Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.15□□□□□ -1.75
PDGFAP04085 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC4.15□□□□□ -1.75
PDGFAP04085 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.15□□□□□ -1.75
PDGFAP04085 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC4.15□□□□□ -1.75
PDGFAP04085 IGKV2-38-201ENST00000517443 247 ntBASIC4.15□□□□□ -1.75
PDGFAP04085 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
PDGFAP04085 AP000867.2-201ENST00000532468 320 ntBASIC4.15□□□□□ -1.75
PDGFAP04085 AC006130.2-201ENST00000586202 326 ntBASIC4.15□□□□□ -1.75
PDGFAP04085 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC4.15□□□□□ -1.75
PDGFAP04085 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC4.15□□□□□ -1.75
PDGFAP04085 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC4.15□□□□□ -1.75
PDGFAP04085 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.15□□□□□ -1.75
PDGFAP04085 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
PDGFAP04085 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
PDGFAP04085 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
PDGFAP04085 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
PDGFAP04085 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.15□□□□□ -1.75
PDGFAP04085 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
PDGFAP04085 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
PDGFAP04085 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
PDGFAP04085 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
PDGFAP04085 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.14□□□□□ -1.75
PDGFAP04085 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
PDGFAP04085 AC125257.1-201ENST00000560400 2930 ntBASIC4.14□□□□□ -1.75
PDGFAP04085 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.14□□□□□ -1.75
PDGFAP04085 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PDGFAP04085 SPRR2C-201ENST00000290702 219 ntBASIC4.14□□□□□ -1.75
PDGFAP04085 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
PDGFAP04085 MIR372-201ENST00000362225 67 ntBASIC4.14□□□□□ -1.75
PDGFAP04085 RNU6-1010P-201ENST00000362757 107 ntBASIC4.14□□□□□ -1.75
PDGFAP04085 RNU4-80P-201ENST00000363200 141 ntBASIC4.14□□□□□ -1.75
PDGFAP04085 Y_RNA.262-201ENST00000364641 102 ntBASIC4.14□□□□□ -1.75
PDGFAP04085 RNU6-923P-201ENST00000364753 107 ntBASIC4.14□□□□□ -1.75
PDGFAP04085 Y_RNA.435-201ENST00000384095 112 ntBASIC4.14□□□□□ -1.75
PDGFAP04085 RNU6-198P-201ENST00000384258 104 ntBASIC4.14□□□□□ -1.75
PDGFAP04085 MIR3074-201ENST00000384885 81 ntBASIC4.14□□□□□ -1.75
PDGFAP04085 MIR147B-201ENST00000390185 80 ntBASIC4.14□□□□□ -1.75
PDGFAP04085 AL133475.1-201ENST00000404414 305 ntBASIC4.14□□□□□ -1.75
PDGFAP04085 RNA5SP475-201ENST00000410568 110 ntBASIC4.14□□□□□ -1.75
PDGFAP04085 AC009237.7-201ENST00000447357 229 ntBASIC4.14□□□□□ -1.75
PDGFAP04085 AC010099.1-201ENST00000455434 375 ntBASIC4.14□□□□□ -1.75
PDGFAP04085 AC006517.1-201ENST00000480485 328 ntBASIC4.14□□□□□ -1.75
PDGFAP04085 AC103975.1-201ENST00000482506 483 ntBASIC4.14□□□□□ -1.75
PDGFAP04085 RNU6-191P-201ENST00000516295 94 ntBASIC4.14□□□□□ -1.75
PDGFAP04085 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.14□□□□□ -1.75
PDGFAP04085 AL138880.2-201ENST00000616214 239 ntBASIC4.14□□□□□ -1.75
PDGFAP04085 AC092628.2-201ENST00000622492 339 ntBASIC4.14□□□□□ -1.75
PDGFAP04085 MIR3674-201ENST00000636576 68 ntBASIC4.14□□□□□ -1.75
PDGFAP04085 MIR492-201ENST00000638676 116 ntBASIC4.14□□□□□ -1.75
PDGFAP04085 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PDGFAP04085 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PDGFAP04085 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC4.14□□□□□ -1.75
PDGFAP04085 AC008725.1-201ENST00000605123 2263 ntBASIC4.14□□□□□ -1.75
PDGFAP04085 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
PDGFAP04085 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PDGFAP04085 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
PDGFAP04085 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.13□□□□□ -1.75
PDGFAP04085 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.13□□□□□ -1.75
PDGFAP04085 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.13□□□□□ -1.75
PDGFAP04085 SNORD114-19-201ENST00000363072 75 ntBASIC4.13□□□□□ -1.75
PDGFAP04085 RNU6-727P-201ENST00000363592 107 ntBASIC4.13□□□□□ -1.75
PDGFAP04085 Y_RNA.308-201ENST00000365043 101 ntBASIC4.13□□□□□ -1.75
PDGFAP04085 SNORA40.19-201ENST00000390846 128 ntBASIC4.13□□□□□ -1.75
PDGFAP04085 RNA5SP171-201ENST00000391071 115 ntBASIC4.13□□□□□ -1.75
PDGFAP04085 RNU2-54P-201ENST00000410299 190 ntBASIC4.13□□□□□ -1.75
PDGFAP04085 RNU2-49P-201ENST00000410666 184 ntBASIC4.13□□□□□ -1.75
PDGFAP04085 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC4.13□□□□□ -1.75
PDGFAP04085 AC024067.1-201ENST00000426199 223 ntBASIC4.13□□□□□ -1.75
PDGFAP04085 AC091021.1-201ENST00000468051 388 ntBASIC4.13□□□□□ -1.75
PDGFAP04085 AC108022.1-201ENST00000493466 478 ntBASIC4.13□□□□□ -1.75
PDGFAP04085 PARP4P3-201ENST00000510265 317 ntBASIC4.13□□□□□ -1.75
PDGFAP04085 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.13□□□□□ -1.75
PDGFAP04085 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC4.13□□□□□ -1.75
PDGFAP04085 AC027176.1-201ENST00000560204 514 ntBASIC4.13□□□□□ -1.75
PDGFAP04085 AC021753.1-201ENST00000635724 168 ntBASIC4.13□□□□□ -1.75
PDGFAP04085 AC132825.6-201ENST00000638861 357 ntBASIC4.13□□□□□ -1.75
PDGFAP04085 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PDGFAP04085 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
PDGFAP04085 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PDGFAP04085 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.12□□□□□ -1.75
PDGFAP04085 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
PDGFAP04085 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.12□□□□□ -1.75
PDGFAP04085 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
PDGFAP04085 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC4.12□□□□□ -1.75
PDGFAP04085 MIR383-201ENST00000362257 73 ntBASIC4.12□□□□□ -1.75
PDGFAP04085 Y_RNA.304-201ENST00000365011 112 ntBASIC4.12□□□□□ -1.75
PDGFAP04085 MIR513A2-201ENST00000385249 127 ntBASIC4.12□□□□□ -1.75
PDGFAP04085 SDHCP2-201ENST00000398565 501 ntBASIC4.12□□□□□ -1.75
PDGFAP04085 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC4.12□□□□□ -1.75
PDGFAP04085 AC096649.2-201ENST00000416186 393 ntBASIC4.12□□□□□ -1.75
PDGFAP04085 TMSB4XP3-201ENST00000445144 114 ntBASIC4.12□□□□□ -1.75
PDGFAP04085 snoU13.14-201ENST00000459372 104 ntBASIC4.12□□□□□ -1.75
PDGFAP04085 RNU6-966P-201ENST00000516479 104 ntBASIC4.12□□□□□ -1.75
PDGFAP04085 AC100770.1-201ENST00000532310 322 ntBASIC4.12□□□□□ -1.75
PDGFAP04085 AC012493.2-201ENST00000595083 291 ntBASIC4.12□□□□□ -1.75
PDGFAP04085 AC006380.1-201ENST00000603598 186 ntBASIC4.12□□□□□ -1.75
PDGFAP04085 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC4.12□□□□□ -1.75
PDGFAP04085 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PDGFAP04085 AC010889.1-201ENST00000566193 2666 ntBASIC4.12□□□□□ -1.75
PDGFAP04085 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 595.8 ms