Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 RNU6-944P-201ENST00000364023 107 ntBASIC1.54□□□□□ -2.16
SEMA3DO95025 RNU2-23P-201ENST00000410545 195 ntBASIC1.54□□□□□ -2.16
SEMA3DO95025 RNU2-32P-201ENST00000411193 191 ntBASIC1.54□□□□□ -2.16
SEMA3DO95025 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.54□□□□□ -2.16
SEMA3DO95025 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.54□□□□□ -2.16
SEMA3DO95025 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.54□□□□□ -2.16
SEMA3DO95025 AL365400.1-201ENST00000431854 640 ntBASIC1.54□□□□□ -2.16
SEMA3DO95025 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC1.54□□□□□ -2.16
SEMA3DO95025 AL022238.1-201ENST00000442557 355 ntBASIC1.54□□□□□ -2.16
SEMA3DO95025 GAPDHP17-201ENST00000449858 1001 ntBASIC1.54□□□□□ -2.16
SEMA3DO95025 AL353752.1-201ENST00000454946 260 ntBASIC1.54□□□□□ -2.16
SEMA3DO95025 SNORA44.1-201ENST00000517031 108 ntBASIC1.54□□□□□ -2.16
SEMA3DO95025 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.54□□□□□ -2.16
SEMA3DO95025 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.54□□□□□ -2.16
SEMA3DO95025 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.54□□□□□ -2.16
SEMA3DO95025 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC1.54□□□□□ -2.16
SEMA3DO95025 MIR5692A1-201ENST00000580523 69 ntBASIC1.54□□□□□ -2.16
SEMA3DO95025 AC078795.2-201ENST00000602835 1252 ntBASIC1.54□□□□□ -2.16
SEMA3DO95025 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.54□□□□□ -2.16
SEMA3DO95025 AC004908.3-201ENST00000610248 625 ntBASIC1.54□□□□□ -2.16
SEMA3DO95025 AC087683.2-201ENST00000611384 326 ntBASIC1.54□□□□□ -2.16
SEMA3DO95025 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.54□□□□□ -2.16
SEMA3DO95025 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
SEMA3DO95025 snoU2_19.1-201ENST00000362361 80 ntBASIC1.53□□□□□ -2.16
SEMA3DO95025 Y_RNA.367-201ENST00000365544 101 ntBASIC1.53□□□□□ -2.16
SEMA3DO95025 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
SEMA3DO95025 SNORA40.3-201ENST00000390964 122 ntBASIC1.53□□□□□ -2.16
SEMA3DO95025 RNU2-3P-201ENST00000410144 191 ntBASIC1.53□□□□□ -2.16
SEMA3DO95025 RNA5SP390-201ENST00000410191 113 ntBASIC1.53□□□□□ -2.16
SEMA3DO95025 HMGN1P14-201ENST00000412459 517 ntBASIC1.53□□□□□ -2.16
SEMA3DO95025 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.53□□□□□ -2.16
SEMA3DO95025 BX510359.4-201ENST00000423750 193 ntBASIC1.53□□□□□ -2.16
SEMA3DO95025 AC009961.2-201ENST00000435771 251 ntBASIC1.53□□□□□ -2.16
SEMA3DO95025 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
SEMA3DO95025 AL137159.1-201ENST00000452808 512 ntBASIC1.53□□□□□ -2.16
SEMA3DO95025 ART2BP-201ENST00000453501 499 ntBASIC1.53□□□□□ -2.16
SEMA3DO95025 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.53□□□□□ -2.16
SEMA3DO95025 AC006512.1-201ENST00000468816 291 ntBASIC1.53□□□□□ -2.16
SEMA3DO95025 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC1.53□□□□□ -2.16
SEMA3DO95025 AC116337.1-201ENST00000509680 687 ntBASIC1.53□□□□□ -2.16
SEMA3DO95025 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.53□□□□□ -2.16
SEMA3DO95025 SNORA25.15-201ENST00000516487 89 ntBASIC1.53□□□□□ -2.16
SEMA3DO95025 RNU6-965P-201ENST00000516721 96 ntBASIC1.53□□□□□ -2.16
SEMA3DO95025 AC060788.1-201ENST00000521318 469 ntBASIC1.53□□□□□ -2.16
SEMA3DO95025 AP000763.2-201ENST00000540641 163 ntBASIC1.53□□□□□ -2.16
SEMA3DO95025 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.53□□□□□ -2.16
SEMA3DO95025 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.53□□□□□ -2.16
SEMA3DO95025 AC098848.2-201ENST00000588023 330 ntBASIC1.53□□□□□ -2.16
SEMA3DO95025 AC068944.2-201ENST00000610373 403 ntBASIC1.53□□□□□ -2.16
SEMA3DO95025 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.53□□□□□ -2.16
SEMA3DO95025 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC1.53□□□□□ -2.16
SEMA3DO95025 MIR6715A-201ENST00000615929 79 ntBASIC1.53□□□□□ -2.16
SEMA3DO95025 AC097372.5-201ENST00000623665 376 ntBASIC1.53□□□□□ -2.16
SEMA3DO95025 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.53□□□□□ -2.16
SEMA3DO95025 AP000648.3-201ENST00000623539 4507 ntBASIC1.52□□□□□ -2.17
SEMA3DO95025 MTND5P10-201ENST00000603719 1809 ntBASIC1.52□□□□□ -2.17
SEMA3DO95025 RNU4-21P-201ENST00000362802 126 ntBASIC1.52□□□□□ -2.17
SEMA3DO95025 RNU6-78P-201ENST00000362897 107 ntBASIC1.52□□□□□ -2.17
SEMA3DO95025 RNU6-1210P-201ENST00000363775 107 ntBASIC1.52□□□□□ -2.17
SEMA3DO95025 SNORA62.1-201ENST00000364287 154 ntBASIC1.52□□□□□ -2.17
SEMA3DO95025 RNU6-297P-201ENST00000384636 107 ntBASIC1.52□□□□□ -2.17
SEMA3DO95025 CBX3P9-201ENST00000402326 552 ntBASIC1.52□□□□□ -2.17
SEMA3DO95025 RN7SKP51-201ENST00000410781 304 ntBASIC1.52□□□□□ -2.17
SEMA3DO95025 OR9R1P-201ENST00000412200 877 ntBASIC1.52□□□□□ -2.17
SEMA3DO95025 CYCSP33-201ENST00000414485 327 ntBASIC1.52□□□□□ -2.17
SEMA3DO95025 OR6C66P-201ENST00000414917 930 ntBASIC1.52□□□□□ -2.17
SEMA3DO95025 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC1.52□□□□□ -2.17
SEMA3DO95025 AL365203.2-201ENST00000423444 196 ntBASIC1.52□□□□□ -2.17
SEMA3DO95025 RPL31P35-201ENST00000431058 377 ntBASIC1.52□□□□□ -2.17
SEMA3DO95025 MTND2P29-201ENST00000438595 412 ntBASIC1.52□□□□□ -2.17
SEMA3DO95025 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.52□□□□□ -2.17
SEMA3DO95025 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.52□□□□□ -2.17
SEMA3DO95025 FDX1P2-201ENST00000450769 375 ntBASIC1.52□□□□□ -2.17
SEMA3DO95025 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC1.52□□□□□ -2.17
SEMA3DO95025 AL162395.1-201ENST00000457882 422 ntBASIC1.52□□□□□ -2.17
SEMA3DO95025 snoU13.23-201ENST00000458863 104 ntBASIC1.52□□□□□ -2.17
SEMA3DO95025 RNU1-98P-201ENST00000458992 160 ntBASIC1.52□□□□□ -2.17
SEMA3DO95025 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC1.52□□□□□ -2.17
SEMA3DO95025 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.52□□□□□ -2.17
SEMA3DO95025 MTND1P22-201ENST00000510572 951 ntBASIC1.52□□□□□ -2.17
SEMA3DO95025 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.52□□□□□ -2.17
SEMA3DO95025 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC1.52□□□□□ -2.17
SEMA3DO95025 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.52□□□□□ -2.17
SEMA3DO95025 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.52□□□□□ -2.17
SEMA3DO95025 AC026271.5-201ENST00000577873 130 ntBASIC1.52□□□□□ -2.17
SEMA3DO95025 SNRPGP17-201ENST00000603780 214 ntBASIC1.52□□□□□ -2.17
SEMA3DO95025 AL670379.2-201ENST00000604983 252 ntBASIC1.52□□□□□ -2.17
SEMA3DO95025 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.52□□□□□ -2.17
SEMA3DO95025 MIR8081-201ENST00000611533 95 ntBASIC1.52□□□□□ -2.17
SEMA3DO95025 RMST_4.1-201ENST00000616886 107 ntBASIC1.52□□□□□ -2.17
SEMA3DO95025 AC108479.2-201ENST00000617314 601 ntBASIC1.52□□□□□ -2.17
SEMA3DO95025 AC138649.3-201ENST00000622154 254 ntBASIC1.52□□□□□ -2.17
SEMA3DO95025 MIR7843-201ENST00000622274 79 ntBASIC1.52□□□□□ -2.17
SEMA3DO95025 AC011155.2-201ENST00000623202 216 ntBASIC1.52□□□□□ -2.17
SEMA3DO95025 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.52□□□□□ -2.17
SEMA3DO95025 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.52□□□□□ -2.17
SEMA3DO95025 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.51□□□□□ -2.17
SEMA3DO95025 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
SEMA3DO95025 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
SEMA3DO95025 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms