Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 RNA5SP219-201ENST00000390940 113 ntBASIC2.82□□□□□ -1.96
CLCN3P51790 RNA5SP210-201ENST00000391034 120 ntBASIC2.82□□□□□ -1.96
CLCN3P51790 AL445529.1-201ENST00000398713 389 ntBASIC2.82□□□□□ -1.96
CLCN3P51790 AL590004.2-201ENST00000404787 371 ntBASIC2.82□□□□□ -1.96
CLCN3P51790 RPS4XP7-201ENST00000406274 780 ntBASIC2.82□□□□□ -1.96
CLCN3P51790 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.82□□□□□ -1.96
CLCN3P51790 RPS3AP52-201ENST00000435639 297 ntBASIC2.82□□□□□ -1.96
CLCN3P51790 AC117503.1-201ENST00000472241 394 ntBASIC2.82□□□□□ -1.96
CLCN3P51790 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.82□□□□□ -1.96
CLCN3P51790 SEM1P1-201ENST00000506694 209 ntBASIC2.82□□□□□ -1.96
CLCN3P51790 AC116655.1-201ENST00000508324 901 ntBASIC2.82□□□□□ -1.96
CLCN3P51790 RN7SKP24-201ENST00000515888 284 ntBASIC2.82□□□□□ -1.96
CLCN3P51790 RNU6-256P-201ENST00000516747 97 ntBASIC2.82□□□□□ -1.96
CLCN3P51790 AC109329.2-201ENST00000519658 482 ntBASIC2.82□□□□□ -1.96
CLCN3P51790 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
CLCN3P51790 AC007536.1-201ENST00000533382 349 ntBASIC2.82□□□□□ -1.96
CLCN3P51790 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.82□□□□□ -1.96
CLCN3P51790 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.82□□□□□ -1.96
CLCN3P51790 MIR5692C1-201ENST00000585309 91 ntBASIC2.82□□□□□ -1.96
CLCN3P51790 AC008739.2-201ENST00000597006 317 ntBASIC2.82□□□□□ -1.96
CLCN3P51790 AC091152.3-201ENST00000604227 325 ntBASIC2.82□□□□□ -1.96
CLCN3P51790 AP000787.2-201ENST00000604432 568 ntBASIC2.82□□□□□ -1.96
CLCN3P51790 AC104237.2-201ENST00000612456 443 ntBASIC2.82□□□□□ -1.96
CLCN3P51790 AC093913.1-201ENST00000614178 329 ntBASIC2.82□□□□□ -1.96
CLCN3P51790 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.82□□□□□ -1.96
CLCN3P51790 UCA1.1-201ENST00000620952 75 ntBASIC2.82□□□□□ -1.96
CLCN3P51790 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.82□□□□□ -1.96
CLCN3P51790 RMST_7.1-201ENST00000621935 268 ntBASIC2.82□□□□□ -1.96
CLCN3P51790 AC002064.3-201ENST00000623448 346 ntBASIC2.82□□□□□ -1.96
CLCN3P51790 Z69720.2-201ENST00000624755 279 ntBASIC2.82□□□□□ -1.96
CLCN3P51790 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.82□□□□□ -1.96
CLCN3P51790 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.82□□□□□ -1.96
CLCN3P51790 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CLCN3P51790 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.81□□□□□ -1.96
CLCN3P51790 RNU6-748P-201ENST00000384648 107 ntBASIC2.81□□□□□ -1.96
CLCN3P51790 SNORA67.4-201ENST00000384688 142 ntBASIC2.81□□□□□ -1.96
CLCN3P51790 MIR518C-201ENST00000384822 101 ntBASIC2.81□□□□□ -1.96
CLCN3P51790 MIR27B-201ENST00000385129 97 ntBASIC2.81□□□□□ -1.96
CLCN3P51790 VN1R36P-201ENST00000414936 291 ntBASIC2.81□□□□□ -1.96
CLCN3P51790 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.81□□□□□ -1.96
CLCN3P51790 AC016831.2-201ENST00000417179 352 ntBASIC2.81□□□□□ -1.96
CLCN3P51790 ATG3P1-201ENST00000419507 911 ntBASIC2.81□□□□□ -1.96
CLCN3P51790 AF228730.4-201ENST00000421457 183 ntBASIC2.81□□□□□ -1.96
CLCN3P51790 PTGES3P4-201ENST00000426243 356 ntBASIC2.81□□□□□ -1.96
CLCN3P51790 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.81□□□□□ -1.96
CLCN3P51790 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.81□□□□□ -1.96
CLCN3P51790 PPP1R2P5-201ENST00000457256 603 ntBASIC2.81□□□□□ -1.96
CLCN3P51790 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.81□□□□□ -1.96
CLCN3P51790 RNA5SP76-201ENST00000516277 87 ntBASIC2.81□□□□□ -1.96
CLCN3P51790 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.81□□□□□ -1.96
CLCN3P51790 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.81□□□□□ -1.96
CLCN3P51790 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.81□□□□□ -1.96
CLCN3P51790 AC243960.4-201ENST00000600532 288 ntBASIC2.81□□□□□ -1.96
CLCN3P51790 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.81□□□□□ -1.96
CLCN3P51790 AC013412.1-201ENST00000610687 192 ntBASIC2.81□□□□□ -1.96
CLCN3P51790 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CLCN3P51790 AL138726.1-201ENST00000614873 333 ntBASIC2.81□□□□□ -1.96
CLCN3P51790 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.81□□□□□ -1.96
CLCN3P51790 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CLCN3P51790 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
CLCN3P51790 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.8□□□□□ -1.96
CLCN3P51790 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.8□□□□□ -1.96
CLCN3P51790 MTND4P23-201ENST00000447723 1363 ntBASIC2.8□□□□□ -1.96
CLCN3P51790 RNU6-266P-201ENST00000364225 107 ntBASIC2.8□□□□□ -1.96
CLCN3P51790 RNU6-19P-201ENST00000384718 107 ntBASIC2.8□□□□□ -1.96
CLCN3P51790 RNU4-14P-201ENST00000410858 122 ntBASIC2.8□□□□□ -1.96
CLCN3P51790 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.8□□□□□ -1.96
CLCN3P51790 AL096701.2-201ENST00000416920 238 ntBASIC2.8□□□□□ -1.96
CLCN3P51790 RPL32P28-201ENST00000443577 397 ntBASIC2.8□□□□□ -1.96
CLCN3P51790 MTND1P17-201ENST00000448961 204 ntBASIC2.8□□□□□ -1.96
CLCN3P51790 RPL31P41-201ENST00000477967 372 ntBASIC2.8□□□□□ -1.96
CLCN3P51790 Y_RNA.675-201ENST00000516389 149 ntBASIC2.8□□□□□ -1.96
CLCN3P51790 SCARNA11.3-201ENST00000517276 130 ntBASIC2.8□□□□□ -1.96
CLCN3P51790 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.8□□□□□ -1.96
CLCN3P51790 CKS1BP7-201ENST00000522230 235 ntBASIC2.8□□□□□ -1.96
CLCN3P51790 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.8□□□□□ -1.96
CLCN3P51790 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.8□□□□□ -1.96
CLCN3P51790 AC091544.4-201ENST00000555268 342 ntBASIC2.8□□□□□ -1.96
CLCN3P51790 AC078899.3-201ENST00000599065 212 ntBASIC2.8□□□□□ -1.96
CLCN3P51790 AC107871.2-201ENST00000612894 502 ntBASIC2.8□□□□□ -1.96
CLCN3P51790 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CLCN3P51790 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
CLCN3P51790 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.8□□□□□ -1.96
CLCN3P51790 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.8□□□□□ -1.96
CLCN3P51790 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CLCN3P51790 HAUS6P2-201ENST00000433254 2404 ntBASIC2.79□□□□□ -1.96
CLCN3P51790 RNA5SP289-201ENST00000362332 137 ntBASIC2.79□□□□□ -1.96
CLCN3P51790 Y_RNA.58-201ENST00000362807 102 ntBASIC2.79□□□□□ -1.96
CLCN3P51790 RNU6-942P-201ENST00000363002 107 ntBASIC2.79□□□□□ -1.96
CLCN3P51790 Y_RNA.154-201ENST00000363624 102 ntBASIC2.79□□□□□ -1.96
CLCN3P51790 RNU6-1303P-201ENST00000364841 107 ntBASIC2.79□□□□□ -1.96
CLCN3P51790 RNY3P1-201ENST00000365085 102 ntBASIC2.79□□□□□ -1.96
CLCN3P51790 RNY3-201ENST00000365484 102 ntBASIC2.79□□□□□ -1.96
CLCN3P51790 Y_RNA.394-201ENST00000383942 103 ntBASIC2.79□□□□□ -1.96
CLCN3P51790 Y_RNA.490-201ENST00000384413 102 ntBASIC2.79□□□□□ -1.96
CLCN3P51790 RN7SKP158-201ENST00000410453 326 ntBASIC2.79□□□□□ -1.96
CLCN3P51790 RNA5SP508-201ENST00000411327 119 ntBASIC2.79□□□□□ -1.96
CLCN3P51790 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.79□□□□□ -1.96
CLCN3P51790 AL441985.1-201ENST00000457727 251 ntBASIC2.79□□□□□ -1.96
CLCN3P51790 MTND4P17-201ENST00000470444 350 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms