Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 AC005840.1-201ENST00000498412 377 ntBASIC0.79□□□□□ -2.28
HIST1H3AP68431 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC0.79□□□□□ -2.28
HIST1H3AP68431 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.79□□□□□ -2.28
HIST1H3AP68431 SNORA3.4-201ENST00000515969 96 ntBASIC0.79□□□□□ -2.28
HIST1H3AP68431 RNA5SP437-201ENST00000517249 129 ntBASIC0.79□□□□□ -2.28
HIST1H3AP68431 AP003355.1-201ENST00000518956 587 ntBASIC0.79□□□□□ -2.28
HIST1H3AP68431 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC0.79□□□□□ -2.28
HIST1H3AP68431 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC0.79□□□□□ -2.28
HIST1H3AP68431 AC087894.1-201ENST00000538359 518 ntBASIC0.79□□□□□ -2.28
HIST1H3AP68431 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.79□□□□□ -2.28
HIST1H3AP68431 AC015688.6-201ENST00000577737 104 ntBASIC0.79□□□□□ -2.28
HIST1H3AP68431 AP001004.1-201ENST00000582468 324 ntBASIC0.79□□□□□ -2.28
HIST1H3AP68431 BX284668.6-201ENST00000606899 438 ntBASIC0.79□□□□□ -2.28
HIST1H3AP68431 MIR15A-201ENST00000607334 83 ntBASIC0.79□□□□□ -2.28
HIST1H3AP68431 AL355816.2-201ENST00000610049 647 ntBASIC0.79□□□□□ -2.28
HIST1H3AP68431 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
HIST1H3AP68431 AL354696.1-201ENST00000614652 497 ntBASIC0.79□□□□□ -2.28
HIST1H3AP68431 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.79□□□□□ -2.28
HIST1H3AP68431 AL391516.1-201ENST00000554380 2449 ntBASIC0.79□□□□□ -2.28
HIST1H3AP68431 RNU6-968P-201ENST00000384076 107 ntBASIC0.78□□□□□ -2.28
HIST1H3AP68431 RNU6-1222P-201ENST00000384615 107 ntBASIC0.78□□□□□ -2.28
HIST1H3AP68431 MIR10A-201ENST00000385043 110 ntBASIC0.78□□□□□ -2.28
HIST1H3AP68431 AC092809.3-201ENST00000415453 231 ntBASIC0.78□□□□□ -2.28
HIST1H3AP68431 USP9YP21-201ENST00000420603 432 ntBASIC0.78□□□□□ -2.28
HIST1H3AP68431 MTCYBP5-201ENST00000423752 1135 ntBASIC0.78□□□□□ -2.28
HIST1H3AP68431 TXNL1P1-201ENST00000429528 554 ntBASIC0.78□□□□□ -2.28
HIST1H3AP68431 AC244505.5-201ENST00000443639 207 ntBASIC0.78□□□□□ -2.28
HIST1H3AP68431 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC0.78□□□□□ -2.28
HIST1H3AP68431 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC0.78□□□□□ -2.28
HIST1H3AP68431 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.78□□□□□ -2.28
HIST1H3AP68431 AC113347.3-201ENST00000509113 148 ntBASIC0.78□□□□□ -2.28
HIST1H3AP68431 AC108078.2-201ENST00000510750 236 ntBASIC0.78□□□□□ -2.28
HIST1H3AP68431 RNU5A-4P-201ENST00000516588 111 ntBASIC0.78□□□□□ -2.28
HIST1H3AP68431 RN7SKP88-201ENST00000516847 250 ntBASIC0.78□□□□□ -2.28
HIST1H3AP68431 RNU6-1092P-201ENST00000516955 87 ntBASIC0.78□□□□□ -2.28
HIST1H3AP68431 SUMO2P18-201ENST00000518873 252 ntBASIC0.78□□□□□ -2.28
HIST1H3AP68431 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.78□□□□□ -2.28
HIST1H3AP68431 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.78□□□□□ -2.28
HIST1H3AP68431 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC0.78□□□□□ -2.28
HIST1H3AP68431 AL590229.1-201ENST00000603497 542 ntBASIC0.78□□□□□ -2.28
HIST1H3AP68431 MZT1P2-201ENST00000604387 248 ntBASIC0.78□□□□□ -2.28
HIST1H3AP68431 AC245297.2-201ENST00000610119 565 ntBASIC0.78□□□□□ -2.28
HIST1H3AP68431 7SK.8-201ENST00000612110 250 ntBASIC0.78□□□□□ -2.28
HIST1H3AP68431 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
HIST1H3AP68431 7SK.11-201ENST00000615477 250 ntBASIC0.78□□□□□ -2.28
HIST1H3AP68431 7SK.13-201ENST00000622040 250 ntBASIC0.78□□□□□ -2.28
HIST1H3AP68431 AC024940.5-201ENST00000622889 474 ntBASIC0.78□□□□□ -2.28
HIST1H3AP68431 AC068880.4-201ENST00000623082 495 ntBASIC0.78□□□□□ -2.28
HIST1H3AP68431 SNORD56.1-201ENST00000362913 68 ntBASIC0.77□□□□□ -2.29
HIST1H3AP68431 Y_RNA.311-201ENST00000365068 96 ntBASIC0.77□□□□□ -2.29
HIST1H3AP68431 Y_RNA.332-201ENST00000365271 113 ntBASIC0.77□□□□□ -2.29
HIST1H3AP68431 RNU6-190P-201ENST00000384154 102 ntBASIC0.77□□□□□ -2.29
HIST1H3AP68431 SNORA29-201ENST00000384183 140 ntBASIC0.77□□□□□ -2.29
HIST1H3AP68431 SNORA25-201ENST00000384384 134 ntBASIC0.77□□□□□ -2.29
HIST1H3AP68431 RNU6ATAC15P-201ENST00000408279 121 ntBASIC0.77□□□□□ -2.29
HIST1H3AP68431 RN7SKP266-201ENST00000410232 287 ntBASIC0.77□□□□□ -2.29
HIST1H3AP68431 SNX2P2-201ENST00000424553 323 ntBASIC0.77□□□□□ -2.29
HIST1H3AP68431 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC0.77□□□□□ -2.29
HIST1H3AP68431 AL627311.1-201ENST00000431514 115 ntBASIC0.77□□□□□ -2.29
HIST1H3AP68431 FTH1P25-201ENST00000447665 469 ntBASIC0.77□□□□□ -2.29
HIST1H3AP68431 HMGN1P7-201ENST00000491722 313 ntBASIC0.77□□□□□ -2.29
HIST1H3AP68431 TRMT112P2-201ENST00000512910 132 ntBASIC0.77□□□□□ -2.29
HIST1H3AP68431 SNORA31.16-201ENST00000516773 139 ntBASIC0.77□□□□□ -2.29
HIST1H3AP68431 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC0.77□□□□□ -2.29
HIST1H3AP68431 AL512310.8-201ENST00000550183 120 ntBASIC0.77□□□□□ -2.29
HIST1H3AP68431 MIR6857-201ENST00000613267 93 ntBASIC0.77□□□□□ -2.29
HIST1H3AP68431 AL159153.1-201ENST00000619688 317 ntBASIC0.77□□□□□ -2.29
HIST1H3AP68431 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
HIST1H3AP68431 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC0.76□□□□□ -2.29
HIST1H3AP68431 MIR412-201ENST00000362142 91 ntBASIC0.76□□□□□ -2.29
HIST1H3AP68431 MIR222-201ENST00000384992 110 ntBASIC0.76□□□□□ -2.29
HIST1H3AP68431 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC0.76□□□□□ -2.29
HIST1H3AP68431 LARP1BP3-201ENST00000437229 869 ntBASIC0.76□□□□□ -2.29
HIST1H3AP68431 PRPS1P1-201ENST00000445305 876 ntBASIC0.76□□□□□ -2.29
HIST1H3AP68431 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.76□□□□□ -2.29
HIST1H3AP68431 MTCO3P27-201ENST00000514397 196 ntBASIC0.76□□□□□ -2.29
HIST1H3AP68431 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC0.76□□□□□ -2.29
HIST1H3AP68431 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.76□□□□□ -2.29
HIST1H3AP68431 BNIP3P26-201ENST00000600827 554 ntBASIC0.76□□□□□ -2.29
HIST1H3AP68431 AL391646.1-201ENST00000603860 190 ntBASIC0.76□□□□□ -2.29
HIST1H3AP68431 FAM71BP1-201ENST00000604431 523 ntBASIC0.76□□□□□ -2.29
HIST1H3AP68431 AC069114.2-201ENST00000604699 304 ntBASIC0.76□□□□□ -2.29
HIST1H3AP68431 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
HIST1H3AP68431 SCARNA4-202ENST00000625402 129 ntBASIC0.76□□□□□ -2.29
HIST1H3AP68431 AL133216.2-202ENST00000634512 349 ntBASIC0.76□□□□□ -2.29
HIST1H3AP68431 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC0.76□□□□□ -2.29
HIST1H3AP68431 OR4G2P-201ENST00000328113 903 ntBASIC0.75□□□□□ -2.29
HIST1H3AP68431 RNU1-124P-201ENST00000363861 145 ntBASIC0.75□□□□□ -2.29
HIST1H3AP68431 RNU6-331P-201ENST00000384724 107 ntBASIC0.75□□□□□ -2.29
HIST1H3AP68431 RPS3AP36-201ENST00000398190 775 ntBASIC0.75□□□□□ -2.29
HIST1H3AP68431 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC0.75□□□□□ -2.29
HIST1H3AP68431 CYCSP33-201ENST00000414485 327 ntBASIC0.75□□□□□ -2.29
HIST1H3AP68431 ELOCP17-201ENST00000414751 326 ntBASIC0.75□□□□□ -2.29
HIST1H3AP68431 ELOCP9-201ENST00000418624 239 ntBASIC0.75□□□□□ -2.29
HIST1H3AP68431 TIMM9P1-201ENST00000436122 256 ntBASIC0.75□□□□□ -2.29
HIST1H3AP68431 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC0.75□□□□□ -2.29
HIST1H3AP68431 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC0.75□□□□□ -2.29
HIST1H3AP68431 AL122001.1-201ENST00000457027 370 ntBASIC0.75□□□□□ -2.29
HIST1H3AP68431 AC006026.2-201ENST00000457376 180 ntBASIC0.75□□□□□ -2.29
HIST1H3AP68431 snoU13.30-201ENST00000458951 104 ntBASIC0.75□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 142.9 ms