Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 RPS3AP1-201ENST00000413190 320 ntBASIC0.47□□□□□ -2.33
GTF2A1P52655 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.47□□□□□ -2.33
GTF2A1P52655 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC0.47□□□□□ -2.33
GTF2A1P52655 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC0.47□□□□□ -2.33
GTF2A1P52655 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC0.47□□□□□ -2.33
GTF2A1P52655 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC0.47□□□□□ -2.33
GTF2A1P52655 RNU6-1225P-201ENST00000516336 65 ntBASIC0.47□□□□□ -2.33
GTF2A1P52655 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC0.47□□□□□ -2.33
GTF2A1P52655 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC0.47□□□□□ -2.33
GTF2A1P52655 CR383656.8-201ENST00000549046 145 ntBASIC0.47□□□□□ -2.33
GTF2A1P52655 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.47□□□□□ -2.33
GTF2A1P52655 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.47□□□□□ -2.33
GTF2A1P52655 AP000654.2-201ENST00000605633 586 ntBASIC0.47□□□□□ -2.33
GTF2A1P52655 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.47□□□□□ -2.33
GTF2A1P52655 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
GTF2A1P52655 RNU6-212P-201ENST00000362642 104 ntBASIC0.46□□□□□ -2.34
GTF2A1P52655 RNA5SP361-201ENST00000362686 118 ntBASIC0.46□□□□□ -2.34
GTF2A1P52655 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC0.46□□□□□ -2.34
GTF2A1P52655 Y_RNA.408-201ENST00000383987 102 ntBASIC0.46□□□□□ -2.34
GTF2A1P52655 AL357139.1-201ENST00000407792 426 ntBASIC0.46□□□□□ -2.34
GTF2A1P52655 Y_RNA.595-201ENST00000410403 105 ntBASIC0.46□□□□□ -2.34
GTF2A1P52655 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC0.46□□□□□ -2.34
GTF2A1P52655 AC244023.1-201ENST00000426884 112 ntBASIC0.46□□□□□ -2.34
GTF2A1P52655 CETN4P-201ENST00000432407 469 ntBASIC0.46□□□□□ -2.34
GTF2A1P52655 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.46□□□□□ -2.34
GTF2A1P52655 AL158053.1-201ENST00000441503 453 ntBASIC0.46□□□□□ -2.34
GTF2A1P52655 MTCO2P25-201ENST00000447065 681 ntBASIC0.46□□□□□ -2.34
GTF2A1P52655 RNU7-59P-201ENST00000459101 61 ntBASIC0.46□□□□□ -2.34
GTF2A1P52655 AC005840.1-201ENST00000498412 377 ntBASIC0.46□□□□□ -2.34
GTF2A1P52655 AC108729.3-201ENST00000513484 108 ntBASIC0.46□□□□□ -2.34
GTF2A1P52655 RNU4-54P-201ENST00000516428 129 ntBASIC0.46□□□□□ -2.34
GTF2A1P52655 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC0.46□□□□□ -2.34
GTF2A1P52655 MTCO3P15-201ENST00000526563 574 ntBASIC0.46□□□□□ -2.34
GTF2A1P52655 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC0.46□□□□□ -2.34
GTF2A1P52655 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.46□□□□□ -2.34
GTF2A1P52655 AC092325.1-201ENST00000566449 554 ntBASIC0.46□□□□□ -2.34
GTF2A1P52655 AC242498.1-201ENST00000604134 111 ntBASIC0.46□□□□□ -2.34
GTF2A1P52655 AL445435.1-201ENST00000604232 665 ntBASIC0.46□□□□□ -2.34
GTF2A1P52655 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC0.46□□□□□ -2.34
GTF2A1P52655 MIR6715A-201ENST00000615929 79 ntBASIC0.46□□□□□ -2.34
GTF2A1P52655 AC243994.1-201ENST00000618627 109 ntBASIC0.46□□□□□ -2.34
GTF2A1P52655 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.46□□□□□ -2.34
GTF2A1P52655 AC112204.3-201ENST00000623822 332 ntBASIC0.46□□□□□ -2.34
GTF2A1P52655 AC134026.1-201ENST00000623249 2239 ntBASIC0.46□□□□□ -2.34
GTF2A1P52655 AC010615.1-201ENST00000594254 1764 ntBASIC0.45□□□□□ -2.34
GTF2A1P52655 RNU6-1284P-201ENST00000363701 100 ntBASIC0.45□□□□□ -2.34
GTF2A1P52655 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC0.45□□□□□ -2.34
GTF2A1P52655 SNORA75B-201ENST00000384053 137 ntBASIC0.45□□□□□ -2.34
GTF2A1P52655 RNU6-701P-201ENST00000384059 107 ntBASIC0.45□□□□□ -2.34
GTF2A1P52655 MIR301A-201ENST00000385261 86 ntBASIC0.45□□□□□ -2.34
GTF2A1P52655 RNU6-1025P-201ENST00000410629 104 ntBASIC0.45□□□□□ -2.34
GTF2A1P52655 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.45□□□□□ -2.34
GTF2A1P52655 TXNL1P1-201ENST00000429528 554 ntBASIC0.45□□□□□ -2.34
GTF2A1P52655 AC099677.2-201ENST00000436385 175 ntBASIC0.45□□□□□ -2.34
GTF2A1P52655 MTCO3P43-201ENST00000440974 771 ntBASIC0.45□□□□□ -2.34
GTF2A1P52655 MTND4P25-201ENST00000441039 533 ntBASIC0.45□□□□□ -2.34
GTF2A1P52655 AC003071.1-201ENST00000451219 789 ntBASIC0.45□□□□□ -2.34
GTF2A1P52655 MTND1P16-201ENST00000465177 898 ntBASIC0.45□□□□□ -2.34
GTF2A1P52655 AF131216.2-201ENST00000512316 564 ntBASIC0.45□□□□□ -2.34
GTF2A1P52655 RNY4P37-201ENST00000516225 96 ntBASIC0.45□□□□□ -2.34
GTF2A1P52655 RNU6-150P-201ENST00000516237 95 ntBASIC0.45□□□□□ -2.34
GTF2A1P52655 RNA5SP168-201ENST00000516642 112 ntBASIC0.45□□□□□ -2.34
GTF2A1P52655 RNA5SP481-201ENST00000516814 122 ntBASIC0.45□□□□□ -2.34
GTF2A1P52655 RNA5SP490-201ENST00000517141 136 ntBASIC0.45□□□□□ -2.34
GTF2A1P52655 RNU6-165P-201ENST00000517170 99 ntBASIC0.45□□□□□ -2.34
GTF2A1P52655 RNU6-1315P-201ENST00000517187 99 ntBASIC0.45□□□□□ -2.34
GTF2A1P52655 AC091163.3-201ENST00000518269 1144 ntBASIC0.45□□□□□ -2.34
GTF2A1P52655 AC008015.1-201ENST00000555505 465 ntBASIC0.45□□□□□ -2.34
GTF2A1P52655 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.45□□□□□ -2.34
GTF2A1P52655 AC133485.1-201ENST00000567176 124 ntBASIC0.45□□□□□ -2.34
GTF2A1P52655 AC138907.6-201ENST00000568401 126 ntBASIC0.45□□□□□ -2.34
GTF2A1P52655 AC104984.5-201ENST00000586878 94 ntBASIC0.45□□□□□ -2.34
GTF2A1P52655 AC007363.1-201ENST00000604736 620 ntBASIC0.45□□□□□ -2.34
GTF2A1P52655 AC105129.3-201ENST00000605455 485 ntBASIC0.45□□□□□ -2.34
GTF2A1P52655 AC023158.2-201ENST00000614876 543 ntBASIC0.45□□□□□ -2.34
GTF2A1P52655 AL159153.1-201ENST00000619688 317 ntBASIC0.45□□□□□ -2.34
GTF2A1P52655 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.45□□□□□ -2.34
GTF2A1P52655 AC231657.1-201ENST00000624313 397 ntBASIC0.45□□□□□ -2.34
GTF2A1P52655 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC0.44□□□□□ -2.34
GTF2A1P52655 SNORA63D-201ENST00000364359 132 ntBASIC0.44□□□□□ -2.34
GTF2A1P52655 AL591704.1-201ENST00000432574 275 ntBASIC0.44□□□□□ -2.34
GTF2A1P52655 NEFMP1-201ENST00000443423 1006 ntBASIC0.44□□□□□ -2.34
GTF2A1P52655 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC0.44□□□□□ -2.34
GTF2A1P52655 snoU13.30-201ENST00000458951 104 ntBASIC0.44□□□□□ -2.34
GTF2A1P52655 AC024589.1-201ENST00000512207 263 ntBASIC0.44□□□□□ -2.34
GTF2A1P52655 TRMT112P2-201ENST00000512910 132 ntBASIC0.44□□□□□ -2.34
GTF2A1P52655 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC0.44□□□□□ -2.34
GTF2A1P52655 AC021451.1-201ENST00000523498 1129 ntBASIC0.44□□□□□ -2.34
GTF2A1P52655 AC025423.5-201ENST00000550230 219 ntBASIC0.44□□□□□ -2.34
GTF2A1P52655 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.44□□□□□ -2.34
GTF2A1P52655 AC104072.1-201ENST00000568817 668 ntBASIC0.44□□□□□ -2.34
GTF2A1P52655 MIR5708-201ENST00000579723 85 ntBASIC0.44□□□□□ -2.34
GTF2A1P52655 AL391001.1-201ENST00000602747 715 ntBASIC0.44□□□□□ -2.34
GTF2A1P52655 AC107304.1-201ENST00000604229 296 ntBASIC0.44□□□□□ -2.34
GTF2A1P52655 AC069114.2-201ENST00000604699 304 ntBASIC0.44□□□□□ -2.34
GTF2A1P52655 AC026741.1-201ENST00000605892 482 ntBASIC0.44□□□□□ -2.34
GTF2A1P52655 AC097460.3-201ENST00000623099 442 ntBASIC0.44□□□□□ -2.34
GTF2A1P52655 MTND5P33-201ENST00000571250 1450 ntBASIC0.43□□□□□ -2.34
GTF2A1P52655 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
GTF2A1P52655 RNA5SP499-201ENST00000363982 119 ntBASIC0.43□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms