Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.64□□□□□ -2.15
CX3CR1P49238 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.64□□□□□ -2.15
CX3CR1P49238 AC040904.1-201ENST00000590850 223 ntBASIC1.64□□□□□ -2.15
CX3CR1P49238 AC110760.3-201ENST00000598794 467 ntBASIC1.64□□□□□ -2.15
CX3CR1P49238 AC119751.7-201ENST00000600494 245 ntBASIC1.64□□□□□ -2.15
CX3CR1P49238 Z99497.2-201ENST00000603634 310 ntBASIC1.64□□□□□ -2.15
CX3CR1P49238 Z84480.1-201ENST00000605131 311 ntBASIC1.64□□□□□ -2.15
CX3CR1P49238 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.64□□□□□ -2.15
CX3CR1P49238 AC099842.1-201ENST00000619919 596 ntBASIC1.64□□□□□ -2.15
CX3CR1P49238 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.64□□□□□ -2.15
CX3CR1P49238 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
CX3CR1P49238 AL354685.2-201ENST00000448218 1447 ntBASIC1.64□□□□□ -2.15
CX3CR1P49238 AC092881.1-201ENST00000638218 2733 ntBASIC1.63□□□□□ -2.15
CX3CR1P49238 SNORD56.1-201ENST00000362913 68 ntBASIC1.63□□□□□ -2.15
CX3CR1P49238 RNU6-181P-201ENST00000363225 107 ntBASIC1.63□□□□□ -2.15
CX3CR1P49238 RNY1P12-201ENST00000364251 105 ntBASIC1.63□□□□□ -2.15
CX3CR1P49238 SNORA16.1-201ENST00000364597 132 ntBASIC1.63□□□□□ -2.15
CX3CR1P49238 RNU6-108P-201ENST00000365558 107 ntBASIC1.63□□□□□ -2.15
CX3CR1P49238 RNU6-116P-201ENST00000384042 109 ntBASIC1.63□□□□□ -2.15
CX3CR1P49238 RNA5SP212-201ENST00000391223 107 ntBASIC1.63□□□□□ -2.15
CX3CR1P49238 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.63□□□□□ -2.15
CX3CR1P49238 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC1.63□□□□□ -2.15
CX3CR1P49238 CETN4P-201ENST00000432407 469 ntBASIC1.63□□□□□ -2.15
CX3CR1P49238 GPR143P-201ENST00000434155 205 ntBASIC1.63□□□□□ -2.15
CX3CR1P49238 HMGB1P31-201ENST00000437242 427 ntBASIC1.63□□□□□ -2.15
CX3CR1P49238 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC1.63□□□□□ -2.15
CX3CR1P49238 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.63□□□□□ -2.15
CX3CR1P49238 AC245102.2-201ENST00000448956 180 ntBASIC1.63□□□□□ -2.15
CX3CR1P49238 AL353752.1-201ENST00000454946 260 ntBASIC1.63□□□□□ -2.15
CX3CR1P49238 AC006026.2-201ENST00000457376 180 ntBASIC1.63□□□□□ -2.15
CX3CR1P49238 RPS29P15-201ENST00000458329 171 ntBASIC1.63□□□□□ -2.15
CX3CR1P49238 snoU13.14-201ENST00000459372 104 ntBASIC1.63□□□□□ -2.15
CX3CR1P49238 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.63□□□□□ -2.15
CX3CR1P49238 AC092436.1-201ENST00000506450 503 ntBASIC1.63□□□□□ -2.15
CX3CR1P49238 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.63□□□□□ -2.15
CX3CR1P49238 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC1.63□□□□□ -2.15
CX3CR1P49238 RNU6-965P-201ENST00000516721 96 ntBASIC1.63□□□□□ -2.15
CX3CR1P49238 RNU2-44P-201ENST00000516795 194 ntBASIC1.63□□□□□ -2.15
CX3CR1P49238 RNU6-445P-201ENST00000516949 107 ntBASIC1.63□□□□□ -2.15
CX3CR1P49238 RNU6-410P-201ENST00000517006 107 ntBASIC1.63□□□□□ -2.15
CX3CR1P49238 HSPE1P18-201ENST00000517602 280 ntBASIC1.63□□□□□ -2.15
CX3CR1P49238 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.63□□□□□ -2.15
CX3CR1P49238 AP002453.2-201ENST00000533503 320 ntBASIC1.63□□□□□ -2.15
CX3CR1P49238 AC022616.8-201ENST00000533569 253 ntBASIC1.63□□□□□ -2.15
CX3CR1P49238 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.63□□□□□ -2.15
CX3CR1P49238 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC1.63□□□□□ -2.15
CX3CR1P49238 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.63□□□□□ -2.15
CX3CR1P49238 AC008088.1-201ENST00000580993 280 ntBASIC1.63□□□□□ -2.15
CX3CR1P49238 MIR3682-201ENST00000581338 84 ntBASIC1.63□□□□□ -2.15
CX3CR1P49238 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.63□□□□□ -2.15
CX3CR1P49238 AL158063.1-201ENST00000615349 536 ntBASIC1.63□□□□□ -2.15
CX3CR1P49238 AC138649.3-201ENST00000622154 254 ntBASIC1.63□□□□□ -2.15
CX3CR1P49238 ZNF355P-201ENST00000427301 3216 ntBASIC1.63□□□□□ -2.15
CX3CR1P49238 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.63□□□□□ -2.15
CX3CR1P49238 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.62□□□□□ -2.15
CX3CR1P49238 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
CX3CR1P49238 snoU2_19.1-201ENST00000362361 80 ntBASIC1.62□□□□□ -2.15
CX3CR1P49238 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.62□□□□□ -2.15
CX3CR1P49238 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.62□□□□□ -2.15
CX3CR1P49238 OR6C66P-201ENST00000414917 930 ntBASIC1.62□□□□□ -2.15
CX3CR1P49238 USP9YP18-201ENST00000425912 695 ntBASIC1.62□□□□□ -2.15
CX3CR1P49238 MTCO2P11-201ENST00000431069 680 ntBASIC1.62□□□□□ -2.15
CX3CR1P49238 MTND4P32-201ENST00000437189 1237 ntBASIC1.62□□□□□ -2.15
CX3CR1P49238 MTND2P29-201ENST00000438595 412 ntBASIC1.62□□□□□ -2.15
CX3CR1P49238 PTP4A1P4-201ENST00000512479 322 ntBASIC1.62□□□□□ -2.15
CX3CR1P49238 AC117532.1-201ENST00000514638 323 ntBASIC1.62□□□□□ -2.15
CX3CR1P49238 Y_RNA.695-201ENST00000516715 107 ntBASIC1.62□□□□□ -2.15
CX3CR1P49238 RNU6-430P-201ENST00000517078 107 ntBASIC1.62□□□□□ -2.15
CX3CR1P49238 AP005660.1-201ENST00000522972 293 ntBASIC1.62□□□□□ -2.15
CX3CR1P49238 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.62□□□□□ -2.15
CX3CR1P49238 AC091544.4-201ENST00000555268 342 ntBASIC1.62□□□□□ -2.15
CX3CR1P49238 AC024614.2-201ENST00000577584 372 ntBASIC1.62□□□□□ -2.15
CX3CR1P49238 AC078795.2-201ENST00000602835 1252 ntBASIC1.62□□□□□ -2.15
CX3CR1P49238 AC006566.1-201ENST00000608943 513 ntBASIC1.62□□□□□ -2.15
CX3CR1P49238 AC009509.4-201ENST00000619202 509 ntBASIC1.62□□□□□ -2.15
CX3CR1P49238 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.62□□□□□ -2.15
CX3CR1P49238 AC026585.1-201ENST00000619582 524 ntBASIC1.62□□□□□ -2.15
CX3CR1P49238 RMST_7.1-201ENST00000621935 268 ntBASIC1.62□□□□□ -2.15
CX3CR1P49238 Z69908.1-201ENST00000622603 247 ntBASIC1.62□□□□□ -2.15
CX3CR1P49238 AC007792.1-201ENST00000623023 402 ntBASIC1.62□□□□□ -2.15
CX3CR1P49238 AC078883.4-201ENST00000623218 367 ntBASIC1.62□□□□□ -2.15
CX3CR1P49238 MIR3974-201ENST00000637126 96 ntBASIC1.62□□□□□ -2.15
CX3CR1P49238 MTND5P17-201ENST00000418405 1603 ntBASIC1.62□□□□□ -2.15
CX3CR1P49238 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.62□□□□□ -2.15
CX3CR1P49238 U8.2-201ENST00000363156 134 ntBASIC1.61□□□□□ -2.15
CX3CR1P49238 Y_RNA.159-201ENST00000363674 87 ntBASIC1.61□□□□□ -2.15
CX3CR1P49238 RNU6-743P-201ENST00000364151 106 ntBASIC1.61□□□□□ -2.15
CX3CR1P49238 RNU6-1029P-201ENST00000384109 107 ntBASIC1.61□□□□□ -2.15
CX3CR1P49238 MIR597-201ENST00000384968 97 ntBASIC1.61□□□□□ -2.15
CX3CR1P49238 MIR454-201ENST00000390180 115 ntBASIC1.61□□□□□ -2.15
CX3CR1P49238 RNA5SP465-201ENST00000391195 109 ntBASIC1.61□□□□□ -2.15
CX3CR1P49238 AC068050.1-201ENST00000394891 380 ntBASIC1.61□□□□□ -2.15
CX3CR1P49238 AC019129.1-201ENST00000403786 261 ntBASIC1.61□□□□□ -2.15
CX3CR1P49238 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.61□□□□□ -2.15
CX3CR1P49238 AL445685.2-201ENST00000422551 342 ntBASIC1.61□□□□□ -2.15
CX3CR1P49238 MTATP6P17-201ENST00000431030 672 ntBASIC1.61□□□□□ -2.15
CX3CR1P49238 KATNBL1P3-201ENST00000443475 909 ntBASIC1.61□□□□□ -2.15
CX3CR1P49238 MTCO1P19-201ENST00000443487 500 ntBASIC1.61□□□□□ -2.15
CX3CR1P49238 AC132479.1-201ENST00000449160 144 ntBASIC1.61□□□□□ -2.15
CX3CR1P49238 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms