Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 AL137159.1-201ENST00000452808 512 ntBASIC2.16□□□□□ -2.06
GPC3P51654 GMFBP1-201ENST00000467831 427 ntBASIC2.16□□□□□ -2.06
GPC3P51654 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC2.16□□□□□ -2.06
GPC3P51654 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.16□□□□□ -2.06
GPC3P51654 SNORD27.1-201ENST00000516319 72 ntBASIC2.16□□□□□ -2.06
GPC3P51654 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.16□□□□□ -2.06
GPC3P51654 NDUFA5P6-201ENST00000542110 379 ntBASIC2.16□□□□□ -2.06
GPC3P51654 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.16□□□□□ -2.06
GPC3P51654 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.16□□□□□ -2.06
GPC3P51654 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.16□□□□□ -2.06
GPC3P51654 AC008521.1-201ENST00000587471 187 ntBASIC2.16□□□□□ -2.06
GPC3P51654 AC073648.5-201ENST00000603502 305 ntBASIC2.16□□□□□ -2.06
GPC3P51654 SNRPGP19-201ENST00000603826 189 ntBASIC2.16□□□□□ -2.06
GPC3P51654 AC005034.5-201ENST00000604219 466 ntBASIC2.16□□□□□ -2.06
GPC3P51654 AL121992.2-201ENST00000606262 256 ntBASIC2.16□□□□□ -2.06
GPC3P51654 RN7SKP299-201ENST00000606679 301 ntBASIC2.16□□□□□ -2.06
GPC3P51654 AC099842.1-201ENST00000619919 596 ntBASIC2.16□□□□□ -2.06
GPC3P51654 AC098657.3-201ENST00000620434 263 ntBASIC2.16□□□□□ -2.06
GPC3P51654 AC091932.3-201ENST00000624223 323 ntBASIC2.16□□□□□ -2.06
GPC3P51654 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.16□□□□□ -2.06
GPC3P51654 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.16□□□□□ -2.06
GPC3P51654 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
GPC3P51654 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.15□□□□□ -2.06
GPC3P51654 RNU6-181P-201ENST00000363225 107 ntBASIC2.15□□□□□ -2.07
GPC3P51654 RNU1-23P-201ENST00000363361 144 ntBASIC2.15□□□□□ -2.07
GPC3P51654 SNORD14B-201ENST00000364533 90 ntBASIC2.15□□□□□ -2.07
GPC3P51654 U3.13-201ENST00000364804 214 ntBASIC2.15□□□□□ -2.07
GPC3P51654 Y_RNA.367-201ENST00000365544 101 ntBASIC2.15□□□□□ -2.07
GPC3P51654 RNU4-48P-201ENST00000365559 182 ntBASIC2.15□□□□□ -2.07
GPC3P51654 SNORA75-201ENST00000384158 137 ntBASIC2.15□□□□□ -2.07
GPC3P51654 RNU6-456P-201ENST00000384493 107 ntBASIC2.15□□□□□ -2.07
GPC3P51654 SNORD116-20-201ENST00000384529 92 ntBASIC2.15□□□□□ -2.07
GPC3P51654 RNU6-606P-201ENST00000384721 111 ntBASIC2.15□□□□□ -2.07
GPC3P51654 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.15□□□□□ -2.07
GPC3P51654 CDK8P2-201ENST00000415020 547 ntBASIC2.15□□□□□ -2.07
GPC3P51654 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.15□□□□□ -2.07
GPC3P51654 AC007677.1-201ENST00000445757 515 ntBASIC2.15□□□□□ -2.07
GPC3P51654 C1DP4-201ENST00000455429 424 ntBASIC2.15□□□□□ -2.07
GPC3P51654 HMGN2P23-201ENST00000456759 269 ntBASIC2.15□□□□□ -2.07
GPC3P51654 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.15□□□□□ -2.07
GPC3P51654 AC079382.1-201ENST00000493346 557 ntBASIC2.15□□□□□ -2.07
GPC3P51654 RNA5SP182-201ENST00000516064 82 ntBASIC2.15□□□□□ -2.07
GPC3P51654 RNU6-445P-201ENST00000516949 107 ntBASIC2.15□□□□□ -2.07
GPC3P51654 RNU6-1220P-201ENST00000517126 108 ntBASIC2.15□□□□□ -2.07
GPC3P51654 AP002963.1-201ENST00000530590 184 ntBASIC2.15□□□□□ -2.07
GPC3P51654 AC135279.1-201ENST00000543493 504 ntBASIC2.15□□□□□ -2.07
GPC3P51654 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC2.15□□□□□ -2.07
GPC3P51654 AC110588.1-201ENST00000559699 137 ntBASIC2.15□□□□□ -2.07
GPC3P51654 MTCYBP33-201ENST00000575007 1130 ntBASIC2.15□□□□□ -2.07
GPC3P51654 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC2.15□□□□□ -2.07
GPC3P51654 AC119751.7-201ENST00000600494 245 ntBASIC2.15□□□□□ -2.07
GPC3P51654 DEFB131E-202ENST00000602581 683 ntBASIC2.15□□□□□ -2.07
GPC3P51654 AL627230.6-201ENST00000611129 280 ntBASIC2.15□□□□□ -2.07
GPC3P51654 AC022202.1-201ENST00000613515 211 ntBASIC2.15□□□□□ -2.07
GPC3P51654 ZNF702P-202ENST00000434269 1966 ntBASIC2.15□□□□□ -2.07
GPC3P51654 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
GPC3P51654 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
GPC3P51654 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.14□□□□□ -2.07
GPC3P51654 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.14□□□□□ -2.07
GPC3P51654 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
GPC3P51654 SNORD3E-201ENST00000362899 217 ntBASIC2.14□□□□□ -2.07
GPC3P51654 RNU6-942P-201ENST00000363002 107 ntBASIC2.14□□□□□ -2.07
GPC3P51654 RNU5A-6P-201ENST00000384136 116 ntBASIC2.14□□□□□ -2.07
GPC3P51654 RNU6-74P-201ENST00000384235 107 ntBASIC2.14□□□□□ -2.07
GPC3P51654 RNU6-348P-201ENST00000384386 107 ntBASIC2.14□□□□□ -2.07
GPC3P51654 MIR583-201ENST00000384846 75 ntBASIC2.14□□□□□ -2.07
GPC3P51654 SNORA26.9-201ENST00000391322 122 ntBASIC2.14□□□□□ -2.07
GPC3P51654 RNA5SP338-201ENST00000410495 85 ntBASIC2.14□□□□□ -2.07
GPC3P51654 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.14□□□□□ -2.07
GPC3P51654 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC2.14□□□□□ -2.07
GPC3P51654 MTCO1P19-201ENST00000443487 500 ntBASIC2.14□□□□□ -2.07
GPC3P51654 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.14□□□□□ -2.07
GPC3P51654 AC132479.1-201ENST00000449160 144 ntBASIC2.14□□□□□ -2.07
GPC3P51654 OFD1P4Y-201ENST00000455273 1179 ntBASIC2.14□□□□□ -2.07
GPC3P51654 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.14□□□□□ -2.07
GPC3P51654 AC079140.5-201ENST00000507882 310 ntBASIC2.14□□□□□ -2.07
GPC3P51654 AC104806.1-201ENST00000508720 308 ntBASIC2.14□□□□□ -2.07
GPC3P51654 OR5AL2P-201ENST00000532185 920 ntBASIC2.14□□□□□ -2.07
GPC3P51654 AC006362.1-201ENST00000567392 174 ntBASIC2.14□□□□□ -2.07
GPC3P51654 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.14□□□□□ -2.07
GPC3P51654 AC011494.1-201ENST00000596454 237 ntBASIC2.14□□□□□ -2.07
GPC3P51654 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.14□□□□□ -2.07
GPC3P51654 AC091834.1-201ENST00000614543 472 ntBASIC2.14□□□□□ -2.07
GPC3P51654 AC093648.1-201ENST00000623546 606 ntBASIC2.14□□□□□ -2.07
GPC3P51654 AC005609.4-201ENST00000625071 447 ntBASIC2.14□□□□□ -2.07
GPC3P51654 MTND4P1-201ENST00000457501 1466 ntBASIC2.14□□□□□ -2.07
GPC3P51654 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
GPC3P51654 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.13□□□□□ -2.07
GPC3P51654 RNU6-1287P-201ENST00000362914 107 ntBASIC2.13□□□□□ -2.07
GPC3P51654 RNU6-1120P-201ENST00000362988 108 ntBASIC2.13□□□□□ -2.07
GPC3P51654 SNORD115-7-201ENST00000365306 82 ntBASIC2.13□□□□□ -2.07
GPC3P51654 RNU6-1060P-201ENST00000384664 107 ntBASIC2.13□□□□□ -2.07
GPC3P51654 RAP1BP3-201ENST00000407180 549 ntBASIC2.13□□□□□ -2.07
GPC3P51654 AL030996.1-201ENST00000411430 235 ntBASIC2.13□□□□□ -2.07
GPC3P51654 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC2.13□□□□□ -2.07
GPC3P51654 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.13□□□□□ -2.07
GPC3P51654 AL353689.1-201ENST00000438895 199 ntBASIC2.13□□□□□ -2.07
GPC3P51654 CALM1P1-201ENST00000442082 433 ntBASIC2.13□□□□□ -2.07
GPC3P51654 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC2.13□□□□□ -2.07
GPC3P51654 MTND2P22-201ENST00000444325 1033 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms