Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 RNU6-85P-201ENST00000605989 107 ntBASIC3.36□□□□□ -1.87
POLR2AP24928 AL589994.2-201ENST00000621124 579 ntBASIC3.36□□□□□ -1.87
POLR2AP24928 MIR8062-201ENST00000621515 85 ntBASIC3.36□□□□□ -1.87
POLR2AP24928 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.36□□□□□ -1.87
POLR2AP24928 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.36□□□□□ -1.87
POLR2AP24928 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
POLR2AP24928 AC138393.1-203ENST00000327086 343 ntBASIC3.36□□□□□ -1.87
POLR2AP24928 RNU6-874P-201ENST00000362390 105 ntBASIC3.36□□□□□ -1.87
POLR2AP24928 SNORD62.1-201ENST00000362541 86 ntBASIC3.36□□□□□ -1.87
POLR2AP24928 RNU6-395P-201ENST00000365662 106 ntBASIC3.36□□□□□ -1.87
POLR2AP24928 Y_RNA.512-201ENST00000384518 102 ntBASIC3.36□□□□□ -1.87
POLR2AP24928 Y_RNA.534-201ENST00000384599 112 ntBASIC3.36□□□□□ -1.87
POLR2AP24928 RPL32P35-201ENST00000415214 394 ntBASIC3.36□□□□□ -1.87
POLR2AP24928 RAC1P3-201ENST00000416129 580 ntBASIC3.36□□□□□ -1.87
POLR2AP24928 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.36□□□□□ -1.87
POLR2AP24928 CREM-226ENST00000469949 721 ntTSL 3 BASIC3.36□□□□□ -1.87
POLR2AP24928 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC3.36□□□□□ -1.87
POLR2AP24928 SUMO2P6-201ENST00000505273 288 ntBASIC3.36□□□□□ -1.87
POLR2AP24928 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.36□□□□□ -1.87
POLR2AP24928 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.36□□□□□ -1.87
POLR2AP24928 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.36□□□□□ -1.87
POLR2AP24928 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.36□□□□□ -1.87
POLR2AP24928 TUG1_2.1-201ENST00000614234 87 ntBASIC3.36□□□□□ -1.87
POLR2AP24928 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.36□□□□□ -1.87
POLR2AP24928 AC138627.2-201ENST00000624202 601 ntBASIC3.36□□□□□ -1.87
POLR2AP24928 NAA50-211ENST00000630058 177 ntTSL 5 BASIC3.36□□□□□ -1.87
POLR2AP24928 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.36□□□□□ -1.87
POLR2AP24928 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.35□□□□□ -1.87
POLR2AP24928 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.35□□□□□ -1.87
POLR2AP24928 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
POLR2AP24928 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
POLR2AP24928 ZNF299P-201ENST00000406845 1804 ntBASIC3.35□□□□□ -1.87
POLR2AP24928 U8.2-201ENST00000363156 134 ntBASIC3.35□□□□□ -1.87
POLR2AP24928 RNU4-50P-201ENST00000364361 141 ntBASIC3.35□□□□□ -1.87
POLR2AP24928 Z98941.1-201ENST00000407764 100 ntBASIC3.35□□□□□ -1.87
POLR2AP24928 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.35□□□□□ -1.87
POLR2AP24928 Z85995.1-201ENST00000415547 335 ntBASIC3.35□□□□□ -1.87
POLR2AP24928 ELOCP20-201ENST00000422460 345 ntBASIC3.35□□□□□ -1.87
POLR2AP24928 AC133134.1-201ENST00000466800 359 ntBASIC3.35□□□□□ -1.87
POLR2AP24928 RPS15AP34-201ENST00000487776 387 ntBASIC3.35□□□□□ -1.87
POLR2AP24928 SRIP1-201ENST00000489235 288 ntBASIC3.35□□□□□ -1.87
POLR2AP24928 RNU6-390P-201ENST00000516259 103 ntBASIC3.35□□□□□ -1.87
POLR2AP24928 RNA5SP148-201ENST00000516527 94 ntBASIC3.35□□□□□ -1.87
POLR2AP24928 RNU4-77P-201ENST00000516692 156 ntBASIC3.35□□□□□ -1.87
POLR2AP24928 AC091144.1-201ENST00000519573 138 ntBASIC3.35□□□□□ -1.87
POLR2AP24928 AC009163.5-201ENST00000575421 637 ntBASIC3.35□□□□□ -1.87
POLR2AP24928 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.35□□□□□ -1.87
POLR2AP24928 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.35□□□□□ -1.87
POLR2AP24928 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
POLR2AP24928 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.35□□□□□ -1.87
POLR2AP24928 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
POLR2AP24928 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
POLR2AP24928 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
POLR2AP24928 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
POLR2AP24928 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.34□□□□□ -1.87
POLR2AP24928 Y_RNA.44-201ENST00000362676 108 ntBASIC3.34□□□□□ -1.87
POLR2AP24928 RNU6-629P-201ENST00000384061 103 ntBASIC3.34□□□□□ -1.87
POLR2AP24928 MIR135A2-201ENST00000384854 100 ntBASIC3.34□□□□□ -1.87
POLR2AP24928 RNU6-817P-201ENST00000391083 104 ntBASIC3.34□□□□□ -1.87
POLR2AP24928 AC104332.1-201ENST00000440471 797 ntBASIC3.34□□□□□ -1.87
POLR2AP24928 CHEK2P4-201ENST00000450340 246 ntBASIC3.34□□□□□ -1.87
POLR2AP24928 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
POLR2AP24928 AC022493.1-201ENST00000492984 337 ntBASIC3.34□□□□□ -1.87
POLR2AP24928 GZMAP1-201ENST00000503054 631 ntBASIC3.34□□□□□ -1.87
POLR2AP24928 AC022493.2-201ENST00000506122 481 ntBASIC3.34□□□□□ -1.87
POLR2AP24928 AC025755.1-201ENST00000521306 278 ntBASIC3.34□□□□□ -1.87
POLR2AP24928 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.34□□□□□ -1.87
POLR2AP24928 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
POLR2AP24928 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
POLR2AP24928 RNU1-35P-201ENST00000362782 153 ntBASIC3.34□□□□□ -1.88
POLR2AP24928 Y_RNA.785-201ENST00000384290 109 ntBASIC3.34□□□□□ -1.88
POLR2AP24928 RNY3P4-201ENST00000384428 101 ntBASIC3.34□□□□□ -1.88
POLR2AP24928 RNU6-790P-201ENST00000384479 105 ntBASIC3.34□□□□□ -1.88
POLR2AP24928 MIR1252-201ENST00000408861 65 ntBASIC3.34□□□□□ -1.88
POLR2AP24928 AP000275.1-201ENST00000411943 390 ntBASIC3.34□□□□□ -1.88
POLR2AP24928 RPEP5-201ENST00000441137 268 ntBASIC3.34□□□□□ -1.88
POLR2AP24928 AC013470.1-201ENST00000453438 462 ntBASIC3.34□□□□□ -1.88
POLR2AP24928 RNU6-237P-201ENST00000515985 71 ntBASIC3.34□□□□□ -1.88
POLR2AP24928 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC3.34□□□□□ -1.88
POLR2AP24928 AC109446.1-201ENST00000566172 220 ntBASIC3.34□□□□□ -1.88
POLR2AP24928 MIR1273C-201ENST00000578669 77 ntBASIC3.34□□□□□ -1.88
POLR2AP24928 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
POLR2AP24928 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.88
POLR2AP24928 MIR412-201ENST00000362142 91 ntBASIC3.33□□□□□ -1.88
POLR2AP24928 RNU4-42P-201ENST00000364738 142 ntBASIC3.33□□□□□ -1.88
POLR2AP24928 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
POLR2AP24928 Y_RNA.458-201ENST00000384240 102 ntBASIC3.33□□□□□ -1.88
POLR2AP24928 SNORA51.11-201ENST00000384442 131 ntBASIC3.33□□□□□ -1.88
POLR2AP24928 RNU6-882P-201ENST00000391025 103 ntBASIC3.33□□□□□ -1.88
POLR2AP24928 RNA5SP425-201ENST00000410336 112 ntBASIC3.33□□□□□ -1.88
POLR2AP24928 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.33□□□□□ -1.88
POLR2AP24928 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3.33□□□□□ -1.88
POLR2AP24928 FTH1P6-201ENST00000430768 320 ntBASIC3.33□□□□□ -1.88
POLR2AP24928 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.33□□□□□ -1.88
POLR2AP24928 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.33□□□□□ -1.88
POLR2AP24928 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
POLR2AP24928 RNU6-953P-201ENST00000459154 107 ntBASIC3.33□□□□□ -1.88
POLR2AP24928 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.33□□□□□ -1.88
POLR2AP24928 AL442163.3-201ENST00000554110 156 ntBASIC3.33□□□□□ -1.88
POLR2AP24928 MED28P6-201ENST00000558776 231 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms