Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 RNA5SP290-201ENST00000517133 127 ntBASIC3.2□□□□□ -1.9
TOP3BO95985 AC245166.1-201ENST00000521012 253 ntBASIC3.2□□□□□ -1.9
TOP3BO95985 TRAV37-201ENST00000553906 342 ntBASIC3.2□□□□□ -1.9
TOP3BO95985 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.2□□□□□ -1.9
TOP3BO95985 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC3.2□□□□□ -1.9
TOP3BO95985 MIR5692A1-201ENST00000580523 69 ntBASIC3.2□□□□□ -1.9
TOP3BO95985 AC005899.2-201ENST00000584353 90 ntBASIC3.2□□□□□ -1.9
TOP3BO95985 NUTF2P8-201ENST00000604593 363 ntBASIC3.2□□□□□ -1.9
TOP3BO95985 AC018889.1-201ENST00000605372 397 ntBASIC3.2□□□□□ -1.9
TOP3BO95985 AC011373.1-201ENST00000607270 237 ntBASIC3.2□□□□□ -1.9
TOP3BO95985 Z99571.1-201ENST00000636677 394 ntBASIC3.2□□□□□ -1.9
TOP3BO95985 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
TOP3BO95985 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
TOP3BO95985 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.2□□□□□ -1.9
TOP3BO95985 RNU6-238P-201ENST00000363313 106 ntBASIC3.19□□□□□ -1.9
TOP3BO95985 Y_RNA.151-201ENST00000363566 112 ntBASIC3.19□□□□□ -1.9
TOP3BO95985 RNU6-450P-201ENST00000364654 107 ntBASIC3.19□□□□□ -1.9
TOP3BO95985 RNU6-1329P-201ENST00000365664 107 ntBASIC3.19□□□□□ -1.9
TOP3BO95985 MIR578-201ENST00000384828 96 ntBASIC3.19□□□□□ -1.9
TOP3BO95985 AL445529.1-201ENST00000398713 389 ntBASIC3.19□□□□□ -1.9
TOP3BO95985 RNU2-33P-201ENST00000410344 192 ntBASIC3.19□□□□□ -1.9
TOP3BO95985 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.19□□□□□ -1.9
TOP3BO95985 MRPS18CP6-201ENST00000423587 223 ntBASIC3.19□□□□□ -1.9
TOP3BO95985 TRIAP1P1-201ENST00000427062 225 ntBASIC3.19□□□□□ -1.9
TOP3BO95985 AL360271.2-201ENST00000447710 161 ntBASIC3.19□□□□□ -1.9
TOP3BO95985 YWHAEP4-201ENST00000505390 198 ntBASIC3.19□□□□□ -1.9
TOP3BO95985 MTND3P25-201ENST00000509243 135 ntBASIC3.19□□□□□ -1.9
TOP3BO95985 AC091826.1-201ENST00000514065 313 ntBASIC3.19□□□□□ -1.9
TOP3BO95985 RNU6-475P-201ENST00000516073 104 ntBASIC3.19□□□□□ -1.9
TOP3BO95985 RNU6-264P-201ENST00000517134 104 ntBASIC3.19□□□□□ -1.9
TOP3BO95985 Y_RNA.721-201ENST00000517207 102 ntBASIC3.19□□□□□ -1.9
TOP3BO95985 AC009812.2-201ENST00000517657 457 ntBASIC3.19□□□□□ -1.9
TOP3BO95985 AC069113.1-201ENST00000517763 267 ntBASIC3.19□□□□□ -1.9
TOP3BO95985 AC104576.1-201ENST00000524225 88 ntBASIC3.19□□□□□ -1.9
TOP3BO95985 AC109446.1-201ENST00000566172 220 ntBASIC3.19□□□□□ -1.9
TOP3BO95985 MYL12BP1-201ENST00000569826 507 ntBASIC3.19□□□□□ -1.9
TOP3BO95985 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
TOP3BO95985 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
TOP3BO95985 AC093831.2-201ENST00000624393 3427 ntBASIC3.19□□□□□ -1.9
TOP3BO95985 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
TOP3BO95985 AC091812.1-201ENST00000432235 1948 ntBASIC3.19□□□□□ -1.9
TOP3BO95985 AC007785.2-201ENST00000598627 1916 ntBASIC3.19□□□□□ -1.9
TOP3BO95985 AC090740.1-201ENST00000623193 2262 ntBASIC3.18□□□□□ -1.9
TOP3BO95985 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
TOP3BO95985 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.18□□□□□ -1.9
TOP3BO95985 SNORA63.7-201ENST00000365579 123 ntBASIC3.18□□□□□ -1.9
TOP3BO95985 Y_RNA.476-201ENST00000384347 108 ntBASIC3.18□□□□□ -1.9
TOP3BO95985 Y_RNA.485-201ENST00000384395 102 ntBASIC3.18□□□□□ -1.9
TOP3BO95985 MIR301A-201ENST00000385261 86 ntBASIC3.18□□□□□ -1.9
TOP3BO95985 RNU6-823P-201ENST00000391042 103 ntBASIC3.18□□□□□ -1.9
TOP3BO95985 U3.42-201ENST00000408746 214 ntBASIC3.18□□□□□ -1.9
TOP3BO95985 RNU6-101P-201ENST00000410323 104 ntBASIC3.18□□□□□ -1.9
TOP3BO95985 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.18□□□□□ -1.9
TOP3BO95985 HMGB1P9-201ENST00000429856 646 ntBASIC3.18□□□□□ -1.9
TOP3BO95985 AC099799.1-201ENST00000439809 192 ntBASIC3.18□□□□□ -1.9
TOP3BO95985 RPS24P13-201ENST00000442520 397 ntBASIC3.18□□□□□ -1.9
TOP3BO95985 CECR9-201ENST00000453421 199 ntBASIC3.18□□□□□ -1.9
TOP3BO95985 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC3.18□□□□□ -1.9
TOP3BO95985 AC068781.1-201ENST00000488231 618 ntBASIC3.18□□□□□ -1.9
TOP3BO95985 RNU6-237P-201ENST00000515985 71 ntBASIC3.18□□□□□ -1.9
TOP3BO95985 RNU4-77P-201ENST00000516692 156 ntBASIC3.18□□□□□ -1.9
TOP3BO95985 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.18□□□□□ -1.9
TOP3BO95985 TRAV28-201ENST00000557548 323 ntBASIC3.18□□□□□ -1.9
TOP3BO95985 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.18□□□□□ -1.9
TOP3BO95985 MIR2682-201ENST00000580305 110 ntBASIC3.18□□□□□ -1.9
TOP3BO95985 AC073657.2-201ENST00000605661 303 ntBASIC3.18□□□□□ -1.9
TOP3BO95985 RNU6-85P-201ENST00000605989 107 ntBASIC3.18□□□□□ -1.9
TOP3BO95985 SNORD58B-201ENST00000607313 66 ntBASIC3.18□□□□□ -1.9
TOP3BO95985 AL442067.1-201ENST00000613261 223 ntBASIC3.18□□□□□ -1.9
TOP3BO95985 AL031601.2-202ENST00000622650 282 ntBASIC3.18□□□□□ -1.9
TOP3BO95985 AL136164.4-201ENST00000625013 2135 ntBASIC3.18□□□□□ -1.9
TOP3BO95985 NAA50-211ENST00000630058 177 ntTSL 5 BASIC3.18□□□□□ -1.9
TOP3BO95985 AL606534.2-204ENST00000635008 178 ntBASIC3.18□□□□□ -1.9
TOP3BO95985 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
TOP3BO95985 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
TOP3BO95985 RNU6-99P-201ENST00000364721 107 ntBASIC3.17□□□□□ -1.9
TOP3BO95985 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
TOP3BO95985 SNORA54-201ENST00000384281 123 ntBASIC3.17□□□□□ -1.9
TOP3BO95985 Y_RNA.556-201ENST00000384677 113 ntBASIC3.17□□□□□ -1.9
TOP3BO95985 SNORD73A-201ENST00000386062 65 ntBASIC3.17□□□□□ -1.9
TOP3BO95985 RPL21P3-201ENST00000395517 478 ntBASIC3.17□□□□□ -1.9
TOP3BO95985 RNU2-23P-201ENST00000410545 195 ntBASIC3.17□□□□□ -1.9
TOP3BO95985 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
TOP3BO95985 AC092573.2-201ENST00000434546 243 ntBASIC3.17□□□□□ -1.9
TOP3BO95985 NDUFB4P6-201ENST00000436819 366 ntBASIC3.17□□□□□ -1.9
TOP3BO95985 AC011816.1-201ENST00000441346 546 ntBASIC3.17□□□□□ -1.9
TOP3BO95985 AC108938.1-201ENST00000451204 136 ntBASIC3.17□□□□□ -1.9
TOP3BO95985 SSXP4-201ENST00000451349 245 ntBASIC3.17□□□□□ -1.9
TOP3BO95985 AC112492.4-201ENST00000456549 352 ntBASIC3.17□□□□□ -1.9
TOP3BO95985 AC146507.2-201ENST00000460608 476 ntBASIC3.17□□□□□ -1.9
TOP3BO95985 AC010655.3-201ENST00000478818 450 ntBASIC3.17□□□□□ -1.9
TOP3BO95985 SUMO2P6-201ENST00000505273 288 ntBASIC3.17□□□□□ -1.9
TOP3BO95985 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.17□□□□□ -1.9
TOP3BO95985 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.17□□□□□ -1.9
TOP3BO95985 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.17□□□□□ -1.9
TOP3BO95985 LRRC37A5P-203ENST00000580181 585 ntBASIC3.17□□□□□ -1.9
TOP3BO95985 MIR548AC-201ENST00000585049 88 ntBASIC3.17□□□□□ -1.9
TOP3BO95985 AC100812.1-201ENST00000607622 580 ntBASIC3.17□□□□□ -1.9
TOP3BO95985 AC107294.3-201ENST00000609211 526 ntBASIC3.17□□□□□ -1.9
TOP3BO95985 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 147.7 ms