Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 RNU6-713P-201ENST00000384761 107 ntBASIC3.32□□□□□ -1.88
CD40P25942 MIR200C-201ENST00000384980 68 ntBASIC3.32□□□□□ -1.88
CD40P25942 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
CD40P25942 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.32□□□□□ -1.88
CD40P25942 CYCSP48-201ENST00000417124 323 ntBASIC3.32□□□□□ -1.88
CD40P25942 AC004552.1-201ENST00000419089 348 ntBASIC3.32□□□□□ -1.88
CD40P25942 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.32□□□□□ -1.88
CD40P25942 AL139247.1-201ENST00000422768 325 ntBASIC3.32□□□□□ -1.88
CD40P25942 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CD40P25942 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.32□□□□□ -1.88
CD40P25942 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.32□□□□□ -1.88
CD40P25942 RPS26P3-201ENST00000470205 348 ntBASIC3.32□□□□□ -1.88
CD40P25942 AC090543.2-201ENST00000483963 348 ntBASIC3.32□□□□□ -1.88
CD40P25942 AC004057.1-201ENST00000485827 348 ntBASIC3.32□□□□□ -1.88
CD40P25942 RPL31P61-201ENST00000496160 376 ntBASIC3.32□□□□□ -1.88
CD40P25942 RNU5F-2P-201ENST00000516066 82 ntBASIC3.32□□□□□ -1.88
CD40P25942 SCARNA14-201ENST00000516903 136 ntBASIC3.32□□□□□ -1.88
CD40P25942 RNU6-897P-201ENST00000517135 105 ntBASIC3.32□□□□□ -1.88
CD40P25942 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.32□□□□□ -1.88
CD40P25942 AC022695.1-201ENST00000522089 237 ntBASIC3.32□□□□□ -1.88
CD40P25942 UBL5P4-201ENST00000562584 236 ntBASIC3.32□□□□□ -1.88
CD40P25942 MIR3671-201ENST00000580455 88 ntBASIC3.32□□□□□ -1.88
CD40P25942 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.32□□□□□ -1.88
CD40P25942 AC012603.1-201ENST00000606424 528 ntBASIC3.32□□□□□ -1.88
CD40P25942 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC3.32□□□□□ -1.88
CD40P25942 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.32□□□□□ -1.88
CD40P25942 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CD40P25942 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CD40P25942 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CD40P25942 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.32□□□□□ -1.88
CD40P25942 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.31□□□□□ -1.88
CD40P25942 AC091152.2-201ENST00000591628 2569 ntBASIC3.31□□□□□ -1.88
CD40P25942 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.31□□□□□ -1.88
CD40P25942 Y_RNA.26-201ENST00000362539 101 ntBASIC3.31□□□□□ -1.88
CD40P25942 RNU6-806P-201ENST00000365147 105 ntBASIC3.31□□□□□ -1.88
CD40P25942 CD24P4-201ENST00000382840 243 ntBASIC3.31□□□□□ -1.88
CD40P25942 Y_RNA.401-201ENST00000383965 117 ntBASIC3.31□□□□□ -1.88
CD40P25942 Y_RNA.458-201ENST00000384240 102 ntBASIC3.31□□□□□ -1.88
CD40P25942 MIR513A2-201ENST00000385249 127 ntBASIC3.31□□□□□ -1.88
CD40P25942 RNU1-139P-201ENST00000391307 165 ntBASIC3.31□□□□□ -1.88
CD40P25942 RNU6-130P-201ENST00000411112 103 ntBASIC3.31□□□□□ -1.88
CD40P25942 EIF1P2-201ENST00000428233 350 ntBASIC3.31□□□□□ -1.88
CD40P25942 WARS2P1-201ENST00000429678 537 ntBASIC3.31□□□□□ -1.88
CD40P25942 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.31□□□□□ -1.88
CD40P25942 AL731563.1-201ENST00000442202 214 ntBASIC3.31□□□□□ -1.88
CD40P25942 FCF1P4-201ENST00000448326 183 ntBASIC3.31□□□□□ -1.88
CD40P25942 RPL36AP48-201ENST00000485521 314 ntBASIC3.31□□□□□ -1.88
CD40P25942 AC093663.1-201ENST00000497190 394 ntBASIC3.31□□□□□ -1.88
CD40P25942 RNU6-1114P-201ENST00000516022 107 ntBASIC3.31□□□□□ -1.88
CD40P25942 HSPE1P20-201ENST00000538133 289 ntBASIC3.31□□□□□ -1.88
CD40P25942 MYL12BP1-201ENST00000569826 507 ntBASIC3.31□□□□□ -1.88
CD40P25942 MIR5695-201ENST00000579717 85 ntBASIC3.31□□□□□ -1.88
CD40P25942 MIR3136-201ENST00000583498 78 ntBASIC3.31□□□□□ -1.88
CD40P25942 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.31□□□□□ -1.88
CD40P25942 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.31□□□□□ -1.88
CD40P25942 AL121655.1-201ENST00000605811 308 ntBASIC3.31□□□□□ -1.88
CD40P25942 MIR92B-201ENST00000607575 96 ntBASIC3.31□□□□□ -1.88
CD40P25942 uc_338.14-201ENST00000613162 166 ntBASIC3.31□□□□□ -1.88
CD40P25942 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.31□□□□□ -1.88
CD40P25942 AC002064.3-201ENST00000623448 346 ntBASIC3.31□□□□□ -1.88
CD40P25942 NAA50-211ENST00000630058 177 ntTSL 5 BASIC3.31□□□□□ -1.88
CD40P25942 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.31□□□□□ -1.88
CD40P25942 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
CD40P25942 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CD40P25942 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CD40P25942 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CD40P25942 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CD40P25942 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.3□□□□□ -1.88
CD40P25942 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC3.3□□□□□ -1.88
CD40P25942 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
CD40P25942 RNA5SP124-201ENST00000362739 110 ntBASIC3.3□□□□□ -1.88
CD40P25942 RNU6-799P-201ENST00000363567 107 ntBASIC3.3□□□□□ -1.88
CD40P25942 Y_RNA.222-201ENST00000364264 102 ntBASIC3.3□□□□□ -1.88
CD40P25942 RNU4-56P-201ENST00000364700 142 ntBASIC3.3□□□□□ -1.88
CD40P25942 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC3.3□□□□□ -1.88
CD40P25942 U8.11-201ENST00000384699 133 ntBASIC3.3□□□□□ -1.88
CD40P25942 U8.12-201ENST00000384701 133 ntBASIC3.3□□□□□ -1.88
CD40P25942 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CD40P25942 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.3□□□□□ -1.88
CD40P25942 SDAD1P3-201ENST00000427380 333 ntBASIC3.3□□□□□ -1.88
CD40P25942 AC091286.1-201ENST00000431233 461 ntBASIC3.3□□□□□ -1.88
CD40P25942 Z98742.2-201ENST00000431564 187 ntBASIC3.3□□□□□ -1.88
CD40P25942 GOT2P5-201ENST00000433995 546 ntBASIC3.3□□□□□ -1.88
CD40P25942 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.3□□□□□ -1.88
CD40P25942 RPS15AP7-201ENST00000439294 405 ntBASIC3.3□□□□□ -1.88
CD40P25942 U8.18-201ENST00000459285 133 ntBASIC3.3□□□□□ -1.88
CD40P25942 AL133162.1-201ENST00000463228 453 ntBASIC3.3□□□□□ -1.88
CD40P25942 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.3□□□□□ -1.88
CD40P25942 HMGB1P35-201ENST00000503360 598 ntBASIC3.3□□□□□ -1.88
CD40P25942 RAC1P5-201ENST00000512182 576 ntBASIC3.3□□□□□ -1.88
CD40P25942 SNORA31.6-201ENST00000516241 130 ntBASIC3.3□□□□□ -1.88
CD40P25942 RNU6-567P-201ENST00000516746 107 ntBASIC3.3□□□□□ -1.88
CD40P25942 RNU6-58P-201ENST00000517143 103 ntBASIC3.3□□□□□ -1.88
CD40P25942 IGHV3-76-201ENST00000522465 295 ntBASIC3.3□□□□□ -1.88
CD40P25942 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CD40P25942 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.3□□□□□ -1.88
CD40P25942 AC074050.1-201ENST00000563247 211 ntBASIC3.3□□□□□ -1.88
CD40P25942 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.3□□□□□ -1.88
CD40P25942 AC006006.1-201ENST00000603082 144 ntBASIC3.3□□□□□ -1.88
CD40P25942 AC073410.2-201ENST00000603240 332 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 194.9 ms