Protein–RNA interactions for Protein: P29074

PTPN4, Tyrosine-protein phosphatase non-receptor type 4, humanhuman

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4P29074 RNU1-86P-201ENST00000516108 154 ntBASIC2.17□□□□□ -2.06
PTPN4P29074 RNU1-107P-201ENST00000516617 154 ntBASIC2.17□□□□□ -2.06
PTPN4P29074 RN7SKP219-201ENST00000516825 296 ntBASIC2.17□□□□□ -2.06
PTPN4P29074 MIR4529-201ENST00000578110 78 ntBASIC2.17□□□□□ -2.06
PTPN4P29074 MTATP6P3-201ENST00000581686 676 ntBASIC2.17□□□□□ -2.06
PTPN4P29074 AC073539.2-201ENST00000597113 165 ntBASIC2.17□□□□□ -2.06
PTPN4P29074 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.17□□□□□ -2.06
PTPN4P29074 AC073410.2-201ENST00000603240 332 ntBASIC2.17□□□□□ -2.06
PTPN4P29074 AL136363.2-201ENST00000604173 851 ntBASIC2.17□□□□□ -2.06
PTPN4P29074 AC017083.3-201ENST00000609955 700 ntBASIC2.17□□□□□ -2.06
PTPN4P29074 AC026585.1-201ENST00000619582 524 ntBASIC2.17□□□□□ -2.06
PTPN4P29074 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.17□□□□□ -2.06
PTPN4P29074 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
PTPN4P29074 RNU6-529P-201ENST00000363383 104 ntBASIC2.16□□□□□ -2.06
PTPN4P29074 RNU1-57P-201ENST00000384491 166 ntBASIC2.16□□□□□ -2.06
PTPN4P29074 RNU6-1158P-201ENST00000391167 107 ntBASIC2.16□□□□□ -2.06
PTPN4P29074 RNU4-26P-201ENST00000410270 107 ntBASIC2.16□□□□□ -2.06
PTPN4P29074 OR9R1P-201ENST00000412200 877 ntBASIC2.16□□□□□ -2.06
PTPN4P29074 MTCO3P41-201ENST00000414801 328 ntBASIC2.16□□□□□ -2.06
PTPN4P29074 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.16□□□□□ -2.06
PTPN4P29074 AL669831.1-202ENST00000428504 417 ntBASIC2.16□□□□□ -2.06
PTPN4P29074 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.16□□□□□ -2.06
PTPN4P29074 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC2.16□□□□□ -2.06
PTPN4P29074 GTF2IP13-201ENST00000438487 386 ntBASIC2.16□□□□□ -2.06
PTPN4P29074 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC2.16□□□□□ -2.06
PTPN4P29074 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC2.16□□□□□ -2.06
PTPN4P29074 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.16□□□□□ -2.06
PTPN4P29074 RNU7-63P-201ENST00000459054 62 ntBASIC2.16□□□□□ -2.06
PTPN4P29074 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC2.16□□□□□ -2.06
PTPN4P29074 RPL9P6-201ENST00000492764 598 ntBASIC2.16□□□□□ -2.06
PTPN4P29074 AC107401.1-201ENST00000503426 685 ntBASIC2.16□□□□□ -2.06
PTPN4P29074 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC2.16□□□□□ -2.06
PTPN4P29074 AC025678.1-201ENST00000567861 338 ntBASIC2.16□□□□□ -2.06
PTPN4P29074 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.16□□□□□ -2.06
PTPN4P29074 AC078795.2-201ENST00000602835 1252 ntBASIC2.16□□□□□ -2.06
PTPN4P29074 AP001596.2-201ENST00000608410 312 ntBASIC2.16□□□□□ -2.06
PTPN4P29074 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.16□□□□□ -2.06
PTPN4P29074 AC010378.1-201ENST00000619270 362 ntBASIC2.16□□□□□ -2.06
PTPN4P29074 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
PTPN4P29074 RBBP8P1-201ENST00000449447 1844 ntBASIC2.15□□□□□ -2.06
PTPN4P29074 Y_RNA.41-201ENST00000362646 102 ntBASIC2.15□□□□□ -2.07
PTPN4P29074 RNU6-942P-201ENST00000363002 107 ntBASIC2.15□□□□□ -2.07
PTPN4P29074 RNU6-715P-201ENST00000365204 103 ntBASIC2.15□□□□□ -2.07
PTPN4P29074 Y_RNA.381-201ENST00000365666 102 ntBASIC2.15□□□□□ -2.07
PTPN4P29074 RNU6-45P-201ENST00000384471 107 ntBASIC2.15□□□□□ -2.07
PTPN4P29074 Y_RNA.517-201ENST00000384551 106 ntBASIC2.15□□□□□ -2.07
PTPN4P29074 SNORD116-4-201ENST00000384733 96 ntBASIC2.15□□□□□ -2.07
PTPN4P29074 MIR561-201ENST00000385216 97 ntBASIC2.15□□□□□ -2.07
PTPN4P29074 RNU6-903P-201ENST00000391270 109 ntBASIC2.15□□□□□ -2.07
PTPN4P29074 RNU2-29P-201ENST00000410423 189 ntBASIC2.15□□□□□ -2.07
PTPN4P29074 UBE2V1P10-201ENST00000414685 269 ntBASIC2.15□□□□□ -2.07
PTPN4P29074 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.15□□□□□ -2.07
PTPN4P29074 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC2.15□□□□□ -2.07
PTPN4P29074 AIMP1P2-201ENST00000425294 312 ntBASIC2.15□□□□□ -2.07
PTPN4P29074 AC018634.1-201ENST00000437554 401 ntBASIC2.15□□□□□ -2.07
PTPN4P29074 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2.15□□□□□ -2.07
PTPN4P29074 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC2.15□□□□□ -2.07
PTPN4P29074 AC140059.1-201ENST00000489238 361 ntBASIC2.15□□□□□ -2.07
PTPN4P29074 MTND3P25-201ENST00000509243 135 ntBASIC2.15□□□□□ -2.07
PTPN4P29074 AC074344.1-201ENST00000512823 224 ntBASIC2.15□□□□□ -2.07
PTPN4P29074 SNORA25.11-201ENST00000515935 105 ntBASIC2.15□□□□□ -2.07
PTPN4P29074 RNU6-237P-201ENST00000515985 71 ntBASIC2.15□□□□□ -2.07
PTPN4P29074 RNU6-1178P-201ENST00000516674 107 ntBASIC2.15□□□□□ -2.07
PTPN4P29074 AP003034.1-201ENST00000534621 422 ntBASIC2.15□□□□□ -2.07
PTPN4P29074 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.15□□□□□ -2.07
PTPN4P29074 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC2.15□□□□□ -2.07
PTPN4P29074 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.15□□□□□ -2.07
PTPN4P29074 MIR4448-201ENST00000584360 86 ntBASIC2.15□□□□□ -2.07
PTPN4P29074 AC004223.2-201ENST00000590309 544 ntBASIC2.15□□□□□ -2.07
PTPN4P29074 AP001330.5-201ENST00000607176 411 ntBASIC2.15□□□□□ -2.07
PTPN4P29074 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.15□□□□□ -2.07
PTPN4P29074 AC009233.1-201ENST00000616477 371 ntBASIC2.15□□□□□ -2.07
PTPN4P29074 AL158209.2-201ENST00000619266 216 ntBASIC2.15□□□□□ -2.07
PTPN4P29074 AC068792.1-201ENST00000621354 417 ntBASIC2.15□□□□□ -2.07
PTPN4P29074 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.15□□□□□ -2.07
PTPN4P29074 MIR6863-201ENST00000636112 90 ntBASIC2.15□□□□□ -2.07
PTPN4P29074 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
PTPN4P29074 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.15□□□□□ -2.07
PTPN4P29074 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.14□□□□□ -2.07
PTPN4P29074 RNU6-552P-201ENST00000362869 119 ntBASIC2.14□□□□□ -2.07
PTPN4P29074 RNU6-996P-201ENST00000365438 107 ntBASIC2.14□□□□□ -2.07
PTPN4P29074 RNU6-607P-201ENST00000411283 108 ntBASIC2.14□□□□□ -2.07
PTPN4P29074 MTCYBP8-201ENST00000422855 651 ntBASIC2.14□□□□□ -2.07
PTPN4P29074 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.14□□□□□ -2.07
PTPN4P29074 CALM1P1-201ENST00000442082 433 ntBASIC2.14□□□□□ -2.07
PTPN4P29074 GPM6BP3-201ENST00000442797 145 ntBASIC2.14□□□□□ -2.07
PTPN4P29074 AC073415.1-201ENST00000449240 153 ntBASIC2.14□□□□□ -2.07
PTPN4P29074 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.14□□□□□ -2.07
PTPN4P29074 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.14□□□□□ -2.07
PTPN4P29074 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.14□□□□□ -2.07
PTPN4P29074 Y_RNA.687-201ENST00000516558 91 ntBASIC2.14□□□□□ -2.07
PTPN4P29074 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.14□□□□□ -2.07
PTPN4P29074 LRRC37A5P-203ENST00000580181 585 ntBASIC2.14□□□□□ -2.07
PTPN4P29074 MIR4524B-201ENST00000581569 115 ntBASIC2.14□□□□□ -2.07
PTPN4P29074 AC012507.3-201ENST00000603556 477 ntBASIC2.14□□□□□ -2.07
PTPN4P29074 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.14□□□□□ -2.07
PTPN4P29074 uc_338.15-201ENST00000615470 191 ntBASIC2.14□□□□□ -2.07
PTPN4P29074 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2.14□□□□□ -2.07
PTPN4P29074 AC015540.1-201ENST00000615828 501 ntBASIC2.14□□□□□ -2.07
PTPN4P29074 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 193.2 ms