Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 RNU6-586P-201ENST00000517265 104 ntBASIC3.14□□□□□ -1.91
RHBDL3P58872 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC3.14□□□□□ -1.91
RHBDL3P58872 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.14□□□□□ -1.91
RHBDL3P58872 AC078814.3-201ENST00000553036 491 ntBASIC3.14□□□□□ -1.91
RHBDL3P58872 MIR4658-201ENST00000584344 65 ntBASIC3.14□□□□□ -1.91
RHBDL3P58872 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC3.14□□□□□ -1.91
RHBDL3P58872 AL159153.1-201ENST00000619688 317 ntBASIC3.14□□□□□ -1.91
RHBDL3P58872 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
RHBDL3P58872 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
RHBDL3P58872 RNU6-827P-201ENST00000365553 106 ntBASIC3.13□□□□□ -1.91
RHBDL3P58872 Y_RNA.516-201ENST00000384541 124 ntBASIC3.13□□□□□ -1.91
RHBDL3P58872 MIR29B2-201ENST00000385055 81 ntBASIC3.13□□□□□ -1.91
RHBDL3P58872 MIR561-201ENST00000385216 97 ntBASIC3.13□□□□□ -1.91
RHBDL3P58872 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
RHBDL3P58872 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.13□□□□□ -1.91
RHBDL3P58872 RNU6-373P-201ENST00000411247 98 ntBASIC3.13□□□□□ -1.91
RHBDL3P58872 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC3.13□□□□□ -1.91
RHBDL3P58872 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC3.13□□□□□ -1.91
RHBDL3P58872 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
RHBDL3P58872 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.13□□□□□ -1.91
RHBDL3P58872 RPL39P40-201ENST00000445481 146 ntBASIC3.13□□□□□ -1.91
RHBDL3P58872 AC090515.1-201ENST00000465295 476 ntBASIC3.13□□□□□ -1.91
RHBDL3P58872 RNU6-1038P-201ENST00000516516 104 ntBASIC3.13□□□□□ -1.91
RHBDL3P58872 RNU6-323P-201ENST00000521915 107 ntBASIC3.13□□□□□ -1.91
RHBDL3P58872 AC243972.3-201ENST00000539655 198 ntBASIC3.13□□□□□ -1.91
RHBDL3P58872 IMMP1LP2-201ENST00000552954 492 ntBASIC3.13□□□□□ -1.91
RHBDL3P58872 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.13□□□□□ -1.91
RHBDL3P58872 AC009314.1-201ENST00000603871 304 ntBASIC3.13□□□□□ -1.91
RHBDL3P58872 AC107304.1-201ENST00000604229 296 ntBASIC3.13□□□□□ -1.91
RHBDL3P58872 RNU6-89P-201ENST00000606519 100 ntBASIC3.13□□□□□ -1.91
RHBDL3P58872 AL357078.3-201ENST00000607528 618 ntBASIC3.13□□□□□ -1.91
RHBDL3P58872 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.13□□□□□ -1.91
RHBDL3P58872 AC097372.5-201ENST00000623665 376 ntBASIC3.13□□□□□ -1.91
RHBDL3P58872 AC009487.2-201ENST00000420969 6821 ntBASIC3.13□□□□□ -1.91
RHBDL3P58872 MTND5P19-201ENST00000424872 1794 ntBASIC3.12□□□□□ -1.91
RHBDL3P58872 RNU6-1141P-201ENST00000364520 107 ntBASIC3.12□□□□□ -1.91
RHBDL3P58872 MIR181B1-201ENST00000385240 110 ntBASIC3.12□□□□□ -1.91
RHBDL3P58872 AL139095.1-201ENST00000404326 391 ntBASIC3.12□□□□□ -1.91
RHBDL3P58872 RN7SKP158-201ENST00000410453 326 ntBASIC3.12□□□□□ -1.91
RHBDL3P58872 AC007064.1-201ENST00000412238 351 ntBASIC3.12□□□□□ -1.91
RHBDL3P58872 MTCO1P21-201ENST00000416634 589 ntBASIC3.12□□□□□ -1.91
RHBDL3P58872 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.12□□□□□ -1.91
RHBDL3P58872 AL590556.1-201ENST00000423231 483 ntBASIC3.12□□□□□ -1.91
RHBDL3P58872 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.12□□□□□ -1.91
RHBDL3P58872 AC243964.1-201ENST00000441814 261 ntBASIC3.12□□□□□ -1.91
RHBDL3P58872 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.12□□□□□ -1.91
RHBDL3P58872 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
RHBDL3P58872 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC3.12□□□□□ -1.91
RHBDL3P58872 RNU6-1037P-201ENST00000459571 107 ntBASIC3.12□□□□□ -1.91
RHBDL3P58872 AC087884.1-201ENST00000469738 328 ntBASIC3.12□□□□□ -1.91
RHBDL3P58872 RPL30P1-201ENST00000488676 339 ntBASIC3.12□□□□□ -1.91
RHBDL3P58872 AC022447.4-201ENST00000504053 364 ntBASIC3.12□□□□□ -1.91
RHBDL3P58872 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.12□□□□□ -1.91
RHBDL3P58872 SNORA9.3-201ENST00000516383 129 ntBASIC3.12□□□□□ -1.91
RHBDL3P58872 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.12□□□□□ -1.91
RHBDL3P58872 AC091544.4-201ENST00000555268 342 ntBASIC3.12□□□□□ -1.91
RHBDL3P58872 AL118558.2-201ENST00000556294 238 ntBASIC3.12□□□□□ -1.91
RHBDL3P58872 AC093249.1-201ENST00000567049 203 ntBASIC3.12□□□□□ -1.91
RHBDL3P58872 MIR4635-201ENST00000583759 79 ntBASIC3.12□□□□□ -1.91
RHBDL3P58872 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.12□□□□□ -1.91
RHBDL3P58872 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.12□□□□□ -1.91
RHBDL3P58872 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
RHBDL3P58872 AP000560.1-201ENST00000624150 1937 ntBASIC3.11□□□□□ -1.91
RHBDL3P58872 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
RHBDL3P58872 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
RHBDL3P58872 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
RHBDL3P58872 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
RHBDL3P58872 RNU6-428P-201ENST00000362942 107 ntBASIC3.11□□□□□ -1.91
RHBDL3P58872 RNU4-12P-201ENST00000365233 139 ntBASIC3.11□□□□□ -1.91
RHBDL3P58872 Y_RNA.450-201ENST00000384198 113 ntBASIC3.11□□□□□ -1.91
RHBDL3P58872 MIR524-201ENST00000385242 87 ntBASIC3.11□□□□□ -1.91
RHBDL3P58872 AC244505.4-201ENST00000434905 287 ntBASIC3.11□□□□□ -1.91
RHBDL3P58872 SSXP5-201ENST00000443473 287 ntBASIC3.11□□□□□ -1.91
RHBDL3P58872 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.11□□□□□ -1.91
RHBDL3P58872 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.11□□□□□ -1.91
RHBDL3P58872 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC3.11□□□□□ -1.91
RHBDL3P58872 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.11□□□□□ -1.91
RHBDL3P58872 RNA5SP320-201ENST00000516263 124 ntBASIC3.11□□□□□ -1.91
RHBDL3P58872 RN7SKP256-201ENST00000517201 314 ntBASIC3.11□□□□□ -1.91
RHBDL3P58872 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC3.11□□□□□ -1.91
RHBDL3P58872 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC3.11□□□□□ -1.91
RHBDL3P58872 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC3.11□□□□□ -1.91
RHBDL3P58872 MIR4435-1-201ENST00000582552 80 ntBASIC3.11□□□□□ -1.91
RHBDL3P58872 AC010525.2-201ENST00000590920 195 ntBASIC3.11□□□□□ -1.91
RHBDL3P58872 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
RHBDL3P58872 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
RHBDL3P58872 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.1□□□□□ -1.91
RHBDL3P58872 RNU6-214P-201ENST00000384130 107 ntBASIC3.1□□□□□ -1.91
RHBDL3P58872 MIR518C-201ENST00000384822 101 ntBASIC3.1□□□□□ -1.91
RHBDL3P58872 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC3.1□□□□□ -1.91
RHBDL3P58872 AIMP1P2-201ENST00000425294 312 ntBASIC3.1□□□□□ -1.91
RHBDL3P58872 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.1□□□□□ -1.91
RHBDL3P58872 AC011816.1-201ENST00000441346 546 ntBASIC3.1□□□□□ -1.91
RHBDL3P58872 AC009238.1-201ENST00000442165 424 ntBASIC3.1□□□□□ -1.91
RHBDL3P58872 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.1□□□□□ -1.91
RHBDL3P58872 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.1□□□□□ -1.91
RHBDL3P58872 AC009237.6-201ENST00000446969 424 ntBASIC3.1□□□□□ -1.91
RHBDL3P58872 TRBVA-201ENST00000498804 316 ntBASIC3.1□□□□□ -1.91
RHBDL3P58872 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.1□□□□□ -1.91
RHBDL3P58872 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms