Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 Y_RNA.29-201ENST00000362570 113 ntBASIC3.29□□□□□ -1.88
NR4A1P22736 MIR215-201ENST00000384858 110 ntBASIC3.29□□□□□ -1.88
NR4A1P22736 MIR554-201ENST00000384874 96 ntBASIC3.29□□□□□ -1.88
NR4A1P22736 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
NR4A1P22736 MTHFD2P2-201ENST00000407725 247 ntBASIC3.29□□□□□ -1.88
NR4A1P22736 AL591419.1-201ENST00000427423 339 ntBASIC3.29□□□□□ -1.88
NR4A1P22736 AP000907.1-201ENST00000428428 510 ntBASIC3.29□□□□□ -1.88
NR4A1P22736 RPL21P40-201ENST00000428586 483 ntBASIC3.29□□□□□ -1.88
NR4A1P22736 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.29□□□□□ -1.88
NR4A1P22736 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.29□□□□□ -1.88
NR4A1P22736 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.29□□□□□ -1.88
NR4A1P22736 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.29□□□□□ -1.88
NR4A1P22736 RNU4-71P-201ENST00000516258 113 ntBASIC3.29□□□□□ -1.88
NR4A1P22736 MIR2276-201ENST00000516886 89 ntBASIC3.29□□□□□ -1.88
NR4A1P22736 AC090617.3-201ENST00000573670 475 ntBASIC3.29□□□□□ -1.88
NR4A1P22736 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.29□□□□□ -1.88
NR4A1P22736 MIR4782-201ENST00000577987 79 ntBASIC3.29□□□□□ -1.88
NR4A1P22736 AC087499.8-201ENST00000578406 226 ntBASIC3.29□□□□□ -1.88
NR4A1P22736 BX284668.6-201ENST00000606899 438 ntBASIC3.29□□□□□ -1.88
NR4A1P22736 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.29□□□□□ -1.88
NR4A1P22736 CENPF-206ENST00000614578 528 ntTSL 5 BASIC3.29□□□□□ -1.88
NR4A1P22736 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.29□□□□□ -1.88
NR4A1P22736 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.29□□□□□ -1.88
NR4A1P22736 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
NR4A1P22736 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
NR4A1P22736 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
NR4A1P22736 USP8P1-201ENST00000494673 3183 ntBASIC3.28□□□□□ -1.88
NR4A1P22736 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.28□□□□□ -1.88
NR4A1P22736 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.28□□□□□ -1.88
NR4A1P22736 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
NR4A1P22736 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.28□□□□□ -1.88
NR4A1P22736 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
NR4A1P22736 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.28□□□□□ -1.88
NR4A1P22736 RNU6-105P-201ENST00000363909 104 ntBASIC3.28□□□□□ -1.88
NR4A1P22736 RNU6-805P-201ENST00000365643 106 ntBASIC3.28□□□□□ -1.88
NR4A1P22736 MIR548M-201ENST00000408260 86 ntBASIC3.28□□□□□ -1.88
NR4A1P22736 U3.37-201ENST00000408528 213 ntBASIC3.28□□□□□ -1.88
NR4A1P22736 RNU6ATAC-201ENST00000408749 126 ntBASIC3.28□□□□□ -1.88
NR4A1P22736 AC092047.1-201ENST00000424997 240 ntBASIC3.28□□□□□ -1.88
NR4A1P22736 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.28□□□□□ -1.88
NR4A1P22736 HMGN2P21-201ENST00000447764 270 ntBASIC3.28□□□□□ -1.88
NR4A1P22736 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.28□□□□□ -1.88
NR4A1P22736 snoU13.30-201ENST00000458951 104 ntBASIC3.28□□□□□ -1.88
NR4A1P22736 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.28□□□□□ -1.88
NR4A1P22736 AL137100.2-201ENST00000555786 315 ntBASIC3.28□□□□□ -1.88
NR4A1P22736 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.28□□□□□ -1.88
NR4A1P22736 AC034105.4-201ENST00000568304 277 ntBASIC3.28□□□□□ -1.88
NR4A1P22736 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.28□□□□□ -1.88
NR4A1P22736 AC136932.1-201ENST00000574771 208 ntBASIC3.28□□□□□ -1.88
NR4A1P22736 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.28□□□□□ -1.88
NR4A1P22736 SNORA62.6-201ENST00000606322 83 ntBASIC3.28□□□□□ -1.88
NR4A1P22736 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.28□□□□□ -1.88
NR4A1P22736 U6.99-201ENST00000637524 83 ntBASIC3.28□□□□□ -1.88
NR4A1P22736 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
NR4A1P22736 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
NR4A1P22736 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
NR4A1P22736 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.89
NR4A1P22736 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.28□□□□□ -1.89
NR4A1P22736 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
NR4A1P22736 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
NR4A1P22736 AC233981.2-201ENST00000611524 1614 ntBASIC3.27□□□□□ -1.89
NR4A1P22736 RNU6-280P-201ENST00000364145 104 ntBASIC3.27□□□□□ -1.89
NR4A1P22736 SNORA73.2-201ENST00000364946 201 ntBASIC3.27□□□□□ -1.89
NR4A1P22736 Y_RNA.581-201ENST00000391017 97 ntBASIC3.27□□□□□ -1.89
NR4A1P22736 SNORD78.2-201ENST00000391076 69 ntBASIC3.27□□□□□ -1.89
NR4A1P22736 RNA5SP31-201ENST00000411144 127 ntBASIC3.27□□□□□ -1.89
NR4A1P22736 AL139247.1-201ENST00000422768 325 ntBASIC3.27□□□□□ -1.89
NR4A1P22736 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.27□□□□□ -1.89
NR4A1P22736 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC3.27□□□□□ -1.89
NR4A1P22736 AL139109.1-201ENST00000455491 297 ntBASIC3.27□□□□□ -1.89
NR4A1P22736 snoU109.2-201ENST00000459316 135 ntBASIC3.27□□□□□ -1.89
NR4A1P22736 AL133162.1-201ENST00000463228 453 ntBASIC3.27□□□□□ -1.89
NR4A1P22736 RN7SL542P-201ENST00000467147 294 ntBASIC3.27□□□□□ -1.89
NR4A1P22736 RPL31P13-201ENST00000484151 370 ntBASIC3.27□□□□□ -1.89
NR4A1P22736 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.27□□□□□ -1.89
NR4A1P22736 RNU6-1338P-201ENST00000516328 91 ntBASIC3.27□□□□□ -1.89
NR4A1P22736 RNU6-1012P-201ENST00000516606 109 ntBASIC3.27□□□□□ -1.89
NR4A1P22736 RNU6-703P-201ENST00000516946 107 ntBASIC3.27□□□□□ -1.89
NR4A1P22736 RNU1-45P-201ENST00000517191 141 ntBASIC3.27□□□□□ -1.89
NR4A1P22736 AC023632.4-201ENST00000517783 191 ntBASIC3.27□□□□□ -1.89
NR4A1P22736 AP004607.1-201ENST00000524456 203 ntBASIC3.27□□□□□ -1.89
NR4A1P22736 DEFB108E-201ENST00000524692 240 ntBASIC3.27□□□□□ -1.89
NR4A1P22736 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.27□□□□□ -1.89
NR4A1P22736 MIR5187-201ENST00000583479 76 ntBASIC3.27□□□□□ -1.89
NR4A1P22736 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.27□□□□□ -1.89
NR4A1P22736 AC024153.1-201ENST00000603103 365 ntBASIC3.27□□□□□ -1.89
NR4A1P22736 FTX_2.1-201ENST00000618816 94 ntBASIC3.27□□□□□ -1.89
NR4A1P22736 AC022149.2-201ENST00000621061 203 ntBASIC3.27□□□□□ -1.89
NR4A1P22736 AC091903.1-201ENST00000624322 454 ntBASIC3.27□□□□□ -1.89
NR4A1P22736 SCARNA4-201ENST00000629045 128 ntBASIC3.27□□□□□ -1.89
NR4A1P22736 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.27□□□□□ -1.89
NR4A1P22736 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.27□□□□□ -1.89
NR4A1P22736 AP001148.1-201ENST00000624124 2359 ntBASIC3.27□□□□□ -1.89
NR4A1P22736 AC068647.1-201ENST00000489539 2265 ntBASIC3.27□□□□□ -1.89
NR4A1P22736 AC058791.1-201ENST00000608412 3198 ntBASIC3.26□□□□□ -1.89
NR4A1P22736 AL161912.2-201ENST00000565707 3007 ntBASIC3.26□□□□□ -1.89
NR4A1P22736 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
NR4A1P22736 AC009541.1-201ENST00000438279 2662 ntBASIC3.26□□□□□ -1.89
NR4A1P22736 RNU1-75P-201ENST00000347264 129 ntBASIC3.26□□□□□ -1.89
NR4A1P22736 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 177.9 ms