Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 AP003168.1-201ENST00000530091 307 ntBASIC1.04□□□□□ -2.24
CD40LGP29965 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
CD40LGP29965 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.04□□□□□ -2.24
CD40LGP29965 AC091135.1-201ENST00000585943 307 ntBASIC1.04□□□□□ -2.24
CD40LGP29965 AL391001.1-201ENST00000602747 715 ntBASIC1.04□□□□□ -2.24
CD40LGP29965 AC091965.4-201ENST00000607691 587 ntBASIC1.04□□□□□ -2.24
CD40LGP29965 MIR6078-201ENST00000611069 100 ntBASIC1.04□□□□□ -2.24
CD40LGP29965 PART1_2.1-201ENST00000612397 250 ntBASIC1.04□□□□□ -2.24
CD40LGP29965 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
CD40LGP29965 RNU6-960P-201ENST00000364056 120 ntBASIC1.03□□□□□ -2.24
CD40LGP29965 RNU6-723P-201ENST00000383973 107 ntBASIC1.03□□□□□ -2.24
CD40LGP29965 Y_RNA.465-201ENST00000384293 102 ntBASIC1.03□□□□□ -2.24
CD40LGP29965 MIR520A-201ENST00000384862 85 ntBASIC1.03□□□□□ -2.24
CD40LGP29965 RNU4-62P-201ENST00000410125 130 ntBASIC1.03□□□□□ -2.24
CD40LGP29965 AC092648.1-201ENST00000425870 423 ntBASIC1.03□□□□□ -2.24
CD40LGP29965 DYNLT3P2-201ENST00000442517 295 ntBASIC1.03□□□□□ -2.24
CD40LGP29965 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.03□□□□□ -2.24
CD40LGP29965 RPS27AP8-201ENST00000452665 445 ntBASIC1.03□□□□□ -2.24
CD40LGP29965 AC097473.1-201ENST00000508142 408 ntBASIC1.03□□□□□ -2.24
CD40LGP29965 AC112206.3-201ENST00000514578 389 ntBASIC1.03□□□□□ -2.24
CD40LGP29965 RNU7-40P-201ENST00000516397 64 ntBASIC1.03□□□□□ -2.24
CD40LGP29965 Y_RNA.687-201ENST00000516558 91 ntBASIC1.03□□□□□ -2.24
CD40LGP29965 Y_RNA.689-201ENST00000516589 107 ntBASIC1.03□□□□□ -2.24
CD40LGP29965 AC019176.1-201ENST00000518519 225 ntBASIC1.03□□□□□ -2.24
CD40LGP29965 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC1.03□□□□□ -2.24
CD40LGP29965 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC1.03□□□□□ -2.24
CD40LGP29965 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.03□□□□□ -2.24
CD40LGP29965 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.03□□□□□ -2.24
CD40LGP29965 MIR3146-201ENST00000580367 79 ntBASIC1.03□□□□□ -2.24
CD40LGP29965 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.03□□□□□ -2.24
CD40LGP29965 uc_338.12-201ENST00000616344 181 ntBASIC1.03□□□□□ -2.24
CD40LGP29965 AL353770.2-201ENST00000620024 78 ntBASIC1.03□□□□□ -2.24
CD40LGP29965 AL391987.6-201ENST00000305671 199 ntBASIC1.02□□□□□ -2.25
CD40LGP29965 RNU4-91P-201ENST00000364778 135 ntBASIC1.02□□□□□ -2.25
CD40LGP29965 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.02□□□□□ -2.25
CD40LGP29965 MRPL35P1-201ENST00000404272 572 ntBASIC1.02□□□□□ -2.25
CD40LGP29965 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.02□□□□□ -2.25
CD40LGP29965 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC1.02□□□□□ -2.25
CD40LGP29965 AL161935.2-201ENST00000414627 60 ntBASIC1.02□□□□□ -2.25
CD40LGP29965 MTND4P20-201ENST00000424125 869 ntBASIC1.02□□□□□ -2.25
CD40LGP29965 FTH1P25-201ENST00000447665 469 ntBASIC1.02□□□□□ -2.25
CD40LGP29965 SNRPFP4-201ENST00000456366 242 ntBASIC1.02□□□□□ -2.25
CD40LGP29965 RNA5SP269-201ENST00000459032 137 ntBASIC1.02□□□□□ -2.25
CD40LGP29965 RNU7-95P-201ENST00000459222 64 ntBASIC1.02□□□□□ -2.25
CD40LGP29965 RPS23P4-201ENST00000487908 423 ntBASIC1.02□□□□□ -2.25
CD40LGP29965 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.02□□□□□ -2.25
CD40LGP29965 AC010587.2-201ENST00000511727 448 ntBASIC1.02□□□□□ -2.25
CD40LGP29965 RNA5SP404-201ENST00000517118 132 ntBASIC1.02□□□□□ -2.25
CD40LGP29965 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.02□□□□□ -2.25
CD40LGP29965 AC013828.2-201ENST00000532487 235 ntBASIC1.02□□□□□ -2.25
CD40LGP29965 AC068587.4-201ENST00000533893 186 ntBASIC1.02□□□□□ -2.25
CD40LGP29965 BNIP3P6-201ENST00000549284 499 ntBASIC1.02□□□□□ -2.25
CD40LGP29965 MTND5P35-201ENST00000557537 1720 ntBASIC1.02□□□□□ -2.25
CD40LGP29965 CYP3A52P-201ENST00000563326 91 ntBASIC1.02□□□□□ -2.25
CD40LGP29965 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC1.02□□□□□ -2.25
CD40LGP29965 AC015688.6-201ENST00000577737 104 ntBASIC1.02□□□□□ -2.25
CD40LGP29965 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC1.02□□□□□ -2.25
CD40LGP29965 AP003465.2-201ENST00000602571 373 ntBASIC1.02□□□□□ -2.25
CD40LGP29965 AC112220.3-201ENST00000605502 502 ntBASIC1.02□□□□□ -2.25
CD40LGP29965 U6.42-201ENST00000618440 107 ntBASIC1.02□□□□□ -2.25
CD40LGP29965 AC095038.3-201ENST00000634439 195 ntBASIC1.02□□□□□ -2.25
CD40LGP29965 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
CD40LGP29965 SNORD56.1-201ENST00000362913 68 ntBASIC1.01□□□□□ -2.25
CD40LGP29965 RNU6-433P-201ENST00000363216 104 ntBASIC1.01□□□□□ -2.25
CD40LGP29965 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
CD40LGP29965 RNU6-1065P-201ENST00000384513 106 ntBASIC1.01□□□□□ -2.25
CD40LGP29965 RNU6-1257P-201ENST00000384625 110 ntBASIC1.01□□□□□ -2.25
CD40LGP29965 BTF3P4-201ENST00000418852 495 ntBASIC1.01□□□□□ -2.25
CD40LGP29965 AC123900.1-201ENST00000420390 96 ntBASIC1.01□□□□□ -2.25
CD40LGP29965 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC1.01□□□□□ -2.25
CD40LGP29965 MTND2P31-201ENST00000512602 616 ntBASIC1.01□□□□□ -2.25
CD40LGP29965 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC1.01□□□□□ -2.25
CD40LGP29965 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.01□□□□□ -2.25
CD40LGP29965 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC1.01□□□□□ -2.25
CD40LGP29965 HMGB1P33-201ENST00000563485 527 ntBASIC1.01□□□□□ -2.25
CD40LGP29965 MTND4LP25-201ENST00000570218 163 ntBASIC1.01□□□□□ -2.25
CD40LGP29965 VN1R80P-201ENST00000597126 338 ntBASIC1.01□□□□□ -2.25
CD40LGP29965 MTND3P19-201ENST00000603825 345 ntBASIC1.01□□□□□ -2.25
CD40LGP29965 BNIP3P31-201ENST00000604515 566 ntBASIC1.01□□□□□ -2.25
CD40LGP29965 AC108747.1-201ENST00000609508 535 ntBASIC1.01□□□□□ -2.25
CD40LGP29965 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1□□□□□ -2.25
CD40LGP29965 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1□□□□□ -2.25
CD40LGP29965 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1□□□□□ -2.25
CD40LGP29965 SNORD32B-201ENST00000364460 84 ntBASIC1□□□□□ -2.25
CD40LGP29965 SNORA40.6-201ENST00000391153 128 ntBASIC1□□□□□ -2.25
CD40LGP29965 RPL23AP32-201ENST00000395315 459 ntBASIC1□□□□□ -2.25
CD40LGP29965 PIGPP2-201ENST00000411569 458 ntBASIC1□□□□□ -2.25
CD40LGP29965 AC004965.1-201ENST00000413033 213 ntBASIC1□□□□□ -2.25
CD40LGP29965 OR6C66P-201ENST00000414917 930 ntBASIC1□□□□□ -2.25
CD40LGP29965 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC1□□□□□ -2.25
CD40LGP29965 AL008629.1-201ENST00000438615 184 ntBASIC1□□□□□ -2.25
CD40LGP29965 RPL39P29-201ENST00000447779 157 ntBASIC1□□□□□ -2.25
CD40LGP29965 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1□□□□□ -2.25
CD40LGP29965 AC016550.1-201ENST00000505348 785 ntBASIC1□□□□□ -2.25
CD40LGP29965 AC005741.1-201ENST00000511094 432 ntBASIC1□□□□□ -2.25
CD40LGP29965 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1□□□□□ -2.25
CD40LGP29965 AC108729.3-201ENST00000513484 108 ntBASIC1□□□□□ -2.25
CD40LGP29965 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1□□□□□ -2.25
CD40LGP29965 AC010376.1-201ENST00000522101 334 ntBASIC1□□□□□ -2.25
CD40LGP29965 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 124.1 ms