Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 AC005951.2-201ENST00000576282 495 ntBASIC0.08□□□□□ -2.4
SPTA1P02549 AP000860.1-201ENST00000605250 559 ntBASIC0.08□□□□□ -2.4
SPTA1P02549 AC024257.5-201ENST00000612739 531 ntBASIC0.08□□□□□ -2.4
SPTA1P02549 AC040896.1-201ENST00000613819 479 ntBASIC0.08□□□□□ -2.4
SPTA1P02549 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC0.08□□□□□ -2.4
SPTA1P02549 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC0.08□□□□□ -2.4
SPTA1P02549 U4.2-201ENST00000618561 85 ntBASIC0.08□□□□□ -2.4
SPTA1P02549 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.08□□□□□ -2.4
SPTA1P02549 OR5T3-201ENST00000303059 1023 ntBASIC0.08□□□□□ -2.4
SPTA1P02549 SNORD114-6-201ENST00000364393 72 ntBASIC0.08□□□□□ -2.4
SPTA1P02549 RNA5SP219-201ENST00000390940 113 ntBASIC0.08□□□□□ -2.4
SPTA1P02549 SNORA40C-201ENST00000391285 128 ntBASIC0.08□□□□□ -2.4
SPTA1P02549 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.08□□□□□ -2.4
SPTA1P02549 PTGES3P1-201ENST00000439531 483 ntBASIC0.08□□□□□ -2.4
SPTA1P02549 AL096829.2-201ENST00000446582 742 ntBASIC0.08□□□□□ -2.4
SPTA1P02549 AC084024.2-201ENST00000503480 791 ntBASIC0.08□□□□□ -2.4
SPTA1P02549 COX7A2P2-201ENST00000505291 250 ntBASIC0.08□□□□□ -2.4
SPTA1P02549 AC022483.1-201ENST00000514020 567 ntBASIC0.08□□□□□ -2.4
SPTA1P02549 SNORA31.4-201ENST00000516049 129 ntBASIC0.08□□□□□ -2.4
SPTA1P02549 RNA5SP503-201ENST00000517047 117 ntBASIC0.08□□□□□ -2.4
SPTA1P02549 ZNF705CP-201ENST00000530515 889 ntBASIC0.08□□□□□ -2.4
SPTA1P02549 AL121579.1-201ENST00000555129 305 ntBASIC0.08□□□□□ -2.4
SPTA1P02549 ROCK1P1-201ENST00000573767 549 ntBASIC0.08□□□□□ -2.4
SPTA1P02549 AL671309.1-201ENST00000603750 544 ntBASIC0.08□□□□□ -2.4
SPTA1P02549 AC017037.3-201ENST00000625016 472 ntBASIC0.08□□□□□ -2.4
SPTA1P02549 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.07□□□□□ -2.4
SPTA1P02549 RNU6-505P-201ENST00000384427 107 ntBASIC0.07□□□□□ -2.4
SPTA1P02549 EIF1P1-201ENST00000421436 341 ntBASIC0.07□□□□□ -2.4
SPTA1P02549 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC0.07□□□□□ -2.4
SPTA1P02549 AC139712.2-201ENST00000424302 339 ntBASIC0.07□□□□□ -2.4
SPTA1P02549 AC092423.1-201ENST00000430165 186 ntBASIC0.07□□□□□ -2.4
SPTA1P02549 GPM6BP2-201ENST00000432046 144 ntBASIC0.07□□□□□ -2.4
SPTA1P02549 GPM6BP1-201ENST00000446387 144 ntBASIC0.07□□□□□ -2.4
SPTA1P02549 AL049830.1-201ENST00000468034 425 ntBASIC0.07□□□□□ -2.4
SPTA1P02549 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC0.07□□□□□ -2.4
SPTA1P02549 RN7SKP258-201ENST00000517151 304 ntBASIC0.07□□□□□ -2.4
SPTA1P02549 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC0.07□□□□□ -2.4
SPTA1P02549 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC0.07□□□□□ -2.4
SPTA1P02549 MIR378F-201ENST00000578143 78 ntBASIC0.07□□□□□ -2.4
SPTA1P02549 U6.101-201ENST00000637707 76 ntBASIC0.07□□□□□ -2.4
SPTA1P02549 SNORD114-28-201ENST00000363610 72 ntBASIC0.07□□□□□ -2.4
SPTA1P02549 RNU6-439P-201ENST00000384188 106 ntBASIC0.07□□□□□ -2.4
SPTA1P02549 Y_RNA.548-201ENST00000384656 105 ntBASIC0.07□□□□□ -2.4
SPTA1P02549 MIR518A1-201ENST00000385068 85 ntBASIC0.07□□□□□ -2.4
SPTA1P02549 RNU2-28P-201ENST00000410457 189 ntBASIC0.07□□□□□ -2.4
SPTA1P02549 RPL22P18-201ENST00000417197 377 ntBASIC0.07□□□□□ -2.4
SPTA1P02549 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC0.07□□□□□ -2.4
SPTA1P02549 SNORD57-201ENST00000448188 72 ntBASIC0.07□□□□□ -2.4
SPTA1P02549 PAXBP1P1-201ENST00000449315 447 ntBASIC0.07□□□□□ -2.4
SPTA1P02549 AC013828.1-201ENST00000481845 158 ntBASIC0.07□□□□□ -2.4
SPTA1P02549 BET1P1-201ENST00000482276 359 ntBASIC0.07□□□□□ -2.4
SPTA1P02549 AC011005.2-201ENST00000487324 359 ntBASIC0.07□□□□□ -2.4
SPTA1P02549 TRBVA-201ENST00000498804 316 ntBASIC0.07□□□□□ -2.4
SPTA1P02549 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC0.07□□□□□ -2.4
SPTA1P02549 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.07□□□□□ -2.4
SPTA1P02549 AC026371.1-201ENST00000551867 419 ntBASIC0.07□□□□□ -2.4
SPTA1P02549 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC0.07□□□□□ -2.4
SPTA1P02549 AL513534.2-201ENST00000603836 250 ntBASIC0.07□□□□□ -2.4
SPTA1P02549 AC104465.1-201ENST00000611365 139 ntBASIC0.07□□□□□ -2.4
SPTA1P02549 MIR6134-201ENST00000617606 109 ntBASIC0.07□□□□□ -2.4
SPTA1P02549 AC024581.2-201ENST00000619986 252 ntBASIC0.07□□□□□ -2.4
SPTA1P02549 U6.107-201ENST00000637108 79 ntBASIC0.07□□□□□ -2.4
SPTA1P02549 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC0.06□□□□□ -2.4
SPTA1P02549 ZNF849P-201ENST00000594711 1566 ntBASIC0.06□□□□□ -2.4
SPTA1P02549 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC0.06□□□□□ -2.4
SPTA1P02549 RNU6-944P-201ENST00000364023 107 ntBASIC0.06□□□□□ -2.4
SPTA1P02549 SNORD114-9-201ENST00000364370 72 ntBASIC0.06□□□□□ -2.4
SPTA1P02549 RNU6-1078P-201ENST00000364522 103 ntBASIC0.06□□□□□ -2.4
SPTA1P02549 SNORD49B-201ENST00000365172 72 ntBASIC0.06□□□□□ -2.4
SPTA1P02549 RNU6-348P-201ENST00000384386 107 ntBASIC0.06□□□□□ -2.4
SPTA1P02549 MIR525-201ENST00000384978 85 ntBASIC0.06□□□□□ -2.4
SPTA1P02549 NCOR1P3-201ENST00000420479 303 ntBASIC0.06□□□□□ -2.4
SPTA1P02549 AL451054.2-201ENST00000420896 202 ntBASIC0.06□□□□□ -2.4
SPTA1P02549 AL512637.2-201ENST00000431287 1256 ntBASIC0.06□□□□□ -2.4
SPTA1P02549 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC0.06□□□□□ -2.4
SPTA1P02549 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.06□□□□□ -2.4
SPTA1P02549 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.06□□□□□ -2.4
SPTA1P02549 MTND1P33-201ENST00000446251 917 ntBASIC0.06□□□□□ -2.4
SPTA1P02549 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC0.06□□□□□ -2.4
SPTA1P02549 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC0.06□□□□□ -2.4
SPTA1P02549 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC0.06□□□□□ -2.4
SPTA1P02549 AC112220.3-201ENST00000605502 502 ntBASIC0.06□□□□□ -2.4
SPTA1P02549 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC0.06□□□□□ -2.4
SPTA1P02549 AL133445.2-201ENST00000611191 527 ntBASIC0.06□□□□□ -2.4
SPTA1P02549 AC009509.4-201ENST00000619202 509 ntBASIC0.06□□□□□ -2.4
SPTA1P02549 SNORD114-31-201ENST00000363219 75 ntBASIC0.06□□□□□ -2.4
SPTA1P02549 UBE2V1P4-201ENST00000425374 344 ntBASIC0.06□□□□□ -2.4
SPTA1P02549 AC073261.1-201ENST00000429409 121 ntBASIC0.06□□□□□ -2.4
SPTA1P02549 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC0.06□□□□□ -2.4
SPTA1P02549 OR6C5P-201ENST00000452388 923 ntBASIC0.06□□□□□ -2.4
SPTA1P02549 AC048334.1-201ENST00000477975 159 ntBASIC0.06□□□□□ -2.4
SPTA1P02549 AC018868.1-201ENST00000491307 315 ntBASIC0.06□□□□□ -2.4
SPTA1P02549 AC109329.1-201ENST00000518744 317 ntBASIC0.06□□□□□ -2.4
SPTA1P02549 IGKV1-22-201ENST00000524313 326 ntBASIC0.06□□□□□ -2.4
SPTA1P02549 RAB11AP2-201ENST00000545905 639 ntBASIC0.06□□□□□ -2.4
SPTA1P02549 AC012213.3-201ENST00000577199 777 ntBASIC0.06□□□□□ -2.4
SPTA1P02549 AC105148.1-201ENST00000604961 409 ntBASIC0.06□□□□□ -2.4
SPTA1P02549 AC010133.1-201ENST00000615809 842 ntBASIC0.06□□□□□ -2.4
SPTA1P02549 RNU6-862P-201ENST00000362804 105 ntBASIC0.05□□□□□ -2.4
SPTA1P02549 RNU6-529P-201ENST00000363383 104 ntBASIC0.05□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms