Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
CDH11P55287 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
CDH11P55287 RNU6-843P-201ENST00000384454 104 ntBASIC2.47□□□□□ -2.01
CDH11P55287 RNA5SP354-201ENST00000391247 136 ntBASIC2.47□□□□□ -2.01
CDH11P55287 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.47□□□□□ -2.01
CDH11P55287 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.47□□□□□ -2.01
CDH11P55287 UBE2V1P4-201ENST00000425374 344 ntBASIC2.47□□□□□ -2.01
CDH11P55287 MTCO2P3-201ENST00000442543 421 ntBASIC2.47□□□□□ -2.01
CDH11P55287 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.47□□□□□ -2.01
CDH11P55287 RPS29P12-201ENST00000460178 152 ntBASIC2.47□□□□□ -2.01
CDH11P55287 MED28P2-201ENST00000475771 317 ntBASIC2.47□□□□□ -2.01
CDH11P55287 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.47□□□□□ -2.01
CDH11P55287 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.47□□□□□ -2.01
CDH11P55287 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.47□□□□□ -2.01
CDH11P55287 RNU5B-3P-201ENST00000516601 115 ntBASIC2.47□□□□□ -2.01
CDH11P55287 RNU6-566P-201ENST00000516790 107 ntBASIC2.47□□□□□ -2.01
CDH11P55287 Y_RNA.702-201ENST00000516843 96 ntBASIC2.47□□□□□ -2.01
CDH11P55287 SNORA31.23-201ENST00000517219 133 ntBASIC2.47□□□□□ -2.01
CDH11P55287 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.47□□□□□ -2.01
CDH11P55287 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.47□□□□□ -2.01
CDH11P55287 MIR4319-201ENST00000577285 85 ntBASIC2.47□□□□□ -2.01
CDH11P55287 RPL23AP78-201ENST00000599928 470 ntBASIC2.47□□□□□ -2.01
CDH11P55287 RPL12P50-201ENST00000603116 116 ntBASIC2.47□□□□□ -2.01
CDH11P55287 AL022345.1-201ENST00000607292 135 ntBASIC2.47□□□□□ -2.01
CDH11P55287 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.47□□□□□ -2.01
CDH11P55287 AC093913.1-201ENST00000614178 329 ntBASIC2.47□□□□□ -2.01
CDH11P55287 AC104260.1-201ENST00000616660 539 ntBASIC2.47□□□□□ -2.01
CDH11P55287 UCA1.1-201ENST00000620952 75 ntBASIC2.47□□□□□ -2.01
CDH11P55287 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.47□□□□□ -2.01
CDH11P55287 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.47□□□□□ -2.01
CDH11P55287 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.47□□□□□ -2.01
CDH11P55287 AC004944.1-201ENST00000517807 3059 ntBASIC2.46□□□□□ -2.02
CDH11P55287 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
CDH11P55287 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
CDH11P55287 RNU6-336P-201ENST00000364891 107 ntBASIC2.46□□□□□ -2.02
CDH11P55287 RNU6-827P-201ENST00000365553 106 ntBASIC2.46□□□□□ -2.02
CDH11P55287 RNU6-622P-201ENST00000384272 103 ntBASIC2.46□□□□□ -2.02
CDH11P55287 SNORD116-20-201ENST00000384529 92 ntBASIC2.46□□□□□ -2.02
CDH11P55287 RNU6-748P-201ENST00000384648 107 ntBASIC2.46□□□□□ -2.02
CDH11P55287 RNU6-95P-201ENST00000384697 107 ntBASIC2.46□□□□□ -2.02
CDH11P55287 RNU6-19P-201ENST00000384718 107 ntBASIC2.46□□□□□ -2.02
CDH11P55287 AL356432.1-201ENST00000405809 419 ntBASIC2.46□□□□□ -2.02
CDH11P55287 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.46□□□□□ -2.02
CDH11P55287 AC074117.2-201ENST00000417130 397 ntBASIC2.46□□□□□ -2.02
CDH11P55287 AL590632.1-201ENST00000424289 371 ntBASIC2.46□□□□□ -2.02
CDH11P55287 TOMM20P4-201ENST00000427861 435 ntBASIC2.46□□□□□ -2.02
CDH11P55287 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.46□□□□□ -2.02
CDH11P55287 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.46□□□□□ -2.02
CDH11P55287 AC007969.2-201ENST00000441891 191 ntBASIC2.46□□□□□ -2.02
CDH11P55287 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.46□□□□□ -2.02
CDH11P55287 OSTCP8-201ENST00000445117 448 ntBASIC2.46□□□□□ -2.02
CDH11P55287 MTND1P17-201ENST00000448961 204 ntBASIC2.46□□□□□ -2.02
CDH11P55287 AP000705.1-201ENST00000454567 350 ntBASIC2.46□□□□□ -2.02
CDH11P55287 RPL31P41-201ENST00000477967 372 ntBASIC2.46□□□□□ -2.02
CDH11P55287 RPL23AP94-201ENST00000512518 302 ntBASIC2.46□□□□□ -2.02
CDH11P55287 MRPS36P2-201ENST00000512569 299 ntBASIC2.46□□□□□ -2.02
CDH11P55287 SNORA31.6-201ENST00000516241 130 ntBASIC2.46□□□□□ -2.02
CDH11P55287 Y_RNA.691-201ENST00000516611 103 ntBASIC2.46□□□□□ -2.02
CDH11P55287 RNA5SP454-201ENST00000517231 127 ntBASIC2.46□□□□□ -2.02
CDH11P55287 AP005639.2-201ENST00000527592 928 ntBASIC2.46□□□□□ -2.02
CDH11P55287 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
CDH11P55287 AC004486.1-201ENST00000546846 233 ntBASIC2.46□□□□□ -2.02
CDH11P55287 AC026371.1-201ENST00000551867 419 ntBASIC2.46□□□□□ -2.02
CDH11P55287 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.46□□□□□ -2.02
CDH11P55287 MIR3670-2-201ENST00000582974 65 ntBASIC2.46□□□□□ -2.02
CDH11P55287 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.46□□□□□ -2.02
CDH11P55287 MIR3670-1-201ENST00000584160 65 ntBASIC2.46□□□□□ -2.02
CDH11P55287 MIR3670-3-201ENST00000584855 65 ntBASIC2.46□□□□□ -2.02
CDH11P55287 AC091135.1-201ENST00000585943 307 ntBASIC2.46□□□□□ -2.02
CDH11P55287 AC005498.1-201ENST00000592125 465 ntBASIC2.46□□□□□ -2.02
CDH11P55287 VN1R107P-201ENST00000601784 209 ntBASIC2.46□□□□□ -2.02
CDH11P55287 AC009314.1-201ENST00000603871 304 ntBASIC2.46□□□□□ -2.02
CDH11P55287 AL121917.1-203ENST00000605534 577 ntBASIC2.46□□□□□ -2.02
CDH11P55287 MIR3670-4-201ENST00000612260 65 ntBASIC2.46□□□□□ -2.02
CDH11P55287 AC104237.2-201ENST00000612456 443 ntBASIC2.46□□□□□ -2.02
CDH11P55287 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.46□□□□□ -2.02
CDH11P55287 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
CDH11P55287 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
CDH11P55287 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
CDH11P55287 AL355596.1-201ENST00000565399 3996 ntBASIC2.46□□□□□ -2.02
CDH11P55287 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.46□□□□□ -2.02
CDH11P55287 HAUS6P2-201ENST00000433254 2404 ntBASIC2.46□□□□□ -2.02
CDH11P55287 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.45□□□□□ -2.02
CDH11P55287 RNU6-867P-201ENST00000364956 107 ntBASIC2.45□□□□□ -2.02
CDH11P55287 RNU6-487P-201ENST00000365430 104 ntBASIC2.45□□□□□ -2.02
CDH11P55287 RNU6-214P-201ENST00000384130 107 ntBASIC2.45□□□□□ -2.02
CDH11P55287 RNU6-1013P-201ENST00000384180 107 ntBASIC2.45□□□□□ -2.02
CDH11P55287 AL360182.1-201ENST00000397433 468 ntBASIC2.45□□□□□ -2.02
CDH11P55287 MIR548K-201ENST00000408406 116 ntBASIC2.45□□□□□ -2.02
CDH11P55287 AL358075.3-201ENST00000426289 226 ntBASIC2.45□□□□□ -2.02
CDH11P55287 AL645568.3-201ENST00000433683 316 ntBASIC2.45□□□□□ -2.02
CDH11P55287 HMGB1P18-201ENST00000438801 619 ntBASIC2.45□□□□□ -2.02
CDH11P55287 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.45□□□□□ -2.02
CDH11P55287 PPP1R2P5-201ENST00000457256 603 ntBASIC2.45□□□□□ -2.02
CDH11P55287 AC090525.1-201ENST00000479116 478 ntBASIC2.45□□□□□ -2.02
CDH11P55287 AC103851.1-201ENST00000506833 274 ntBASIC2.45□□□□□ -2.02
CDH11P55287 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC2.45□□□□□ -2.02
CDH11P55287 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.45□□□□□ -2.02
CDH11P55287 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.45□□□□□ -2.02
CDH11P55287 RNU6-377P-201ENST00000515965 102 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 178 ms