Protein–RNA interactions for Protein: P49761

CLK3, Dual specificity protein kinase CLK3, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P49761 RNU6-130P-201ENST00000411112 103 ntBASIC3.3□□□□□ -1.88
CLK3P49761 RNA5SP31-201ENST00000411144 127 ntBASIC3.3□□□□□ -1.88
CLK3P49761 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.3□□□□□ -1.88
CLK3P49761 AC096920.1-201ENST00000423991 241 ntBASIC3.3□□□□□ -1.88
CLK3P49761 TRIAP1P1-201ENST00000427062 225 ntBASIC3.3□□□□□ -1.88
CLK3P49761 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.3□□□□□ -1.88
CLK3P49761 AL592045.1-201ENST00000429867 352 ntBASIC3.3□□□□□ -1.88
CLK3P49761 MYL8P-204ENST00000431574 518 ntBASIC3.3□□□□□ -1.88
CLK3P49761 AL159987.2-201ENST00000432754 307 ntBASIC3.3□□□□□ -1.88
CLK3P49761 AL512844.2-201ENST00000433990 593 ntBASIC3.3□□□□□ -1.88
CLK3P49761 AC009969.1-201ENST00000438726 172 ntBASIC3.3□□□□□ -1.88
CLK3P49761 AL133547.1-201ENST00000448546 220 ntBASIC3.3□□□□□ -1.88
CLK3P49761 RNU6-143P-201ENST00000516942 93 ntBASIC3.3□□□□□ -1.88
CLK3P49761 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.3□□□□□ -1.88
CLK3P49761 AMZ2P1-203ENST00000565833 850 ntBASIC3.3□□□□□ -1.88
CLK3P49761 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.3□□□□□ -1.88
CLK3P49761 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.3□□□□□ -1.88
CLK3P49761 AL161798.1-201ENST00000604630 131 ntBASIC3.3□□□□□ -1.88
CLK3P49761 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.3□□□□□ -1.88
CLK3P49761 AC243829.7-201ENST00000633081 225 ntBASIC3.3□□□□□ -1.88
CLK3P49761 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC3.3□□□□□ -1.88
CLK3P49761 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CLK3P49761 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.3□□□□□ -1.88
CLK3P49761 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CLK3P49761 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.3□□□□□ -1.88
CLK3P49761 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
CLK3P49761 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CLK3P49761 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.29□□□□□ -1.88
CLK3P49761 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
CLK3P49761 AP000560.1-201ENST00000624150 1937 ntBASIC3.29□□□□□ -1.88
CLK3P49761 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.29□□□□□ -1.88
CLK3P49761 RNU1-75P-201ENST00000347264 129 ntBASIC3.29□□□□□ -1.88
CLK3P49761 Y_RNA.27-201ENST00000362540 103 ntBASIC3.29□□□□□ -1.88
CLK3P49761 RNU6-280P-201ENST00000364145 104 ntBASIC3.29□□□□□ -1.88
CLK3P49761 RNA5SP51-201ENST00000364750 119 ntBASIC3.29□□□□□ -1.88
CLK3P49761 SNORA73.2-201ENST00000364946 201 ntBASIC3.29□□□□□ -1.88
CLK3P49761 RNU6-395P-201ENST00000365662 106 ntBASIC3.29□□□□□ -1.88
CLK3P49761 DYNLT3P1-201ENST00000378574 347 ntBASIC3.29□□□□□ -1.88
CLK3P49761 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.29□□□□□ -1.88
CLK3P49761 U3.39-201ENST00000408569 239 ntBASIC3.29□□□□□ -1.88
CLK3P49761 AC092047.1-201ENST00000424997 240 ntBASIC3.29□□□□□ -1.88
CLK3P49761 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CLK3P49761 AC104332.1-201ENST00000440471 797 ntBASIC3.29□□□□□ -1.88
CLK3P49761 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CLK3P49761 U8.21-201ENST00000459536 136 ntBASIC3.29□□□□□ -1.88
CLK3P49761 AC098869.1-201ENST00000481627 292 ntBASIC3.29□□□□□ -1.88
CLK3P49761 RPL30P10-201ENST00000488148 337 ntBASIC3.29□□□□□ -1.88
CLK3P49761 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.29□□□□□ -1.88
CLK3P49761 AC091144.1-201ENST00000519573 138 ntBASIC3.29□□□□□ -1.88
CLK3P49761 AL157871.3-201ENST00000557231 293 ntBASIC3.29□□□□□ -1.88
CLK3P49761 AC130289.1-201ENST00000577321 73 ntBASIC3.29□□□□□ -1.88
CLK3P49761 AC006130.2-201ENST00000586202 326 ntBASIC3.29□□□□□ -1.88
CLK3P49761 MIR8076-201ENST00000611401 83 ntBASIC3.29□□□□□ -1.88
CLK3P49761 AL121772.2-201ENST00000614331 297 ntBASIC3.29□□□□□ -1.88
CLK3P49761 AC004792.1-201ENST00000614523 137 ntBASIC3.29□□□□□ -1.88
CLK3P49761 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.29□□□□□ -1.88
CLK3P49761 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.29□□□□□ -1.88
CLK3P49761 AL136164.4-201ENST00000625013 2135 ntBASIC3.29□□□□□ -1.88
CLK3P49761 Z75746.1-201ENST00000440243 2080 ntBASIC3.29□□□□□ -1.88
CLK3P49761 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.29□□□□□ -1.88
CLK3P49761 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.29□□□□□ -1.88
CLK3P49761 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CLK3P49761 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
CLK3P49761 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.28□□□□□ -1.88
CLK3P49761 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CLK3P49761 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.28□□□□□ -1.88
CLK3P49761 AL391987.6-201ENST00000305671 199 ntBASIC3.28□□□□□ -1.88
CLK3P49761 Y_RNA.352-201ENST00000365439 102 ntBASIC3.28□□□□□ -1.88
CLK3P49761 MIR521-1-201ENST00000384902 87 ntBASIC3.28□□□□□ -1.88
CLK3P49761 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CLK3P49761 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.28□□□□□ -1.88
CLK3P49761 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.28□□□□□ -1.88
CLK3P49761 SDAD1P3-201ENST00000427380 333 ntBASIC3.28□□□□□ -1.88
CLK3P49761 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.28□□□□□ -1.88
CLK3P49761 AL139109.1-201ENST00000455491 297 ntBASIC3.28□□□□□ -1.88
CLK3P49761 RN7SL542P-201ENST00000467147 294 ntBASIC3.28□□□□□ -1.88
CLK3P49761 AC021205.2-201ENST00000480069 347 ntBASIC3.28□□□□□ -1.88
CLK3P49761 RPL30P14-201ENST00000482744 348 ntBASIC3.28□□□□□ -1.88
CLK3P49761 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC3.28□□□□□ -1.88
CLK3P49761 AC074250.1-201ENST00000511117 192 ntBASIC3.28□□□□□ -1.88
CLK3P49761 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.28□□□□□ -1.88
CLK3P49761 AC067942.3-201ENST00000512025 362 ntBASIC3.28□□□□□ -1.88
CLK3P49761 RNU4-71P-201ENST00000516258 113 ntBASIC3.28□□□□□ -1.88
CLK3P49761 AC010900.2-201ENST00000604508 210 ntBASIC3.28□□□□□ -1.88
CLK3P49761 AC004852.3-201ENST00000614131 326 ntBASIC3.28□□□□□ -1.88
CLK3P49761 AC068831.7-201ENST00000616954 363 ntBASIC3.28□□□□□ -1.88
CLK3P49761 AC091903.1-201ENST00000624322 454 ntBASIC3.28□□□□□ -1.88
CLK3P49761 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
CLK3P49761 AL034408.1-202ENST00000636088 415 ntBASIC3.28□□□□□ -1.88
CLK3P49761 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.89
CLK3P49761 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CLK3P49761 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CLK3P49761 SNORD9-201ENST00000362566 104 ntBASIC3.27□□□□□ -1.89
CLK3P49761 Y_RNA.33-201ENST00000362591 102 ntBASIC3.27□□□□□ -1.89
CLK3P49761 Y_RNA.237-201ENST00000364439 102 ntBASIC3.27□□□□□ -1.89
CLK3P49761 Y_RNA.270-201ENST00000364693 104 ntBASIC3.27□□□□□ -1.89
CLK3P49761 Y_RNA.297-201ENST00000364950 91 ntBASIC3.27□□□□□ -1.89
CLK3P49761 SNORA5A-201ENST00000384111 134 ntBASIC3.27□□□□□ -1.89
CLK3P49761 RNU6-708P-201ENST00000384217 107 ntBASIC3.27□□□□□ -1.89
CLK3P49761 Y_RNA.458-201ENST00000384240 102 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 159.2 ms