Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC0.82□□□□□ -2.28
H3F3AP84243 NIFKP6-201ENST00000598115 845 ntBASIC0.82□□□□□ -2.28
H3F3AP84243 BNIP3P31-201ENST00000604515 566 ntBASIC0.82□□□□□ -2.28
H3F3AP84243 AL365204.3-201ENST00000612448 685 ntBASIC0.82□□□□□ -2.28
H3F3AP84243 AL158163.2-201ENST00000619110 700 ntBASIC0.82□□□□□ -2.28
H3F3AP84243 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC0.82□□□□□ -2.28
H3F3AP84243 MIR373-201ENST00000362273 69 ntBASIC0.81□□□□□ -2.28
H3F3AP84243 Y_RNA.4-201ENST00000362333 112 ntBASIC0.81□□□□□ -2.28
H3F3AP84243 MIR548B-201ENST00000385247 97 ntBASIC0.81□□□□□ -2.28
H3F3AP84243 SNORA40.2-201ENST00000390847 128 ntBASIC0.81□□□□□ -2.28
H3F3AP84243 MIR1276-201ENST00000408707 83 ntBASIC0.81□□□□□ -2.28
H3F3AP84243 Y_RNA.623-201ENST00000411128 95 ntBASIC0.81□□□□□ -2.28
H3F3AP84243 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.81□□□□□ -2.28
H3F3AP84243 RPL39P28-201ENST00000465655 155 ntBASIC0.81□□□□□ -2.28
H3F3AP84243 AC008837.2-201ENST00000513076 418 ntBASIC0.81□□□□□ -2.28
H3F3AP84243 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.81□□□□□ -2.28
H3F3AP84243 AC136932.1-201ENST00000574771 208 ntBASIC0.81□□□□□ -2.28
H3F3AP84243 AL391001.1-201ENST00000602747 715 ntBASIC0.81□□□□□ -2.28
H3F3AP84243 AC009033.1-201ENST00000624279 431 ntBASIC0.81□□□□□ -2.28
H3F3AP84243 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.81□□□□□ -2.28
H3F3AP84243 AL391516.1-201ENST00000554380 2449 ntBASIC0.81□□□□□ -2.28
H3F3AP84243 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
H3F3AP84243 Y_RNA.255-201ENST00000364581 97 ntBASIC0.8□□□□□ -2.28
H3F3AP84243 RNU1-93P-201ENST00000364704 169 ntBASIC0.8□□□□□ -2.28
H3F3AP84243 MIR520A-201ENST00000384862 85 ntBASIC0.8□□□□□ -2.28
H3F3AP84243 USP9YP33-201ENST00000412220 421 ntBASIC0.8□□□□□ -2.28
H3F3AP84243 C8orf59P1-201ENST00000429930 303 ntBASIC0.8□□□□□ -2.28
H3F3AP84243 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.8□□□□□ -2.28
H3F3AP84243 MTND1P18-201ENST00000448191 573 ntBASIC0.8□□□□□ -2.28
H3F3AP84243 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.8□□□□□ -2.28
H3F3AP84243 RNU1-131P-201ENST00000458943 161 ntBASIC0.8□□□□□ -2.28
H3F3AP84243 RNU6-333P-201ENST00000459117 107 ntBASIC0.8□□□□□ -2.28
H3F3AP84243 MTND2P33-201ENST00000506452 1031 ntBASIC0.8□□□□□ -2.28
H3F3AP84243 MIR449C-201ENST00000516047 92 ntBASIC0.8□□□□□ -2.28
H3F3AP84243 RNU6-113P-201ENST00000516653 101 ntBASIC0.8□□□□□ -2.28
H3F3AP84243 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC0.8□□□□□ -2.28
H3F3AP84243 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC0.8□□□□□ -2.28
H3F3AP84243 AP003465.2-201ENST00000602571 373 ntBASIC0.8□□□□□ -2.28
H3F3AP84243 AC124016.2-201ENST00000610058 665 ntBASIC0.8□□□□□ -2.28
H3F3AP84243 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.8□□□□□ -2.28
H3F3AP84243 AC012676.2-201ENST00000619258 186 ntBASIC0.8□□□□□ -2.28
H3F3AP84243 AC092104.1-201ENST00000497346 1441 ntBASIC0.8□□□□□ -2.28
H3F3AP84243 SNORD114-27-201ENST00000363766 70 ntBASIC0.79□□□□□ -2.28
H3F3AP84243 SMIM11P1-201ENST00000369586 178 ntBASIC0.79□□□□□ -2.28
H3F3AP84243 CYCSP33-201ENST00000414485 327 ntBASIC0.79□□□□□ -2.28
H3F3AP84243 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.79□□□□□ -2.28
H3F3AP84243 VPS26BP1-201ENST00000417155 755 ntBASIC0.79□□□□□ -2.28
H3F3AP84243 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC0.79□□□□□ -2.28
H3F3AP84243 ISCA1P6-201ENST00000427740 390 ntBASIC0.79□□□□□ -2.28
H3F3AP84243 AC034244.1-201ENST00000507687 207 ntBASIC0.79□□□□□ -2.28
H3F3AP84243 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC0.79□□□□□ -2.28
H3F3AP84243 SNORA3.4-201ENST00000515969 96 ntBASIC0.79□□□□□ -2.28
H3F3AP84243 RNA5SP437-201ENST00000517249 129 ntBASIC0.79□□□□□ -2.28
H3F3AP84243 AP003355.1-201ENST00000518956 587 ntBASIC0.79□□□□□ -2.28
H3F3AP84243 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC0.79□□□□□ -2.28
H3F3AP84243 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC0.79□□□□□ -2.28
H3F3AP84243 AC087894.1-201ENST00000538359 518 ntBASIC0.79□□□□□ -2.28
H3F3AP84243 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.79□□□□□ -2.28
H3F3AP84243 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.79□□□□□ -2.28
H3F3AP84243 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC0.79□□□□□ -2.28
H3F3AP84243 AC015688.6-201ENST00000577737 104 ntBASIC0.79□□□□□ -2.28
H3F3AP84243 MIR3973-201ENST00000579824 107 ntBASIC0.79□□□□□ -2.28
H3F3AP84243 BX284668.6-201ENST00000606899 438 ntBASIC0.79□□□□□ -2.28
H3F3AP84243 MIR15A-201ENST00000607334 83 ntBASIC0.79□□□□□ -2.28
H3F3AP84243 AL355816.2-201ENST00000610049 647 ntBASIC0.79□□□□□ -2.28
H3F3AP84243 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
H3F3AP84243 AL354696.1-201ENST00000614652 497 ntBASIC0.79□□□□□ -2.28
H3F3AP84243 MIR8070-201ENST00000616510 88 ntBASIC0.79□□□□□ -2.28
H3F3AP84243 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.79□□□□□ -2.28
H3F3AP84243 RNU1-124P-201ENST00000363861 145 ntBASIC0.78□□□□□ -2.28
H3F3AP84243 RNU6-968P-201ENST00000384076 107 ntBASIC0.78□□□□□ -2.28
H3F3AP84243 RNU6-1222P-201ENST00000384615 107 ntBASIC0.78□□□□□ -2.28
H3F3AP84243 MIR10A-201ENST00000385043 110 ntBASIC0.78□□□□□ -2.28
H3F3AP84243 AC092809.3-201ENST00000415453 231 ntBASIC0.78□□□□□ -2.28
H3F3AP84243 USP9YP21-201ENST00000420603 432 ntBASIC0.78□□□□□ -2.28
H3F3AP84243 MTCYBP5-201ENST00000423752 1135 ntBASIC0.78□□□□□ -2.28
H3F3AP84243 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC0.78□□□□□ -2.28
H3F3AP84243 TXNL1P1-201ENST00000429528 554 ntBASIC0.78□□□□□ -2.28
H3F3AP84243 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC0.78□□□□□ -2.28
H3F3AP84243 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.78□□□□□ -2.28
H3F3AP84243 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC0.78□□□□□ -2.28
H3F3AP84243 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.78□□□□□ -2.28
H3F3AP84243 AC113347.3-201ENST00000509113 148 ntBASIC0.78□□□□□ -2.28
H3F3AP84243 RNU5A-4P-201ENST00000516588 111 ntBASIC0.78□□□□□ -2.28
H3F3AP84243 RN7SKP88-201ENST00000516847 250 ntBASIC0.78□□□□□ -2.28
H3F3AP84243 RNU6-1092P-201ENST00000516955 87 ntBASIC0.78□□□□□ -2.28
H3F3AP84243 SUMO2P18-201ENST00000518873 252 ntBASIC0.78□□□□□ -2.28
H3F3AP84243 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.78□□□□□ -2.28
H3F3AP84243 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.78□□□□□ -2.28
H3F3AP84243 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.78□□□□□ -2.28
H3F3AP84243 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC0.78□□□□□ -2.28
H3F3AP84243 AL590229.1-201ENST00000603497 542 ntBASIC0.78□□□□□ -2.28
H3F3AP84243 MZT1P2-201ENST00000604387 248 ntBASIC0.78□□□□□ -2.28
H3F3AP84243 AC245297.2-201ENST00000610119 565 ntBASIC0.78□□□□□ -2.28
H3F3AP84243 7SK.8-201ENST00000612110 250 ntBASIC0.78□□□□□ -2.28
H3F3AP84243 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
H3F3AP84243 7SK.11-201ENST00000615477 250 ntBASIC0.78□□□□□ -2.28
H3F3AP84243 7SK.13-201ENST00000622040 250 ntBASIC0.78□□□□□ -2.28
H3F3AP84243 AC024940.5-201ENST00000622889 474 ntBASIC0.78□□□□□ -2.28
H3F3AP84243 AC068880.4-201ENST00000623082 495 ntBASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms