Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.24□□□□□ -2.37
HMGN1P05114 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC0.24□□□□□ -2.37
HMGN1P05114 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC0.24□□□□□ -2.37
HMGN1P05114 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC0.24□□□□□ -2.37
HMGN1P05114 MTCYBP1-201ENST00000454315 1119 ntBASIC0.24□□□□□ -2.37
HMGN1P05114 snoU13.30-201ENST00000458951 104 ntBASIC0.24□□□□□ -2.37
HMGN1P05114 RNA5SP490-201ENST00000517141 136 ntBASIC0.24□□□□□ -2.37
HMGN1P05114 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC0.24□□□□□ -2.37
HMGN1P05114 AC006518.2-201ENST00000542513 940 ntBASIC0.24□□□□□ -2.37
HMGN1P05114 MIR5093-201ENST00000583199 100 ntBASIC0.24□□□□□ -2.37
HMGN1P05114 AC016727.2-201ENST00000603988 621 ntBASIC0.24□□□□□ -2.37
HMGN1P05114 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.24□□□□□ -2.37
HMGN1P05114 AC243829.6-201ENST00000612652 106 ntBASIC0.24□□□□□ -2.37
HMGN1P05114 SNRPEP3-201ENST00000338402 276 ntBASIC0.23□□□□□ -2.37
HMGN1P05114 snoU2_19.1-201ENST00000362361 80 ntBASIC0.23□□□□□ -2.37
HMGN1P05114 RNU6-575P-201ENST00000411326 105 ntBASIC0.23□□□□□ -2.37
HMGN1P05114 AL591212.2-201ENST00000433923 257 ntBASIC0.23□□□□□ -2.37
HMGN1P05114 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC0.23□□□□□ -2.37
HMGN1P05114 NEFMP1-201ENST00000443423 1006 ntBASIC0.23□□□□□ -2.37
HMGN1P05114 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC0.23□□□□□ -2.37
HMGN1P05114 AL353752.1-201ENST00000454946 260 ntBASIC0.23□□□□□ -2.37
HMGN1P05114 AC114981.1-201ENST00000503897 678 ntBASIC0.23□□□□□ -2.37
HMGN1P05114 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC0.23□□□□□ -2.37
HMGN1P05114 MIR5000-201ENST00000577717 103 ntBASIC0.23□□□□□ -2.37
HMGN1P05114 AC078795.2-201ENST00000602835 1252 ntBASIC0.23□□□□□ -2.37
HMGN1P05114 MIR6504-201ENST00000613520 61 ntBASIC0.23□□□□□ -2.37
HMGN1P05114 MIR6788-201ENST00000618842 66 ntBASIC0.23□□□□□ -2.37
HMGN1P05114 AC009509.4-201ENST00000619202 509 ntBASIC0.23□□□□□ -2.37
HMGN1P05114 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC0.23□□□□□ -2.37
HMGN1P05114 ZNF736P10Y-201ENST00000403990 1110 ntBASIC0.22□□□□□ -2.37
HMGN1P05114 MIR548J-201ENST00000408833 112 ntBASIC0.22□□□□□ -2.37
HMGN1P05114 RAC1P6-201ENST00000423911 575 ntBASIC0.22□□□□□ -2.37
HMGN1P05114 snoU13.14-201ENST00000459372 104 ntBASIC0.22□□□□□ -2.37
HMGN1P05114 AC067942.3-201ENST00000512025 362 ntBASIC0.22□□□□□ -2.37
HMGN1P05114 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC0.22□□□□□ -2.37
HMGN1P05114 AC243829.3-201ENST00000622177 108 ntBASIC0.22□□□□□ -2.37
HMGN1P05114 AC068787.1-201ENST00000623908 691 ntBASIC0.22□□□□□ -2.37
HMGN1P05114 ANKRD36BP1-202ENST00000604892 1417 ntBASIC0.21□□□□□ -2.38
HMGN1P05114 MTND4P14-201ENST00000435799 1354 ntBASIC0.21□□□□□ -2.38
HMGN1P05114 RNU6-212P-201ENST00000362642 104 ntBASIC0.21□□□□□ -2.38
HMGN1P05114 SNORA63D-201ENST00000364359 132 ntBASIC0.21□□□□□ -2.38
HMGN1P05114 RNU6-1019P-201ENST00000364424 107 ntBASIC0.21□□□□□ -2.38
HMGN1P05114 Y_RNA.332-201ENST00000365271 113 ntBASIC0.21□□□□□ -2.38
HMGN1P05114 AL590556.1-201ENST00000423231 483 ntBASIC0.21□□□□□ -2.38
HMGN1P05114 RAB28P5-201ENST00000427490 651 ntBASIC0.21□□□□□ -2.38
HMGN1P05114 RPS15AP10-201ENST00000432472 382 ntBASIC0.21□□□□□ -2.38
HMGN1P05114 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC0.21□□□□□ -2.38
HMGN1P05114 GTF2IP12-201ENST00000456547 356 ntBASIC0.21□□□□□ -2.38
HMGN1P05114 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC0.21□□□□□ -2.38
HMGN1P05114 RNU6-496P-201ENST00000516145 99 ntBASIC0.21□□□□□ -2.38
HMGN1P05114 AC103833.1-201ENST00000517442 172 ntBASIC0.21□□□□□ -2.38
HMGN1P05114 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC0.21□□□□□ -2.38
HMGN1P05114 AP001189.2-201ENST00000527320 189 ntBASIC0.21□□□□□ -2.38
HMGN1P05114 AL391001.1-201ENST00000602747 715 ntBASIC0.21□□□□□ -2.38
HMGN1P05114 AC105148.1-201ENST00000604961 409 ntBASIC0.21□□□□□ -2.38
HMGN1P05114 AC063943.3-201ENST00000615562 356 ntBASIC0.21□□□□□ -2.38
HMGN1P05114 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC0.21□□□□□ -2.38
HMGN1P05114 AC092656.1-203ENST00000624134 423 ntBASIC0.21□□□□□ -2.38
HMGN1P05114 Y_RNA.40-201ENST00000362645 93 ntBASIC0.2□□□□□ -2.38
HMGN1P05114 Y_RNA.191-201ENST00000363972 113 ntBASIC0.2□□□□□ -2.38
HMGN1P05114 RNU6-1207P-201ENST00000384343 107 ntBASIC0.2□□□□□ -2.38
HMGN1P05114 RNU6-348P-201ENST00000384386 107 ntBASIC0.2□□□□□ -2.38
HMGN1P05114 RNU6-1176P-201ENST00000390955 107 ntBASIC0.2□□□□□ -2.38
HMGN1P05114 RAP1BP3-201ENST00000407180 549 ntBASIC0.2□□□□□ -2.38
HMGN1P05114 RNU2-23P-201ENST00000410545 195 ntBASIC0.2□□□□□ -2.38
HMGN1P05114 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC0.2□□□□□ -2.38
HMGN1P05114 COX6CP10-201ENST00000416832 224 ntBASIC0.2□□□□□ -2.38
HMGN1P05114 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC0.2□□□□□ -2.38
HMGN1P05114 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC0.2□□□□□ -2.38
HMGN1P05114 TPRKBP1-201ENST00000456243 481 ntBASIC0.2□□□□□ -2.38
HMGN1P05114 MTND1P3-201ENST00000484956 952 ntBASIC0.2□□□□□ -2.38
HMGN1P05114 SNORD79.1-201ENST00000516069 84 ntBASIC0.2□□□□□ -2.38
HMGN1P05114 RNU6-143P-201ENST00000516942 93 ntBASIC0.2□□□□□ -2.38
HMGN1P05114 RNU6-1261P-201ENST00000517194 104 ntBASIC0.2□□□□□ -2.38
HMGN1P05114 AC126365.2-201ENST00000580630 379 ntBASIC0.2□□□□□ -2.38
HMGN1P05114 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.2□□□□□ -2.38
HMGN1P05114 AL359740.1-201ENST00000624340 592 ntBASIC0.2□□□□□ -2.38
HMGN1P05114 RNA5SP111-201ENST00000411386 101 ntBASIC0.19□□□□□ -2.38
HMGN1P05114 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC0.19□□□□□ -2.38
HMGN1P05114 MTCO2P12-201ENST00000427426 682 ntBASIC0.19□□□□□ -2.38
HMGN1P05114 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC0.19□□□□□ -2.38
HMGN1P05114 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC0.19□□□□□ -2.38
HMGN1P05114 RNU7-140P-201ENST00000459546 60 ntBASIC0.19□□□□□ -2.38
HMGN1P05114 MTCO3P42-201ENST00000509488 518 ntBASIC0.19□□□□□ -2.38
HMGN1P05114 MTCO3P39-201ENST00000514812 518 ntBASIC0.19□□□□□ -2.38
HMGN1P05114 SNORA31.19-201ENST00000517079 126 ntBASIC0.19□□□□□ -2.38
HMGN1P05114 AC009902.1-201ENST00000519351 183 ntBASIC0.19□□□□□ -2.38
HMGN1P05114 AC023538.1-201ENST00000534576 736 ntBASIC0.19□□□□□ -2.38
HMGN1P05114 MIR4298-201ENST00000584380 73 ntBASIC0.19□□□□□ -2.38
HMGN1P05114 AL451064.1-201ENST00000607718 471 ntBASIC0.19□□□□□ -2.38
HMGN1P05114 AL357080.1-201ENST00000617394 239 ntBASIC0.19□□□□□ -2.38
HMGN1P05114 MIR6513-201ENST00000621188 64 ntBASIC0.19□□□□□ -2.38
HMGN1P05114 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC0.19□□□□□ -2.38
HMGN1P05114 VTRNA1-3-201ENST00000365645 89 ntBASIC0.18□□□□□ -2.38
HMGN1P05114 RNU6-1237P-201ENST00000384777 107 ntBASIC0.18□□□□□ -2.38
HMGN1P05114 RPL21P24-201ENST00000413752 448 ntBASIC0.18□□□□□ -2.38
HMGN1P05114 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.18□□□□□ -2.38
HMGN1P05114 AC069257.2-201ENST00000441819 155 ntBASIC0.18□□□□□ -2.38
HMGN1P05114 FTH1P25-201ENST00000447665 469 ntBASIC0.18□□□□□ -2.38
HMGN1P05114 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC0.18□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms