Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 AC079781.2-201ENST00000446424 169 ntBASIC1.87□□□□□ -2.11
RETP07949 AC079448.1-201ENST00000449377 373 ntBASIC1.87□□□□□ -2.11
RETP07949 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.87□□□□□ -2.11
RETP07949 AC117522.1-201ENST00000509821 380 ntBASIC1.87□□□□□ -2.11
RETP07949 RN7SKP298-201ENST00000515950 94 ntBASIC1.87□□□□□ -2.11
RETP07949 RNU6-250P-201ENST00000516958 103 ntBASIC1.87□□□□□ -2.11
RETP07949 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.87□□□□□ -2.11
RETP07949 MTCO2P4-201ENST00000517968 247 ntBASIC1.87□□□□□ -2.11
RETP07949 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC1.87□□□□□ -2.11
RETP07949 AP003072.2-201ENST00000527756 676 ntBASIC1.87□□□□□ -2.11
RETP07949 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.87□□□□□ -2.11
RETP07949 AC024909.2-201ENST00000553035 286 ntBASIC1.87□□□□□ -2.11
RETP07949 AC105245.1-201ENST00000581934 244 ntBASIC1.87□□□□□ -2.11
RETP07949 AC098848.2-201ENST00000588023 330 ntBASIC1.87□□□□□ -2.11
RETP07949 AC068790.2-201ENST00000602601 557 ntBASIC1.87□□□□□ -2.11
RETP07949 AL355297.2-201ENST00000604792 129 ntBASIC1.87□□□□□ -2.11
RETP07949 BX248123.2-201ENST00000606318 124 ntBASIC1.87□□□□□ -2.11
RETP07949 AC069294.1-201ENST00000608397 350 ntBASIC1.87□□□□□ -2.11
RETP07949 AC099842.1-201ENST00000619919 596 ntBASIC1.87□□□□□ -2.11
RETP07949 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.87□□□□□ -2.11
RETP07949 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.86□□□□□ -2.11
RETP07949 MTND5P30-201ENST00000452896 1731 ntBASIC1.86□□□□□ -2.11
RETP07949 AL359854.1-201ENST00000614203 1594 ntBASIC1.86□□□□□ -2.11
RETP07949 RNU6-1119P-201ENST00000384349 108 ntBASIC1.86□□□□□ -2.11
RETP07949 RNU1-57P-201ENST00000384491 166 ntBASIC1.86□□□□□ -2.11
RETP07949 RNA5SP489-201ENST00000410986 109 ntBASIC1.86□□□□□ -2.11
RETP07949 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC1.86□□□□□ -2.11
RETP07949 SNORD56-201ENST00000413522 71 ntBASIC1.86□□□□□ -2.11
RETP07949 RPS3AP44-201ENST00000425466 790 ntBASIC1.86□□□□□ -2.11
RETP07949 MTCO3P5-201ENST00000433620 714 ntBASIC1.86□□□□□ -2.11
RETP07949 GPR143P-201ENST00000434155 205 ntBASIC1.86□□□□□ -2.11
RETP07949 AL353689.1-201ENST00000438895 199 ntBASIC1.86□□□□□ -2.11
RETP07949 RPS15AP9-201ENST00000439856 381 ntBASIC1.86□□□□□ -2.11
RETP07949 AC003989.2-201ENST00000440224 169 ntBASIC1.86□□□□□ -2.11
RETP07949 MTCYBP1-201ENST00000454315 1119 ntBASIC1.86□□□□□ -2.11
RETP07949 TPT1P7-201ENST00000458300 517 ntBASIC1.86□□□□□ -2.11
RETP07949 snoU109.2-201ENST00000459316 135 ntBASIC1.86□□□□□ -2.11
RETP07949 AC112771.1-201ENST00000463581 102 ntBASIC1.86□□□□□ -2.11
RETP07949 AC107032.1-201ENST00000485945 480 ntBASIC1.86□□□□□ -2.11
RETP07949 AC109927.2-201ENST00000506416 303 ntBASIC1.86□□□□□ -2.11
RETP07949 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC1.86□□□□□ -2.11
RETP07949 AC107393.1-201ENST00000512403 346 ntBASIC1.86□□□□□ -2.11
RETP07949 RNU6-410P-201ENST00000517006 107 ntBASIC1.86□□□□□ -2.11
RETP07949 ACA59.2-201ENST00000517061 156 ntBASIC1.86□□□□□ -2.11
RETP07949 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.86□□□□□ -2.11
RETP07949 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.86□□□□□ -2.11
RETP07949 LINC00933-203ENST00000559812 219 ntBASIC1.86□□□□□ -2.11
RETP07949 AL391840.1-201ENST00000571144 367 ntBASIC1.86□□□□□ -2.11
RETP07949 DEFB131E-202ENST00000602581 683 ntBASIC1.86□□□□□ -2.11
RETP07949 AC073648.5-201ENST00000603502 305 ntBASIC1.86□□□□□ -2.11
RETP07949 AL121992.2-201ENST00000606262 256 ntBASIC1.86□□□□□ -2.11
RETP07949 AC126118.1-201ENST00000607744 628 ntBASIC1.86□□□□□ -2.11
RETP07949 AL512598.1-201ENST00000610158 273 ntBASIC1.86□□□□□ -2.11
RETP07949 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.86□□□□□ -2.11
RETP07949 AC092656.1-203ENST00000624134 423 ntBASIC1.86□□□□□ -2.11
RETP07949 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.86□□□□□ -2.11
RETP07949 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
RETP07949 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
RETP07949 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.85□□□□□ -2.11
RETP07949 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.85□□□□□ -2.11
RETP07949 SNORD3E-201ENST00000362899 217 ntBASIC1.85□□□□□ -2.11
RETP07949 RNU6-181P-201ENST00000363225 107 ntBASIC1.85□□□□□ -2.11
RETP07949 RNU6-1097P-201ENST00000363586 107 ntBASIC1.85□□□□□ -2.11
RETP07949 RNU6-282P-201ENST00000365357 103 ntBASIC1.85□□□□□ -2.11
RETP07949 RNU6-108P-201ENST00000365558 107 ntBASIC1.85□□□□□ -2.11
RETP07949 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.85□□□□□ -2.11
RETP07949 SNORA24.1-201ENST00000384401 135 ntBASIC1.85□□□□□ -2.11
RETP07949 AL663109.1-201ENST00000411498 844 ntBASIC1.85□□□□□ -2.11
RETP07949 USP9YP6-201ENST00000413550 854 ntBASIC1.85□□□□□ -2.11
RETP07949 AC016831.2-201ENST00000417179 352 ntBASIC1.85□□□□□ -2.11
RETP07949 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.85□□□□□ -2.11
RETP07949 AC016907.1-201ENST00000419483 435 ntBASIC1.85□□□□□ -2.11
RETP07949 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC1.85□□□□□ -2.11
RETP07949 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.85□□□□□ -2.11
RETP07949 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC1.85□□□□□ -2.11
RETP07949 AL358934.1-201ENST00000432346 324 ntBASIC1.85□□□□□ -2.11
RETP07949 MTATP6P16-201ENST00000434543 526 ntBASIC1.85□□□□□ -2.11
RETP07949 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.85□□□□□ -2.11
RETP07949 C1DP4-201ENST00000455429 424 ntBASIC1.85□□□□□ -2.11
RETP07949 OARD1-209ENST00000471367 401 ntTSL 2 BASIC1.85□□□□□ -2.11
RETP07949 AC023194.1-201ENST00000493084 308 ntBASIC1.85□□□□□ -2.11
RETP07949 AC116562.3-201ENST00000506136 177 ntBASIC1.85□□□□□ -2.11
RETP07949 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC1.85□□□□□ -2.11
RETP07949 AC008526.1-201ENST00000509149 338 ntBASIC1.85□□□□□ -2.11
RETP07949 MTND3P5-201ENST00000512798 333 ntBASIC1.85□□□□□ -2.11
RETP07949 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.85□□□□□ -2.11
RETP07949 RNU6-445P-201ENST00000516949 107 ntBASIC1.85□□□□□ -2.11
RETP07949 RNU6-1315P-201ENST00000517187 99 ntBASIC1.85□□□□□ -2.11
RETP07949 AC068587.5-201ENST00000528506 175 ntBASIC1.85□□□□□ -2.11
RETP07949 AL133241.1-201ENST00000556832 487 ntBASIC1.85□□□□□ -2.11
RETP07949 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC1.85□□□□□ -2.11
RETP07949 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
RETP07949 MIR6134-201ENST00000617606 109 ntBASIC1.85□□□□□ -2.11
RETP07949 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
RETP07949 CDC27P3-201ENST00000635418 1910 ntBASIC1.85□□□□□ -2.11
RETP07949 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.85□□□□□ -2.11
RETP07949 RNU6-486P-201ENST00000363116 107 ntBASIC1.84□□□□□ -2.11
RETP07949 RNU4-24P-201ENST00000364565 139 ntBASIC1.84□□□□□ -2.11
RETP07949 RNU6-234P-201ENST00000365229 104 ntBASIC1.84□□□□□ -2.11
RETP07949 RNU6-1042P-201ENST00000384204 107 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms