2.09
CSTF1Q05048 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.98□□□□□ -2.09
CSTF1Q05048 OR4G2P-201ENST00000328113 903 ntBASIC1.98□□□□□ -2.09
CSTF1Q05048 Y_RNA.122-201ENST00000363331 96 ntBASIC1.98□□□□□ -2.09
CSTF1Q05048 RNU1-23P-201ENST00000363361 144 ntBASIC1.98□□□□□ -2.09
CSTF1Q05048 Y_RNA.318-201ENST00000365131 97 ntBASIC1.98□□□□□ -2.09
CSTF1Q05048 Y_RNA.359-201ENST00000365498 102 ntBASIC1.98□□□□□ -2.09
CSTF1Q05048 RNU6-843P-201ENST00000384454 104 ntBASIC1.98□□□□□ -2.09
CSTF1Q05048 MIR186-201ENST00000384988 86 ntBASIC1.98□□□□□ -2.09
CSTF1Q05048 MIR676-201ENST00000390702 67 ntBASIC1.98□□□□□ -2.09
CSTF1Q05048 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.98□□□□□ -2.09
CSTF1Q05048 MTCO3P5-201ENST00000433620 714 ntBASIC1.98□□□□□ -2.09
CSTF1Q05048 NDUFB1P2-201ENST00000449477 176 ntBASIC1.98□□□□□ -2.09
CSTF1Q05048 AL162395.1-201ENST00000457882 422 ntBASIC1.98□□□□□ -2.09
CSTF1Q05048 RPS29P15-201ENST00000458329 171 ntBASIC1.98□□□□□ -2.09
CSTF1Q05048 RNU6-1178P-201ENST00000516674 107 ntBASIC1.98□□□□□ -2.09
CSTF1Q05048 RNU6-586P-201ENST00000517265 104 ntBASIC1.98□□□□□ -2.09
CSTF1Q05048 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.98□□□□□ -2.09
CSTF1Q05048 BNIP3P6-201ENST00000549284 499 ntBASIC1.98□□□□□ -2.09
CSTF1Q05048 AC097065.2-201ENST00000608159 533 ntBASIC1.98□□□□□ -2.09
CSTF1Q05048 AP003400.5-201ENST00000624827 617 ntBASIC1.98□□□□□ -2.09
CSTF1Q05048 AL390237.1-201ENST00000404226 1415 ntBASIC1.98□□□□□ -2.09
CSTF1Q05048 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.98□□□□□ -2.09
CSTF1Q05048 FGF7P2-201ENST00000332473 296 ntBASIC1.97□□□□□ -2.09
CSTF1Q05048 RNU6-661P-201ENST00000362409 107 ntBASIC1.97□□□□□ -2.09
CSTF1Q05048 SNORD115-3-201ENST00000363100 82 ntBASIC1.97□□□□□ -2.09
CSTF1Q05048 RNU6-371P-201ENST00000364283 108 ntBASIC1.97□□□□□ -2.09
CSTF1Q05048 U3.13-201ENST00000364804 214 ntBASIC1.97□□□□□ -2.09
CSTF1Q05048 SNORA25B-201ENST00000365507 128 ntBASIC1.97□□□□□ -2.09
CSTF1Q05048 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
CSTF1Q05048 SNORD116-9-201ENST00000384000 95 ntBASIC1.97□□□□□ -2.09
CSTF1Q05048 SNORA75-201ENST00000384158 137 ntBASIC1.97□□□□□ -2.09
CSTF1Q05048 SNORD116-3-201ENST00000384287 95 ntBASIC1.97□□□□□ -2.09
CSTF1Q05048 RNU5A-2P-201ENST00000384337 116 ntBASIC1.97□□□□□ -2.09
CSTF1Q05048 RNU6-348P-201ENST00000384386 107 ntBASIC1.97□□□□□ -2.09
CSTF1Q05048 SNORD116-7-201ENST00000384404 95 ntBASIC1.97□□□□□ -2.09
CSTF1Q05048 SNORD116-5-201ENST00000384462 95 ntBASIC1.97□□□□□ -2.09
CSTF1Q05048 RNU6-456P-201ENST00000384493 107 ntBASIC1.97□□□□□ -2.09
CSTF1Q05048 RNU6-387P-201ENST00000411331 105 ntBASIC1.97□□□□□ -2.09
CSTF1Q05048 OR6C66P-201ENST00000414917 930 ntBASIC1.97□□□□□ -2.09
CSTF1Q05048 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.97□□□□□ -2.09
CSTF1Q05048 AC009961.2-201ENST00000435771 251 ntBASIC1.97□□□□□ -2.09
CSTF1Q05048 AC079781.2-201ENST00000446424 169 ntBASIC1.97□□□□□ -2.09
CSTF1Q05048 MTND1P29-201ENST00000448112 647 ntBASIC1.97□□□□□ -2.09
CSTF1Q05048 AC006026.2-201ENST00000457376 180 ntBASIC1.97□□□□□ -2.09
CSTF1Q05048 TPT1P7-201ENST00000458300 517 ntBASIC1.97□□□□□ -2.09
CSTF1Q05048 AC006512.1-201ENST00000468816 291 ntBASIC1.97□□□□□ -2.09
CSTF1Q05048 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.97□□□□□ -2.09
CSTF1Q05048 RNA5SP364-201ENST00000516938 78 ntBASIC1.97□□□□□ -2.09
CSTF1Q05048 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.97□□□□□ -2.09
CSTF1Q05048 MIR3913-1-201ENST00000577744 102 ntBASIC1.97□□□□□ -2.09
CSTF1Q05048 AC002984.1-201ENST00000591692 448 ntBASIC1.97□□□□□ -2.09
CSTF1Q05048 AC064872.1-201ENST00000604823 1072 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms