Protein–RNA interactions for Protein: P25054

APC, Adenomatous polyposis coli protein, humanhuman

Predictions only

Length 2,843 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APCP25054 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.44□□□□□ -2.34
APCP25054 MTND5P15-201ENST00000434246 349 ntBASIC0.44□□□□□ -2.34
APCP25054 ZNF736P11Y-201ENST00000442535 1213 ntBASIC0.44□□□□□ -2.34
APCP25054 MTND6P13-201ENST00000443510 523 ntBASIC0.44□□□□□ -2.34
APCP25054 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.44□□□□□ -2.34
APCP25054 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
APCP25054 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC0.44□□□□□ -2.34
APCP25054 MED28P2-201ENST00000475771 317 ntBASIC0.44□□□□□ -2.34
APCP25054 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC0.44□□□□□ -2.34
APCP25054 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.44□□□□□ -2.34
APCP25054 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC0.44□□□□□ -2.34
APCP25054 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.44□□□□□ -2.34
APCP25054 SNORA3.4-201ENST00000515969 96 ntBASIC0.44□□□□□ -2.34
APCP25054 AC009902.1-201ENST00000519351 183 ntBASIC0.44□□□□□ -2.34
APCP25054 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC0.44□□□□□ -2.34
APCP25054 AP005639.2-201ENST00000527592 928 ntBASIC0.44□□□□□ -2.34
APCP25054 AC018630.3-201ENST00000542637 96 ntBASIC0.44□□□□□ -2.34
APCP25054 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC0.44□□□□□ -2.34
APCP25054 AC021171.1-201ENST00000603137 706 ntBASIC0.44□□□□□ -2.34
APCP25054 Pinc.1-201ENST00000616452 154 ntBASIC0.44□□□□□ -2.34
APCP25054 U4.2-201ENST00000618561 85 ntBASIC0.44□□□□□ -2.34
APCP25054 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC0.44□□□□□ -2.34
APCP25054 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
APCP25054 RNU5E-1-201ENST00000362477 120 ntBASIC0.44□□□□□ -2.34
APCP25054 MIR506-201ENST00000384998 124 ntBASIC0.44□□□□□ -2.34
APCP25054 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0.44□□□□□ -2.34
APCP25054 RPS3AP37-201ENST00000419176 745 ntBASIC0.44□□□□□ -2.34
APCP25054 NCOR1P3-201ENST00000420479 303 ntBASIC0.44□□□□□ -2.34
APCP25054 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC0.44□□□□□ -2.34
APCP25054 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC0.44□□□□□ -2.34
APCP25054 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC0.44□□□□□ -2.34
APCP25054 SUMO2P5-201ENST00000506790 245 ntBASIC0.44□□□□□ -2.34
APCP25054 RNU6-583P-201ENST00000516012 92 ntBASIC0.44□□□□□ -2.34
APCP25054 RNU6-390P-201ENST00000516259 103 ntBASIC0.44□□□□□ -2.34
APCP25054 RNA5SP291-201ENST00000517222 105 ntBASIC0.44□□□□□ -2.34
APCP25054 MIR3198-2-201ENST00000577868 80 ntBASIC0.44□□□□□ -2.34
APCP25054 CLIC4P2-201ENST00000601934 717 ntBASIC0.44□□□□□ -2.34
APCP25054 AL391813.1-201ENST00000603098 260 ntBASIC0.44□□□□□ -2.34
APCP25054 AP001485.1-201ENST00000604799 199 ntBASIC0.44□□□□□ -2.34
APCP25054 AC245297.2-201ENST00000610119 565 ntBASIC0.44□□□□□ -2.34
APCP25054 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC0.44□□□□□ -2.34
APCP25054 AL357075.2-201ENST00000614906 189 ntBASIC0.44□□□□□ -2.34
APCP25054 AC123767.1-202ENST00000620407 817 ntBASIC0.44□□□□□ -2.34
APCP25054 AC106858.1-201ENST00000637497 429 ntBASIC0.44□□□□□ -2.34
APCP25054 ATM-228ENST00000639240 498 ntTSL 5 BASIC0.44□□□□□ -2.34
APCP25054 MTND5P33-201ENST00000571250 1450 ntBASIC0.44□□□□□ -2.34
APCP25054 MTND4P16-201ENST00000466108 1367 ntBASIC0.44□□□□□ -2.34
APCP25054 RNU6-78P-201ENST00000362897 107 ntBASIC0.43□□□□□ -2.34
APCP25054 SNORD3E-201ENST00000362899 217 ntBASIC0.43□□□□□ -2.34
APCP25054 RNU6-560P-201ENST00000364007 108 ntBASIC0.43□□□□□ -2.34
APCP25054 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC0.43□□□□□ -2.34
APCP25054 RNU6-354P-201ENST00000383862 107 ntBASIC0.43□□□□□ -2.34
APCP25054 RNU6-610P-201ENST00000384264 107 ntBASIC0.43□□□□□ -2.34
APCP25054 SNORA12-201ENST00000391162 147 ntBASIC0.43□□□□□ -2.34
APCP25054 MIR1262-201ENST00000408276 93 ntBASIC0.43□□□□□ -2.34
APCP25054 AL590383.1-201ENST00000428602 75 ntBASIC0.43□□□□□ -2.34
APCP25054 AL627311.1-201ENST00000431514 115 ntBASIC0.43□□□□□ -2.34
APCP25054 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC0.43□□□□□ -2.34
APCP25054 UBE2V1P8-201ENST00000437166 265 ntBASIC0.43□□□□□ -2.34
APCP25054 RPL39P29-201ENST00000447779 157 ntBASIC0.43□□□□□ -2.34
APCP25054 PAXBP1P1-201ENST00000449315 447 ntBASIC0.43□□□□□ -2.34
APCP25054 GAPDHP17-201ENST00000449858 1001 ntBASIC0.43□□□□□ -2.34
APCP25054 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC0.43□□□□□ -2.34
APCP25054 USP9YP25-201ENST00000457708 443 ntBASIC0.43□□□□□ -2.34
APCP25054 AC023194.1-201ENST00000493084 308 ntBASIC0.43□□□□□ -2.34
APCP25054 TPT1P8-201ENST00000510120 555 ntBASIC0.43□□□□□ -2.34
APCP25054 AC105417.1-201ENST00000514691 285 ntBASIC0.43□□□□□ -2.34
APCP25054 SNORA44.1-201ENST00000517031 108 ntBASIC0.43□□□□□ -2.34
APCP25054 SNORA31.19-201ENST00000517079 126 ntBASIC0.43□□□□□ -2.34
APCP25054 AC107953.1-201ENST00000522216 297 ntBASIC0.43□□□□□ -2.34
APCP25054 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.43□□□□□ -2.34
APCP25054 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC0.43□□□□□ -2.34
APCP25054 AC025678.1-201ENST00000567861 338 ntBASIC0.43□□□□□ -2.34
APCP25054 AC005668.1-201ENST00000571142 476 ntBASIC0.43□□□□□ -2.34
APCP25054 AC091152.3-201ENST00000604227 325 ntBASIC0.43□□□□□ -2.34
APCP25054 AC092574.1-201ENST00000609771 420 ntBASIC0.43□□□□□ -2.34
APCP25054 AC136475.10-201ENST00000620253 385 ntBASIC0.43□□□□□ -2.34
APCP25054 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC0.43□□□□□ -2.34
APCP25054 AC017037.3-201ENST00000625016 472 ntBASIC0.43□□□□□ -2.34
APCP25054 AC132825.7-201ENST00000638744 335 ntBASIC0.43□□□□□ -2.34
APCP25054 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.43□□□□□ -2.34
APCP25054 AL391516.1-201ENST00000554380 2449 ntBASIC0.43□□□□□ -2.34
APCP25054 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
APCP25054 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
APCP25054 RNU4-73P-201ENST00000363164 141 ntBASIC0.43□□□□□ -2.34
APCP25054 RNU6-778P-201ENST00000363269 103 ntBASIC0.43□□□□□ -2.34
APCP25054 RNU6-792P-201ENST00000363490 107 ntBASIC0.43□□□□□ -2.34
APCP25054 RNU6-1164P-201ENST00000364428 107 ntBASIC0.43□□□□□ -2.34
APCP25054 Y_RNA.408-201ENST00000383987 102 ntBASIC0.43□□□□□ -2.34
APCP25054 USP9YP18-201ENST00000425912 695 ntBASIC0.43□□□□□ -2.34
APCP25054 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC0.43□□□□□ -2.34
APCP25054 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.43□□□□□ -2.34
APCP25054 AC013267.1-201ENST00000458227 267 ntBASIC0.43□□□□□ -2.34
APCP25054 RPL37P6-201ENST00000460682 294 ntBASIC0.43□□□□□ -2.34
APCP25054 HMGB1P35-201ENST00000503360 598 ntBASIC0.43□□□□□ -2.34
APCP25054 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC0.43□□□□□ -2.34
APCP25054 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC0.43□□□□□ -2.34
APCP25054 MTCYBP43-201ENST00000513621 740 ntBASIC0.43□□□□□ -2.34
APCP25054 RNU4-77P-201ENST00000516692 156 ntBASIC0.43□□□□□ -2.34
APCP25054 RNU6-965P-201ENST00000516721 96 ntBASIC0.43□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms