Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 HIF1AP1-201ENST00000553642 175 ntBASIC1.93□□□□□ -2.1
LIM2P55344 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC1.93□□□□□ -2.1
LIM2P55344 MTATP6P3-201ENST00000581686 676 ntBASIC1.93□□□□□ -2.1
LIM2P55344 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.93□□□□□ -2.1
LIM2P55344 AC004223.2-201ENST00000590309 544 ntBASIC1.93□□□□□ -2.1
LIM2P55344 AL713866.2-201ENST00000603579 219 ntBASIC1.93□□□□□ -2.1
LIM2P55344 Z82243.1-201ENST00000609432 473 ntBASIC1.93□□□□□ -2.1
LIM2P55344 AC104073.3-201ENST00000610942 955 ntBASIC1.93□□□□□ -2.1
LIM2P55344 Y_RNA.783-201ENST00000613546 102 ntBASIC1.93□□□□□ -2.1
LIM2P55344 AC245884.12-201ENST00000615364 59 ntBASIC1.93□□□□□ -2.1
LIM2P55344 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
LIM2P55344 MTND5P26-201ENST00000426018 1752 ntBASIC1.93□□□□□ -2.1
LIM2P55344 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
LIM2P55344 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
LIM2P55344 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.92□□□□□ -2.1
LIM2P55344 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
LIM2P55344 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
LIM2P55344 RNU6-1210P-201ENST00000363775 107 ntBASIC1.92□□□□□ -2.1
LIM2P55344 Y_RNA.255-201ENST00000364581 97 ntBASIC1.92□□□□□ -2.1
LIM2P55344 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
LIM2P55344 RNU6-259P-201ENST00000383999 107 ntBASIC1.92□□□□□ -2.1
LIM2P55344 MIR144-201ENST00000384886 86 ntBASIC1.92□□□□□ -2.1
LIM2P55344 RNU6-1158P-201ENST00000391167 107 ntBASIC1.92□□□□□ -2.1
LIM2P55344 AL133475.1-201ENST00000404414 305 ntBASIC1.92□□□□□ -2.1
LIM2P55344 SNORA11.2-201ENST00000408318 127 ntBASIC1.92□□□□□ -2.1
LIM2P55344 RNU2-66P-201ENST00000410650 161 ntBASIC1.92□□□□□ -2.1
LIM2P55344 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.92□□□□□ -2.1
LIM2P55344 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.92□□□□□ -2.1
LIM2P55344 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.92□□□□□ -2.1
LIM2P55344 AC027124.2-201ENST00000428249 105 ntBASIC1.92□□□□□ -2.1
LIM2P55344 AL445646.1-201ENST00000431784 216 ntBASIC1.92□□□□□ -2.1
LIM2P55344 AC013470.1-201ENST00000453438 462 ntBASIC1.92□□□□□ -2.1
LIM2P55344 RNU6-261P-201ENST00000459506 102 ntBASIC1.92□□□□□ -2.1
LIM2P55344 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC1.92□□□□□ -2.1
LIM2P55344 AC083798.1-201ENST00000472671 131 ntBASIC1.92□□□□□ -2.1
LIM2P55344 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.92□□□□□ -2.1
LIM2P55344 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC1.92□□□□□ -2.1
LIM2P55344 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.92□□□□□ -2.1
LIM2P55344 RNU2-53P-201ENST00000516257 147 ntBASIC1.92□□□□□ -2.1
LIM2P55344 SNORA25.17-201ENST00000517184 124 ntBASIC1.92□□□□□ -2.1
LIM2P55344 IMMP1LP2-201ENST00000552954 492 ntBASIC1.92□□□□□ -2.1
LIM2P55344 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC1.92□□□□□ -2.1
LIM2P55344 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.92□□□□□ -2.1
LIM2P55344 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.92□□□□□ -2.1
LIM2P55344 AL159153.1-201ENST00000619688 317 ntBASIC1.92□□□□□ -2.1
LIM2P55344 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
LIM2P55344 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.92□□□□□ -2.1
LIM2P55344 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
LIM2P55344 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
LIM2P55344 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
LIM2P55344 RNU6-655P-201ENST00000362858 107 ntBASIC1.91□□□□□ -2.1
LIM2P55344 RNU6-1322P-201ENST00000364309 107 ntBASIC1.91□□□□□ -2.1
LIM2P55344 RNU4-24P-201ENST00000364565 139 ntBASIC1.91□□□□□ -2.1
LIM2P55344 CBX3P9-201ENST00000402326 552 ntBASIC1.91□□□□□ -2.1
LIM2P55344 RNU2-2P-201ENST00000410396 191 ntBASIC1.91□□□□□ -2.1
LIM2P55344 AC008267.5-201ENST00000424928 265 ntBASIC1.91□□□□□ -2.1
LIM2P55344 AL591043.1-201ENST00000432461 424 ntBASIC1.91□□□□□ -2.1
LIM2P55344 AC007969.2-201ENST00000441891 191 ntBASIC1.91□□□□□ -2.1
LIM2P55344 AC124916.1-201ENST00000444020 547 ntBASIC1.91□□□□□ -2.1
LIM2P55344 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.91□□□□□ -2.1
LIM2P55344 IFNA11P-201ENST00000446352 526 ntBASIC1.91□□□□□ -2.1
LIM2P55344 CKS1BP2-201ENST00000497342 240 ntBASIC1.91□□□□□ -2.1
LIM2P55344 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.91□□□□□ -2.1
LIM2P55344 HMGB3P3-201ENST00000510526 400 ntBASIC1.91□□□□□ -2.1
LIM2P55344 RN7SKP256-201ENST00000517201 314 ntBASIC1.91□□□□□ -2.1
LIM2P55344 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.91□□□□□ -2.1
LIM2P55344 AP003392.2-201ENST00000527269 208 ntBASIC1.91□□□□□ -2.1
LIM2P55344 CYCSP27-201ENST00000527643 293 ntBASIC1.91□□□□□ -2.1
LIM2P55344 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC1.91□□□□□ -2.1
LIM2P55344 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.91□□□□□ -2.1
LIM2P55344 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.91□□□□□ -2.1
LIM2P55344 BNIP3P16-201ENST00000589779 534 ntBASIC1.91□□□□□ -2.1
LIM2P55344 AC002984.1-201ENST00000591692 448 ntBASIC1.91□□□□□ -2.1
LIM2P55344 AC009314.1-201ENST00000603871 304 ntBASIC1.91□□□□□ -2.1
LIM2P55344 AC080013.6-201ENST00000606185 215 ntBASIC1.91□□□□□ -2.1
LIM2P55344 SNORD14A-201ENST00000606526 91 ntBASIC1.91□□□□□ -2.1
LIM2P55344 U2.17-201ENST00000611454 95 ntBASIC1.91□□□□□ -2.1
LIM2P55344 U2.15-201ENST00000611544 191 ntBASIC1.91□□□□□ -2.1
LIM2P55344 Z99129.1-201ENST00000612510 255 ntBASIC1.91□□□□□ -2.1
LIM2P55344 U2.16-201ENST00000613119 191 ntBASIC1.91□□□□□ -2.1
LIM2P55344 U2.12-201ENST00000613778 191 ntBASIC1.91□□□□□ -2.1
LIM2P55344 U2.20-201ENST00000613956 192 ntBASIC1.91□□□□□ -2.1
LIM2P55344 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
LIM2P55344 U2.9-201ENST00000615427 191 ntBASIC1.91□□□□□ -2.1
LIM2P55344 U2.11-201ENST00000616345 191 ntBASIC1.91□□□□□ -2.1
LIM2P55344 U2.2-201ENST00000616535 191 ntBASIC1.91□□□□□ -2.1
LIM2P55344 U2.3-201ENST00000617785 191 ntBASIC1.91□□□□□ -2.1
LIM2P55344 U2.19-201ENST00000618602 191 ntBASIC1.91□□□□□ -2.1
LIM2P55344 RNU2-1-201ENST00000618664 191 ntBASIC1.91□□□□□ -2.1
LIM2P55344 U2.6-201ENST00000619225 191 ntBASIC1.91□□□□□ -2.1
LIM2P55344 U2.5-201ENST00000619465 191 ntBASIC1.91□□□□□ -2.1
LIM2P55344 U2.10-201ENST00000620268 191 ntBASIC1.91□□□□□ -2.1
LIM2P55344 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
LIM2P55344 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.91□□□□□ -2.1
LIM2P55344 RNU6-105P-201ENST00000363909 104 ntBASIC1.9□□□□□ -2.11
LIM2P55344 RNU6-82P-201ENST00000363970 107 ntBASIC1.9□□□□□ -2.11
LIM2P55344 RNU6-1222P-201ENST00000384615 107 ntBASIC1.9□□□□□ -2.11
LIM2P55344 MIR561-201ENST00000385216 97 ntBASIC1.9□□□□□ -2.11
LIM2P55344 AL353193.1-201ENST00000421444 268 ntBASIC1.9□□□□□ -2.11
LIM2P55344 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms