Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.36□□□□□ -2.19
HLA-DMAP28067 AC092436.1-201ENST00000506450 503 ntBASIC1.36□□□□□ -2.19
HLA-DMAP28067 AC104806.1-201ENST00000508720 308 ntBASIC1.36□□□□□ -2.19
HLA-DMAP28067 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC1.36□□□□□ -2.19
HLA-DMAP28067 RNU6-965P-201ENST00000516721 96 ntBASIC1.36□□□□□ -2.19
HLA-DMAP28067 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC1.36□□□□□ -2.19
HLA-DMAP28067 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.36□□□□□ -2.19
HLA-DMAP28067 AP003392.2-201ENST00000527269 208 ntBASIC1.36□□□□□ -2.19
HLA-DMAP28067 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.36□□□□□ -2.19
HLA-DMAP28067 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.36□□□□□ -2.19
HLA-DMAP28067 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.36□□□□□ -2.19
HLA-DMAP28067 AC004908.3-201ENST00000610248 625 ntBASIC1.36□□□□□ -2.19
HLA-DMAP28067 AC097372.5-201ENST00000623665 376 ntBASIC1.36□□□□□ -2.19
HLA-DMAP28067 AC090517.3-201ENST00000625170 141 ntBASIC1.36□□□□□ -2.19
HLA-DMAP28067 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.36□□□□□ -2.19
HLA-DMAP28067 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
HLA-DMAP28067 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
HLA-DMAP28067 ANKRD20A17P-201ENST00000511745 1330 ntBASIC1.36□□□□□ -2.19
HLA-DMAP28067 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
HLA-DMAP28067 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
HLA-DMAP28067 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
HLA-DMAP28067 snoU2_19.1-201ENST00000362361 80 ntBASIC1.35□□□□□ -2.19
HLA-DMAP28067 U8.2-201ENST00000363156 134 ntBASIC1.35□□□□□ -2.19
HLA-DMAP28067 RNU6-179P-201ENST00000363350 107 ntBASIC1.35□□□□□ -2.19
HLA-DMAP28067 RNY1P12-201ENST00000364251 105 ntBASIC1.35□□□□□ -2.19
HLA-DMAP28067 RNU6-1303P-201ENST00000364841 107 ntBASIC1.35□□□□□ -2.19
HLA-DMAP28067 Y_RNA.367-201ENST00000365544 101 ntBASIC1.35□□□□□ -2.19
HLA-DMAP28067 MT-TH-201ENST00000387441 69 ntBASIC1.35□□□□□ -2.19
HLA-DMAP28067 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
HLA-DMAP28067 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
HLA-DMAP28067 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
HLA-DMAP28067 RN7SKP192-201ENST00000411291 327 ntBASIC1.35□□□□□ -2.19
HLA-DMAP28067 BX295541.1-201ENST00000417774 250 ntBASIC1.35□□□□□ -2.19
HLA-DMAP28067 C1DP2-201ENST00000418167 426 ntBASIC1.35□□□□□ -2.19
HLA-DMAP28067 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.35□□□□□ -2.19
HLA-DMAP28067 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
HLA-DMAP28067 MTND4P20-201ENST00000424125 869 ntBASIC1.35□□□□□ -2.19
HLA-DMAP28067 MTCO3P46-201ENST00000425787 232 ntBASIC1.35□□□□□ -2.19
HLA-DMAP28067 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC1.35□□□□□ -2.19
HLA-DMAP28067 VN1R108P-201ENST00000431580 830 ntBASIC1.35□□□□□ -2.19
HLA-DMAP28067 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.35□□□□□ -2.19
HLA-DMAP28067 KATNBL1P3-201ENST00000443475 909 ntBASIC1.35□□□□□ -2.19
HLA-DMAP28067 AC104058.1-201ENST00000448028 297 ntBASIC1.35□□□□□ -2.19
HLA-DMAP28067 AL162395.1-201ENST00000457882 422 ntBASIC1.35□□□□□ -2.19
HLA-DMAP28067 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC1.35□□□□□ -2.19
HLA-DMAP28067 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC1.35□□□□□ -2.19
HLA-DMAP28067 Vault.3-201ENST00000516676 95 ntBASIC1.35□□□□□ -2.19
HLA-DMAP28067 AP005597.4-201ENST00000526762 229 ntBASIC1.35□□□□□ -2.19
HLA-DMAP28067 LRRC34P1-201ENST00000542742 915 ntBASIC1.35□□□□□ -2.19
HLA-DMAP28067 AC087883.1-201ENST00000551882 391 ntBASIC1.35□□□□□ -2.19
HLA-DMAP28067 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.35□□□□□ -2.19
HLA-DMAP28067 AC098848.2-201ENST00000588023 330 ntBASIC1.35□□□□□ -2.19
HLA-DMAP28067 AC010900.2-201ENST00000604508 210 ntBASIC1.35□□□□□ -2.19
HLA-DMAP28067 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.35□□□□□ -2.19
HLA-DMAP28067 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC1.35□□□□□ -2.19
HLA-DMAP28067 AC063943.3-201ENST00000615562 356 ntBASIC1.35□□□□□ -2.19
HLA-DMAP28067 AL132822.1-201ENST00000617063 513 ntBASIC1.35□□□□□ -2.19
HLA-DMAP28067 AC091304.6-201ENST00000619761 202 ntBASIC1.35□□□□□ -2.19
HLA-DMAP28067 AC084768.2-201ENST00000622736 221 ntBASIC1.35□□□□□ -2.19
HLA-DMAP28067 AL161722.3-201ENST00000605789 2983 ntBASIC1.34□□□□□ -2.19
HLA-DMAP28067 RNU6-661P-201ENST00000362409 107 ntBASIC1.34□□□□□ -2.19
HLA-DMAP28067 RNU1-58P-201ENST00000362413 163 ntBASIC1.34□□□□□ -2.19
HLA-DMAP28067 SNORA62.1-201ENST00000364287 154 ntBASIC1.34□□□□□ -2.19
HLA-DMAP28067 RNU6-282P-201ENST00000365357 103 ntBASIC1.34□□□□□ -2.19
HLA-DMAP28067 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
HLA-DMAP28067 SNORA40.18-201ENST00000391200 128 ntBASIC1.34□□□□□ -2.19
HLA-DMAP28067 SNORA26.8-201ENST00000391306 124 ntBASIC1.34□□□□□ -2.19
HLA-DMAP28067 RNU6-955P-201ENST00000410497 104 ntBASIC1.34□□□□□ -2.19
HLA-DMAP28067 RNU2-23P-201ENST00000410545 195 ntBASIC1.34□□□□□ -2.19
HLA-DMAP28067 RNA5SP501-201ENST00000410990 112 ntBASIC1.34□□□□□ -2.19
HLA-DMAP28067 RNU2-32P-201ENST00000411193 191 ntBASIC1.34□□□□□ -2.19
HLA-DMAP28067 SRIP3-201ENST00000413200 219 ntBASIC1.34□□□□□ -2.19
HLA-DMAP28067 OR6C66P-201ENST00000414917 930 ntBASIC1.34□□□□□ -2.19
HLA-DMAP28067 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.34□□□□□ -2.19
HLA-DMAP28067 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC1.34□□□□□ -2.19
HLA-DMAP28067 RPL7P54-201ENST00000438336 674 ntBASIC1.34□□□□□ -2.19
HLA-DMAP28067 AC007969.2-201ENST00000441891 191 ntBASIC1.34□□□□□ -2.19
HLA-DMAP28067 AC012308.1-201ENST00000451232 178 ntBASIC1.34□□□□□ -2.19
HLA-DMAP28067 AL122001.1-201ENST00000457027 370 ntBASIC1.34□□□□□ -2.19
HLA-DMAP28067 PRELID3BP1-201ENST00000457142 540 ntBASIC1.34□□□□□ -2.19
HLA-DMAP28067 RPS29P23-201ENST00000458635 123 ntBASIC1.34□□□□□ -2.19
HLA-DMAP28067 MTCYBP40-201ENST00000509390 1135 ntBASIC1.34□□□□□ -2.19
HLA-DMAP28067 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.34□□□□□ -2.19
HLA-DMAP28067 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.34□□□□□ -2.19
HLA-DMAP28067 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.34□□□□□ -2.19
HLA-DMAP28067 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.34□□□□□ -2.19
HLA-DMAP28067 AL022345.1-201ENST00000607292 135 ntBASIC1.34□□□□□ -2.19
HLA-DMAP28067 AC026585.1-201ENST00000619582 524 ntBASIC1.34□□□□□ -2.19
HLA-DMAP28067 AL159153.1-201ENST00000619688 317 ntBASIC1.34□□□□□ -2.19
HLA-DMAP28067 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
HLA-DMAP28067 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
HLA-DMAP28067 RNU1-62P-201ENST00000362599 164 ntBASIC1.33□□□□□ -2.2
HLA-DMAP28067 RNU6-212P-201ENST00000362642 104 ntBASIC1.33□□□□□ -2.2
HLA-DMAP28067 RNU6-78P-201ENST00000362897 107 ntBASIC1.33□□□□□ -2.2
HLA-DMAP28067 RNU6-487P-201ENST00000365430 104 ntBASIC1.33□□□□□ -2.2
HLA-DMAP28067 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.33□□□□□ -2.2
HLA-DMAP28067 RNU6-550P-201ENST00000391057 101 ntBASIC1.33□□□□□ -2.2
HLA-DMAP28067 RNU6-607P-201ENST00000411283 108 ntBASIC1.33□□□□□ -2.2
HLA-DMAP28067 HMGN1P14-201ENST00000412459 517 ntBASIC1.33□□□□□ -2.2
HLA-DMAP28067 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms