Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 VDAC1P3-201ENST00000434069 851 ntBASIC3.74□□□□□ -1.81
YBX1P67809 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
YBX1P67809 AL500522.2-201ENST00000448562 343 ntBASIC3.74□□□□□ -1.81
YBX1P67809 Y_RNA.638-201ENST00000459374 113 ntBASIC3.74□□□□□ -1.81
YBX1P67809 AC073901.1-201ENST00000462471 408 ntBASIC3.74□□□□□ -1.81
YBX1P67809 RN7SL323P-201ENST00000494712 295 ntBASIC3.74□□□□□ -1.81
YBX1P67809 RNU6-1114P-201ENST00000516022 107 ntBASIC3.74□□□□□ -1.81
YBX1P67809 SNORA43.2-201ENST00000516652 128 ntBASIC3.74□□□□□ -1.81
YBX1P67809 MTND5P41-201ENST00000517498 206 ntBASIC3.74□□□□□ -1.81
YBX1P67809 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
YBX1P67809 AC027288.2-201ENST00000553028 243 ntBASIC3.74□□□□□ -1.81
YBX1P67809 MIR4782-201ENST00000577987 79 ntBASIC3.74□□□□□ -1.81
YBX1P67809 AL590240.4-201ENST00000616908 390 ntBASIC3.74□□□□□ -1.81
YBX1P67809 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.74□□□□□ -1.81
YBX1P67809 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.74□□□□□ -1.81
YBX1P67809 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.74□□□□□ -1.81
YBX1P67809 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.74□□□□□ -1.81
YBX1P67809 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.73□□□□□ -1.81
YBX1P67809 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
YBX1P67809 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
YBX1P67809 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.73□□□□□ -1.81
YBX1P67809 AC073073.2-201ENST00000609827 2578 ntBASIC3.73□□□□□ -1.81
YBX1P67809 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
YBX1P67809 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.73□□□□□ -1.81
YBX1P67809 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
YBX1P67809 RNU6-626P-201ENST00000363354 107 ntBASIC3.73□□□□□ -1.81
YBX1P67809 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.73□□□□□ -1.81
YBX1P67809 Y_RNA.383-201ENST00000383855 97 ntBASIC3.73□□□□□ -1.81
YBX1P67809 Y_RNA.418-201ENST00000384029 102 ntBASIC3.73□□□□□ -1.81
YBX1P67809 RNU1-139P-201ENST00000391307 165 ntBASIC3.73□□□□□ -1.81
YBX1P67809 EIF1AXP1-201ENST00000419267 435 ntBASIC3.73□□□□□ -1.81
YBX1P67809 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC3.73□□□□□ -1.81
YBX1P67809 AC087477.1-201ENST00000465747 340 ntBASIC3.73□□□□□ -1.81
YBX1P67809 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC3.73□□□□□ -1.81
YBX1P67809 RNA5SP468-201ENST00000516782 93 ntBASIC3.73□□□□□ -1.81
YBX1P67809 AC022695.1-201ENST00000522089 237 ntBASIC3.73□□□□□ -1.81
YBX1P67809 AK6P2-201ENST00000549020 471 ntBASIC3.73□□□□□ -1.81
YBX1P67809 AC090877.1-201ENST00000561418 344 ntBASIC3.73□□□□□ -1.81
YBX1P67809 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.73□□□□□ -1.81
YBX1P67809 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.73□□□□□ -1.81
YBX1P67809 AP001485.1-201ENST00000604799 199 ntBASIC3.73□□□□□ -1.81
YBX1P67809 AC011921.3-201ENST00000605540 361 ntBASIC3.73□□□□□ -1.81
YBX1P67809 AC069200.1-201ENST00000609511 323 ntBASIC3.73□□□□□ -1.81
YBX1P67809 AC005296.1-201ENST00000616145 209 ntBASIC3.73□□□□□ -1.81
YBX1P67809 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC3.73□□□□□ -1.81
YBX1P67809 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.73□□□□□ -1.81
YBX1P67809 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.73□□□□□ -1.81
YBX1P67809 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
YBX1P67809 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.73□□□□□ -1.81
YBX1P67809 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
YBX1P67809 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.73□□□□□ -1.81
YBX1P67809 BX322639.1-202ENST00000423987 2213 ntBASIC3.72□□□□□ -1.81
YBX1P67809 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.72□□□□□ -1.81
YBX1P67809 AL353743.1-202ENST00000431724 1695 ntBASIC3.72□□□□□ -1.81
YBX1P67809 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
YBX1P67809 AC008725.1-201ENST00000605123 2263 ntBASIC3.72□□□□□ -1.81
YBX1P67809 MFSD8-236ENST00000641509 4050 ntBASIC3.72□□□□□ -1.81
YBX1P67809 U1.1-201ENST00000384101 164 ntBASIC3.72□□□□□ -1.81
YBX1P67809 SNORA9-201ENST00000384215 133 ntBASIC3.72□□□□□ -1.81
YBX1P67809 RNU6-918P-201ENST00000391219 106 ntBASIC3.72□□□□□ -1.81
YBX1P67809 U3.37-201ENST00000408528 213 ntBASIC3.72□□□□□ -1.81
YBX1P67809 RNU6-1245P-201ENST00000411130 106 ntBASIC3.72□□□□□ -1.81
YBX1P67809 RNA5SP31-201ENST00000411144 127 ntBASIC3.72□□□□□ -1.81
YBX1P67809 TOMM22P1-201ENST00000418578 312 ntBASIC3.72□□□□□ -1.81
YBX1P67809 YME1L1P1-201ENST00000429435 297 ntBASIC3.72□□□□□ -1.81
YBX1P67809 SNRPEP9-201ENST00000436794 238 ntBASIC3.72□□□□□ -1.81
YBX1P67809 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.72□□□□□ -1.81
YBX1P67809 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.72□□□□□ -1.81
YBX1P67809 AC006026.2-201ENST00000457376 180 ntBASIC3.72□□□□□ -1.81
YBX1P67809 AP001025.1-201ENST00000486139 332 ntBASIC3.72□□□□□ -1.81
YBX1P67809 AF186996.7-201ENST00000492781 209 ntBASIC3.72□□□□□ -1.81
YBX1P67809 AC091959.1-201ENST00000495857 238 ntBASIC3.72□□□□□ -1.81
YBX1P67809 UBE2CP3-201ENST00000502715 450 ntBASIC3.72□□□□□ -1.81
YBX1P67809 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.72□□□□□ -1.81
YBX1P67809 RNA5SP208-201ENST00000516156 78 ntBASIC3.72□□□□□ -1.81
YBX1P67809 MRPS18CP4-201ENST00000535821 231 ntBASIC3.72□□□□□ -1.81
YBX1P67809 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC3.72□□□□□ -1.81
YBX1P67809 TRAV28-201ENST00000557548 323 ntBASIC3.72□□□□□ -1.81
YBX1P67809 HSPE1P5-201ENST00000561489 272 ntBASIC3.72□□□□□ -1.81
YBX1P67809 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.72□□□□□ -1.81
YBX1P67809 MIR3144-201ENST00000579460 79 ntBASIC3.72□□□□□ -1.81
YBX1P67809 MIR5695-201ENST00000579717 85 ntBASIC3.72□□□□□ -1.81
YBX1P67809 MIR4282-201ENST00000583613 67 ntBASIC3.72□□□□□ -1.81
YBX1P67809 AC008749.1-201ENST00000597650 306 ntBASIC3.72□□□□□ -1.81
YBX1P67809 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.72□□□□□ -1.81
YBX1P67809 AL354798.1-201ENST00000622505 329 ntBASIC3.72□□□□□ -1.81
YBX1P67809 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.72□□□□□ -1.81
YBX1P67809 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.72□□□□□ -1.81
YBX1P67809 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.72□□□□□ -1.81
YBX1P67809 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
YBX1P67809 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
YBX1P67809 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
YBX1P67809 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
YBX1P67809 RNU6-600P-201ENST00000362524 99 ntBASIC3.71□□□□□ -1.82
YBX1P67809 Y_RNA.240-201ENST00000364469 95 ntBASIC3.71□□□□□ -1.82
YBX1P67809 RNU6-1289P-201ENST00000384431 106 ntBASIC3.71□□□□□ -1.82
YBX1P67809 MIR634-201ENST00000385208 97 ntBASIC3.71□□□□□ -1.82
YBX1P67809 RNA5SP213-201ENST00000391031 106 ntBASIC3.71□□□□□ -1.82
YBX1P67809 SNORA71B-202ENST00000439232 272 ntBASIC3.71□□□□□ -1.82
YBX1P67809 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms