Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 AC007671.2-201ENST00000637344 619 ntBASIC1.5□□□□□ -2.17
ERCC1P07992 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.5□□□□□ -2.17
ERCC1P07992 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
ERCC1P07992 MIR424-201ENST00000362227 98 ntBASIC1.49□□□□□ -2.17
ERCC1P07992 RNU6-500P-201ENST00000362349 107 ntBASIC1.49□□□□□ -2.17
ERCC1P07992 Y_RNA.22-201ENST00000362492 102 ntBASIC1.49□□□□□ -2.17
ERCC1P07992 Y_RNA.140-201ENST00000363474 103 ntBASIC1.49□□□□□ -2.17
ERCC1P07992 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.49□□□□□ -2.17
ERCC1P07992 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
ERCC1P07992 SNORA67.5-201ENST00000391036 107 ntBASIC1.49□□□□□ -2.17
ERCC1P07992 MIR1294-201ENST00000408503 142 ntBASIC1.49□□□□□ -2.17
ERCC1P07992 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.49□□□□□ -2.17
ERCC1P07992 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.49□□□□□ -2.17
ERCC1P07992 AC003989.2-201ENST00000440224 169 ntBASIC1.49□□□□□ -2.17
ERCC1P07992 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.49□□□□□ -2.17
ERCC1P07992 RNVU1-2-201ENST00000516326 135 ntBASIC1.49□□□□□ -2.17
ERCC1P07992 RNU6-685P-201ENST00000517088 95 ntBASIC1.49□□□□□ -2.17
ERCC1P07992 COPS8P3-201ENST00000526024 482 ntBASIC1.49□□□□□ -2.17
ERCC1P07992 AP002453.2-201ENST00000533503 320 ntBASIC1.49□□□□□ -2.17
ERCC1P07992 AL356057.1-201ENST00000533798 831 ntBASIC1.49□□□□□ -2.17
ERCC1P07992 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.49□□□□□ -2.17
ERCC1P07992 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.49□□□□□ -2.17
ERCC1P07992 ELOCP32-201ENST00000548625 324 ntBASIC1.49□□□□□ -2.17
ERCC1P07992 AC104581.2-201ENST00000572227 430 ntBASIC1.49□□□□□ -2.17
ERCC1P07992 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.49□□□□□ -2.17
ERCC1P07992 MIR3683-201ENST00000580847 82 ntBASIC1.49□□□□□ -2.17
ERCC1P07992 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.49□□□□□ -2.17
ERCC1P07992 AL451064.1-201ENST00000607718 471 ntBASIC1.49□□□□□ -2.17
ERCC1P07992 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.49□□□□□ -2.17
ERCC1P07992 RNU6-661P-201ENST00000362409 107 ntBASIC1.48□□□□□ -2.17
ERCC1P07992 RNU6-179P-201ENST00000363350 107 ntBASIC1.48□□□□□ -2.17
ERCC1P07992 RNU6-527P-201ENST00000363425 104 ntBASIC1.48□□□□□ -2.17
ERCC1P07992 RNA5SP493-201ENST00000364115 91 ntBASIC1.48□□□□□ -2.17
ERCC1P07992 RNY1P12-201ENST00000364251 105 ntBASIC1.48□□□□□ -2.17
ERCC1P07992 RNA5SP363-201ENST00000365072 115 ntBASIC1.48□□□□□ -2.17
ERCC1P07992 RNU6-338P-201ENST00000383888 105 ntBASIC1.48□□□□□ -2.17
ERCC1P07992 RNU6-1222P-201ENST00000384615 107 ntBASIC1.48□□□□□ -2.17
ERCC1P07992 MIR9-3-201ENST00000385084 90 ntBASIC1.48□□□□□ -2.17
ERCC1P07992 RPL23AP32-201ENST00000395315 459 ntBASIC1.48□□□□□ -2.17
ERCC1P07992 AL627390.1-201ENST00000396055 340 ntBASIC1.48□□□□□ -2.17
ERCC1P07992 AL357139.1-201ENST00000407792 426 ntBASIC1.48□□□□□ -2.17
ERCC1P07992 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.48□□□□□ -2.17
ERCC1P07992 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.48□□□□□ -2.17
ERCC1P07992 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC1.48□□□□□ -2.17
ERCC1P07992 HSFY7P-201ENST00000432672 318 ntBASIC1.48□□□□□ -2.17
ERCC1P07992 HSFY8P-201ENST00000437934 318 ntBASIC1.48□□□□□ -2.17
ERCC1P07992 HSFY5P-201ENST00000453726 309 ntBASIC1.48□□□□□ -2.17
ERCC1P07992 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.48□□□□□ -2.17
ERCC1P07992 RNU6-333P-201ENST00000459117 107 ntBASIC1.48□□□□□ -2.17
ERCC1P07992 BZW1P2-201ENST00000473537 826 ntBASIC1.48□□□□□ -2.17
ERCC1P07992 RNU6-250P-201ENST00000516958 103 ntBASIC1.48□□□□□ -2.17
ERCC1P07992 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.48□□□□□ -2.17
ERCC1P07992 AC115990.1-201ENST00000526957 301 ntBASIC1.48□□□□□ -2.17
ERCC1P07992 AP003461.1-201ENST00000528866 78 ntBASIC1.48□□□□□ -2.17
ERCC1P07992 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.48□□□□□ -2.17
ERCC1P07992 SNORD53B-201ENST00000577887 78 ntBASIC1.48□□□□□ -2.17
ERCC1P07992 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC1.48□□□□□ -2.17
ERCC1P07992 HMGN1P30-201ENST00000589286 268 ntBASIC1.48□□□□□ -2.17
ERCC1P07992 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.48□□□□□ -2.17
ERCC1P07992 AC027807.2-201ENST00000616099 408 ntBASIC1.48□□□□□ -2.17
ERCC1P07992 AC131159.1-201ENST00000621854 213 ntBASIC1.48□□□□□ -2.17
ERCC1P07992 AL359740.1-201ENST00000624340 592 ntBASIC1.48□□□□□ -2.17
ERCC1P07992 AC008993.2-201ENST00000631744 806 ntBASIC1.48□□□□□ -2.17
ERCC1P07992 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.48□□□□□ -2.17
ERCC1P07992 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.48□□□□□ -2.17
ERCC1P07992 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
ERCC1P07992 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.47□□□□□ -2.17
ERCC1P07992 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
ERCC1P07992 RNU1-17P-201ENST00000363022 152 ntBASIC1.47□□□□□ -2.17
ERCC1P07992 U8.3-201ENST00000363321 132 ntBASIC1.47□□□□□ -2.17
ERCC1P07992 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.47□□□□□ -2.17
ERCC1P07992 MIR544A-201ENST00000384855 91 ntBASIC1.47□□□□□ -2.17
ERCC1P07992 RNU2-8P-201ENST00000410727 190 ntBASIC1.47□□□□□ -2.17
ERCC1P07992 NCOR1P3-201ENST00000420479 303 ntBASIC1.47□□□□□ -2.17
ERCC1P07992 CALM2P2-201ENST00000428512 440 ntBASIC1.47□□□□□ -2.17
ERCC1P07992 AL645568.3-201ENST00000433683 316 ntBASIC1.47□□□□□ -2.17
ERCC1P07992 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC1.47□□□□□ -2.17
ERCC1P07992 HMGB1P18-201ENST00000438801 619 ntBASIC1.47□□□□□ -2.17
ERCC1P07992 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.47□□□□□ -2.17
ERCC1P07992 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.47□□□□□ -2.17
ERCC1P07992 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC1.47□□□□□ -2.17
ERCC1P07992 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.47□□□□□ -2.17
ERCC1P07992 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.47□□□□□ -2.17
ERCC1P07992 RNU5F-2P-201ENST00000516066 82 ntBASIC1.47□□□□□ -2.17
ERCC1P07992 Y_RNA.672-201ENST00000516289 104 ntBASIC1.47□□□□□ -2.17
ERCC1P07992 RNU6-970P-201ENST00000516312 107 ntBASIC1.47□□□□□ -2.17
ERCC1P07992 TRAV32-201ENST00000553993 340 ntBASIC1.47□□□□□ -2.17
ERCC1P07992 MIR3169-201ENST00000578032 83 ntBASIC1.47□□□□□ -2.17
ERCC1P07992 AC008751.2-201ENST00000597885 980 ntBASIC1.47□□□□□ -2.17
ERCC1P07992 AP000648.3-201ENST00000623539 4507 ntBASIC1.47□□□□□ -2.17
ERCC1P07992 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.46□□□□□ -2.17
ERCC1P07992 RNU5F-7P-201ENST00000363696 115 ntBASIC1.46□□□□□ -2.18
ERCC1P07992 RNU5E-5P-201ENST00000365379 116 ntBASIC1.46□□□□□ -2.18
ERCC1P07992 RNU6-584P-201ENST00000410350 95 ntBASIC1.46□□□□□ -2.18
ERCC1P07992 RNU6-607P-201ENST00000411283 108 ntBASIC1.46□□□□□ -2.18
ERCC1P07992 AC000111.3-201ENST00000433478 193 ntBASIC1.46□□□□□ -2.18
ERCC1P07992 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC1.46□□□□□ -2.18
ERCC1P07992 USP9YP12-201ENST00000450481 570 ntBASIC1.46□□□□□ -2.18
ERCC1P07992 RNU1-98P-201ENST00000458992 160 ntBASIC1.46□□□□□ -2.18
ERCC1P07992 MTND2P14-201ENST00000482139 351 ntBASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 180.6 ms