Protein–RNA interactions for Protein: P39060

COL18A1, Collagen alpha-1(XVIII) chain, humanhuman

Predictions only

Length 1,754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1P39060 RNU6-1242P-201ENST00000391052 103 ntBASIC1.25□□□□□ -2.21
COL18A1P39060 FCF1P10-201ENST00000407590 479 ntBASIC1.25□□□□□ -2.21
COL18A1P39060 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.25□□□□□ -2.21
COL18A1P39060 AC137499.1-201ENST00000427602 88 ntBASIC1.25□□□□□ -2.21
COL18A1P39060 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.25□□□□□ -2.21
COL18A1P39060 MTND6P13-201ENST00000443510 523 ntBASIC1.25□□□□□ -2.21
COL18A1P39060 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.25□□□□□ -2.21
COL18A1P39060 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC1.25□□□□□ -2.21
COL18A1P39060 HMGB1P35-201ENST00000503360 598 ntBASIC1.25□□□□□ -2.21
COL18A1P39060 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC1.25□□□□□ -2.21
COL18A1P39060 OR5B19P-201ENST00000531766 928 ntBASIC1.25□□□□□ -2.21
COL18A1P39060 CBX3P8-201ENST00000532412 525 ntBASIC1.25□□□□□ -2.21
COL18A1P39060 AC233702.2-202ENST00000562547 291 ntBASIC1.25□□□□□ -2.21
COL18A1P39060 AC092325.1-201ENST00000566449 554 ntBASIC1.25□□□□□ -2.21
COL18A1P39060 MIR4698-201ENST00000577795 80 ntBASIC1.25□□□□□ -2.21
COL18A1P39060 AC021646.1-201ENST00000605469 484 ntBASIC1.25□□□□□ -2.21
COL18A1P39060 AC103706.2-201ENST00000638080 240 ntBASIC1.25□□□□□ -2.21
COL18A1P39060 MTND4P9-201ENST00000507819 1346 ntBASIC1.24□□□□□ -2.21
COL18A1P39060 AC073343.1-201ENST00000328239 651 ntBASIC1.24□□□□□ -2.21
COL18A1P39060 RNU6-1010P-201ENST00000362757 107 ntBASIC1.24□□□□□ -2.21
COL18A1P39060 RNU1-72P-201ENST00000362976 153 ntBASIC1.24□□□□□ -2.21
COL18A1P39060 Y_RNA.115-201ENST00000363272 98 ntBASIC1.24□□□□□ -2.21
COL18A1P39060 RNU6-931P-201ENST00000363850 107 ntBASIC1.24□□□□□ -2.21
COL18A1P39060 RNU6-906P-201ENST00000384700 70 ntBASIC1.24□□□□□ -2.21
COL18A1P39060 RPS20P2-201ENST00000402520 389 ntBASIC1.24□□□□□ -2.21
COL18A1P39060 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.24□□□□□ -2.21
COL18A1P39060 AL627311.1-201ENST00000431514 115 ntBASIC1.24□□□□□ -2.21
COL18A1P39060 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.24□□□□□ -2.21
COL18A1P39060 AC245102.2-201ENST00000448956 180 ntBASIC1.24□□□□□ -2.21
COL18A1P39060 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC1.24□□□□□ -2.21
COL18A1P39060 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
COL18A1P39060 AC034114.1-201ENST00000520293 285 ntBASIC1.24□□□□□ -2.21
COL18A1P39060 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC1.24□□□□□ -2.21
COL18A1P39060 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.24□□□□□ -2.21
COL18A1P39060 FAM71BP1-201ENST00000604431 523 ntBASIC1.24□□□□□ -2.21
COL18A1P39060 NDUFA8P1-201ENST00000605525 367 ntBASIC1.24□□□□□ -2.21
COL18A1P39060 AC098614.4-201ENST00000607601 462 ntBASIC1.24□□□□□ -2.21
COL18A1P39060 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.24□□□□□ -2.21
COL18A1P39060 AC022202.1-201ENST00000613515 211 ntBASIC1.24□□□□□ -2.21
COL18A1P39060 AL359547.2-201ENST00000615810 418 ntBASIC1.24□□□□□ -2.21
COL18A1P39060 HAUS6P2-201ENST00000433254 2404 ntBASIC1.24□□□□□ -2.21
COL18A1P39060 RNU6-511P-201ENST00000363496 107 ntBASIC1.24□□□□□ -2.21
COL18A1P39060 RNU6-843P-201ENST00000384454 104 ntBASIC1.24□□□□□ -2.21
COL18A1P39060 MIR29C-201ENST00000385231 88 ntBASIC1.24□□□□□ -2.21
COL18A1P39060 RNA5SP390-201ENST00000410191 113 ntBASIC1.24□□□□□ -2.21
COL18A1P39060 AC244636.1-201ENST00000421152 228 ntBASIC1.24□□□□□ -2.21
COL18A1P39060 AL365338.1-201ENST00000422282 858 ntBASIC1.24□□□□□ -2.21
COL18A1P39060 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.24□□□□□ -2.21
COL18A1P39060 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC1.24□□□□□ -2.21
COL18A1P39060 MTND1P20-201ENST00000430341 950 ntBASIC1.24□□□□□ -2.21
COL18A1P39060 RPL22P17-201ENST00000438729 315 ntBASIC1.24□□□□□ -2.21
COL18A1P39060 AC006512.1-201ENST00000468816 291 ntBASIC1.24□□□□□ -2.21
COL18A1P39060 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.24□□□□□ -2.21
COL18A1P39060 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.24□□□□□ -2.21
COL18A1P39060 AC108078.1-201ENST00000508073 725 ntBASIC1.24□□□□□ -2.21
COL18A1P39060 RNU2-53P-201ENST00000516257 147 ntBASIC1.24□□□□□ -2.21
COL18A1P39060 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC1.24□□□□□ -2.21
COL18A1P39060 AC123904.2-201ENST00000548059 300 ntBASIC1.24□□□□□ -2.21
COL18A1P39060 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.24□□□□□ -2.21
COL18A1P39060 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC1.24□□□□□ -2.21
COL18A1P39060 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.24□□□□□ -2.21
COL18A1P39060 BNIP3P40-201ENST00000596017 556 ntBASIC1.24□□□□□ -2.21
COL18A1P39060 AL359314.1-201ENST00000616913 261 ntBASIC1.24□□□□□ -2.21
COL18A1P39060 AP002782.1-201ENST00000623107 614 ntBASIC1.24□□□□□ -2.21
COL18A1P39060 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC1.24□□□□□ -2.21
COL18A1P39060 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.24□□□□□ -2.21
COL18A1P39060 AC091812.1-201ENST00000432235 1948 ntBASIC1.23□□□□□ -2.21
COL18A1P39060 MIR412-201ENST00000362142 91 ntBASIC1.23□□□□□ -2.21
COL18A1P39060 MIR518A2-201ENST00000384966 87 ntBASIC1.23□□□□□ -2.21
COL18A1P39060 RNU2-36P-201ENST00000410361 191 ntBASIC1.23□□□□□ -2.21
COL18A1P39060 RNA5SP450-201ENST00000411206 102 ntBASIC1.23□□□□□ -2.21
COL18A1P39060 TRIM60P10Y-201ENST00000425589 751 ntBASIC1.23□□□□□ -2.21
COL18A1P39060 RPL23AP30-201ENST00000432419 501 ntBASIC1.23□□□□□ -2.21
COL18A1P39060 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.23□□□□□ -2.21
COL18A1P39060 AC092989.1-201ENST00000481235 277 ntBASIC1.23□□□□□ -2.21
COL18A1P39060 AC018868.1-201ENST00000491307 315 ntBASIC1.23□□□□□ -2.21
COL18A1P39060 RNU5A-4P-201ENST00000516588 111 ntBASIC1.23□□□□□ -2.21
COL18A1P39060 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC1.23□□□□□ -2.21
COL18A1P39060 AC090888.2-201ENST00000559765 1144 ntBASIC1.23□□□□□ -2.21
COL18A1P39060 MIR1273G-201ENST00000577677 100 ntBASIC1.23□□□□□ -2.21
COL18A1P39060 AC007792.1-201ENST00000623023 402 ntBASIC1.23□□□□□ -2.21
COL18A1P39060 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.22□□□□□ -2.21
COL18A1P39060 MIR193B-201ENST00000384907 83 ntBASIC1.22□□□□□ -2.21
COL18A1P39060 AL591034.2-201ENST00000402839 359 ntBASIC1.22□□□□□ -2.21
COL18A1P39060 Y_RNA.623-201ENST00000411128 95 ntBASIC1.22□□□□□ -2.21
COL18A1P39060 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC1.22□□□□□ -2.21
COL18A1P39060 MTCO3P5-201ENST00000433620 714 ntBASIC1.22□□□□□ -2.21
COL18A1P39060 NDUFB1P2-201ENST00000449477 176 ntBASIC1.22□□□□□ -2.21
COL18A1P39060 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.22□□□□□ -2.21
COL18A1P39060 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC1.22□□□□□ -2.21
COL18A1P39060 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.22□□□□□ -2.21
COL18A1P39060 AC116347.2-201ENST00000514912 523 ntBASIC1.22□□□□□ -2.21
COL18A1P39060 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.22□□□□□ -2.21
COL18A1P39060 AC107934.1-201ENST00000522215 217 ntBASIC1.22□□□□□ -2.21
COL18A1P39060 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.22□□□□□ -2.21
COL18A1P39060 MIR3118-1-201ENST00000581787 76 ntBASIC1.22□□□□□ -2.21
COL18A1P39060 MIR4999-201ENST00000585029 91 ntBASIC1.22□□□□□ -2.21
COL18A1P39060 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.22□□□□□ -2.21
COL18A1P39060 AL512605.2-201ENST00000592972 256 ntBASIC1.22□□□□□ -2.21
COL18A1P39060 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms