Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 AC090525.1-201ENST00000479116 478 ntBASIC2.94□□□□□ -1.94
TNFSF4P23510 RNU6-559P-201ENST00000516151 98 ntBASIC2.94□□□□□ -1.94
TNFSF4P23510 AC107934.2-201ENST00000518653 310 ntBASIC2.94□□□□□ -1.94
TNFSF4P23510 AC109329.2-201ENST00000519658 482 ntBASIC2.94□□□□□ -1.94
TNFSF4P23510 AC026333.2-201ENST00000542164 106 ntBASIC2.94□□□□□ -1.94
TNFSF4P23510 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
TNFSF4P23510 AC011494.1-201ENST00000596454 237 ntBASIC2.94□□□□□ -1.94
TNFSF4P23510 IGKV1OR2-6-201ENST00000603485 277 ntBASIC2.94□□□□□ -1.94
TNFSF4P23510 AC008121.3-201ENST00000618726 433 ntBASIC2.94□□□□□ -1.94
TNFSF4P23510 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC2.94□□□□□ -1.94
TNFSF4P23510 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
TNFSF4P23510 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
TNFSF4P23510 MTND5P9-201ENST00000503854 1755 ntBASIC2.94□□□□□ -1.94
TNFSF4P23510 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.94□□□□□ -1.94
TNFSF4P23510 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
TNFSF4P23510 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
TNFSF4P23510 MTND5P27-201ENST00000428871 1720 ntBASIC2.93□□□□□ -1.94
TNFSF4P23510 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
TNFSF4P23510 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
TNFSF4P23510 KPNA2P1-201ENST00000458289 1591 ntBASIC2.93□□□□□ -1.94
TNFSF4P23510 RNA5SP119-201ENST00000362715 117 ntBASIC2.93□□□□□ -1.94
TNFSF4P23510 RNA5SP240-201ENST00000365355 128 ntBASIC2.93□□□□□ -1.94
TNFSF4P23510 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
TNFSF4P23510 RNU6-1297P-201ENST00000384415 104 ntBASIC2.93□□□□□ -1.94
TNFSF4P23510 MIR29B2-201ENST00000385055 81 ntBASIC2.93□□□□□ -1.94
TNFSF4P23510 RNU2-63P-201ENST00000410792 194 ntBASIC2.93□□□□□ -1.94
TNFSF4P23510 RNU6-370P-201ENST00000411008 104 ntBASIC2.93□□□□□ -1.94
TNFSF4P23510 DBIP2-201ENST00000419076 262 ntBASIC2.93□□□□□ -1.94
TNFSF4P23510 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC2.93□□□□□ -1.94
TNFSF4P23510 YME1L1P1-201ENST00000429435 297 ntBASIC2.93□□□□□ -1.94
TNFSF4P23510 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC2.93□□□□□ -1.94
TNFSF4P23510 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.93□□□□□ -1.94
TNFSF4P23510 RBMY2UP-201ENST00000453474 324 ntBASIC2.93□□□□□ -1.94
TNFSF4P23510 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.93□□□□□ -1.94
TNFSF4P23510 AC025518.1-201ENST00000479856 347 ntBASIC2.93□□□□□ -1.94
TNFSF4P23510 CKS1BP2-201ENST00000497342 240 ntBASIC2.93□□□□□ -1.94
TNFSF4P23510 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.93□□□□□ -1.94
TNFSF4P23510 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.93□□□□□ -1.94
TNFSF4P23510 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC2.93□□□□□ -1.94
TNFSF4P23510 AL355375.2-201ENST00000574825 175 ntBASIC2.93□□□□□ -1.94
TNFSF4P23510 MIR3944-201ENST00000581277 108 ntBASIC2.93□□□□□ -1.94
TNFSF4P23510 AL713866.2-201ENST00000603579 219 ntBASIC2.93□□□□□ -1.94
TNFSF4P23510 AP000654.2-201ENST00000605633 586 ntBASIC2.93□□□□□ -1.94
TNFSF4P23510 AC009318.2-201ENST00000610917 651 ntBASIC2.93□□□□□ -1.94
TNFSF4P23510 AC012314.7-201ENST00000619693 93 ntBASIC2.93□□□□□ -1.94
TNFSF4P23510 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC2.93□□□□□ -1.94
TNFSF4P23510 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
TNFSF4P23510 AC017071.1-201ENST00000564407 2204 ntBASIC2.93□□□□□ -1.94
TNFSF4P23510 AC233981.2-201ENST00000611524 1614 ntBASIC2.93□□□□□ -1.94
TNFSF4P23510 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
TNFSF4P23510 RNU4-35P-201ENST00000362588 141 ntBASIC2.92□□□□□ -1.94
TNFSF4P23510 SNORD50.1-201ENST00000362987 71 ntBASIC2.92□□□□□ -1.94
TNFSF4P23510 RNU6-1059P-201ENST00000363752 98 ntBASIC2.92□□□□□ -1.94
TNFSF4P23510 RNU6-842P-201ENST00000384269 107 ntBASIC2.92□□□□□ -1.94
TNFSF4P23510 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
TNFSF4P23510 U3.19-201ENST00000390893 196 ntBASIC2.92□□□□□ -1.94
TNFSF4P23510 RNU4-14P-201ENST00000410858 122 ntBASIC2.92□□□□□ -1.94
TNFSF4P23510 AL590556.1-201ENST00000423231 483 ntBASIC2.92□□□□□ -1.94
TNFSF4P23510 AC236972.1-201ENST00000433225 199 ntBASIC2.92□□□□□ -1.94
TNFSF4P23510 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.92□□□□□ -1.94
TNFSF4P23510 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.92□□□□□ -1.94
TNFSF4P23510 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.92□□□□□ -1.94
TNFSF4P23510 AC079354.2-201ENST00000453523 154 ntBASIC2.92□□□□□ -1.94
TNFSF4P23510 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.92□□□□□ -1.94
TNFSF4P23510 RN7SL293P-201ENST00000481765 281 ntBASIC2.92□□□□□ -1.94
TNFSF4P23510 SLC25A15P5-201ENST00000508033 253 ntBASIC2.92□□□□□ -1.94
TNFSF4P23510 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.92□□□□□ -1.94
TNFSF4P23510 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.92□□□□□ -1.94
TNFSF4P23510 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC2.92□□□□□ -1.94
TNFSF4P23510 Y_RNA.670-201ENST00000516255 105 ntBASIC2.92□□□□□ -1.94
TNFSF4P23510 RNU4ATAC7P-201ENST00000516280 125 ntBASIC2.92□□□□□ -1.94
TNFSF4P23510 RNU6-307P-201ENST00000516743 106 ntBASIC2.92□□□□□ -1.94
TNFSF4P23510 SNORA31.16-201ENST00000516773 139 ntBASIC2.92□□□□□ -1.94
TNFSF4P23510 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.92□□□□□ -1.94
TNFSF4P23510 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC2.92□□□□□ -1.94
TNFSF4P23510 TGIF1P1-201ENST00000558095 802 ntBASIC2.92□□□□□ -1.94
TNFSF4P23510 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.92□□□□□ -1.94
TNFSF4P23510 MIR5690-201ENST00000583739 73 ntBASIC2.92□□□□□ -1.94
TNFSF4P23510 AC009229.3-201ENST00000608056 282 ntBASIC2.92□□□□□ -1.94
TNFSF4P23510 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.92□□□□□ -1.94
TNFSF4P23510 AC022149.2-201ENST00000621061 203 ntBASIC2.92□□□□□ -1.94
TNFSF4P23510 AL450472.1-202ENST00000637286 180 ntBASIC2.92□□□□□ -1.94
TNFSF4P23510 AC112487.2-201ENST00000637950 304 ntBASIC2.92□□□□□ -1.94
TNFSF4P23510 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
TNFSF4P23510 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.92□□□□□ -1.94
TNFSF4P23510 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.92□□□□□ -1.94
TNFSF4P23510 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC2.92□□□□□ -1.94
TNFSF4P23510 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
TNFSF4P23510 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
TNFSF4P23510 SNORA75.4-201ENST00000391278 119 ntBASIC2.91□□□□□ -1.94
TNFSF4P23510 RNA5SP492-201ENST00000411330 114 ntBASIC2.91□□□□□ -1.94
TNFSF4P23510 AC003685.2-201ENST00000422795 395 ntBASIC2.91□□□□□ -1.94
TNFSF4P23510 AC104389.3-201ENST00000445629 235 ntBASIC2.91□□□□□ -1.94
TNFSF4P23510 AL353752.1-201ENST00000454946 260 ntBASIC2.91□□□□□ -1.94
TNFSF4P23510 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.91□□□□□ -1.94
TNFSF4P23510 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.91□□□□□ -1.94
TNFSF4P23510 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.91□□□□□ -1.94
TNFSF4P23510 RAB11AP2-201ENST00000545905 639 ntBASIC2.91□□□□□ -1.94
TNFSF4P23510 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.91□□□□□ -1.94
TNFSF4P23510 AC023824.2-201ENST00000566185 400 ntBASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 132.9 ms