Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 RNU6-11P-201ENST00000364234 107 ntBASIC1.3□□□□□ -2.2
UPK1BO75841 RNU6-1303P-201ENST00000364841 107 ntBASIC1.3□□□□□ -2.2
UPK1BO75841 RNU6-25P-201ENST00000383873 107 ntBASIC1.3□□□□□ -2.2
UPK1BO75841 RNU6-1-201ENST00000383898 107 ntBASIC1.3□□□□□ -2.2
UPK1BO75841 RNU6-48P-201ENST00000384161 107 ntBASIC1.3□□□□□ -2.2
UPK1BO75841 RNU6-36P-201ENST00000384172 107 ntBASIC1.3□□□□□ -2.2
UPK1BO75841 RNU6-4P-201ENST00000384205 107 ntBASIC1.3□□□□□ -2.2
UPK1BO75841 RNU6-5P-201ENST00000384238 107 ntBASIC1.3□□□□□ -2.2
UPK1BO75841 RNU6-3P-201ENST00000384314 107 ntBASIC1.3□□□□□ -2.2
UPK1BO75841 RNU6-16P-201ENST00000384385 107 ntBASIC1.3□□□□□ -2.2
UPK1BO75841 RNU6-45P-201ENST00000384471 107 ntBASIC1.3□□□□□ -2.2
UPK1BO75841 RNU6-15P-201ENST00000384534 107 ntBASIC1.3□□□□□ -2.2
UPK1BO75841 RNU6-1222P-201ENST00000384615 107 ntBASIC1.3□□□□□ -2.2
UPK1BO75841 RNU6-2-201ENST00000384627 107 ntBASIC1.3□□□□□ -2.2
UPK1BO75841 RNU6-29P-201ENST00000384637 107 ntBASIC1.3□□□□□ -2.2
UPK1BO75841 RNU6-9-201ENST00000384776 107 ntBASIC1.3□□□□□ -2.2
UPK1BO75841 RNU6-33P-201ENST00000384793 107 ntBASIC1.3□□□□□ -2.2
UPK1BO75841 MIR30A-201ENST00000385092 71 ntBASIC1.3□□□□□ -2.2
UPK1BO75841 MIR934-201ENST00000401241 83 ntBASIC1.3□□□□□ -2.2
UPK1BO75841 RNU6-195P-201ENST00000411352 109 ntBASIC1.3□□□□□ -2.2
UPK1BO75841 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.3□□□□□ -2.2
UPK1BO75841 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.3□□□□□ -2.2
UPK1BO75841 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
UPK1BO75841 AC005908.1-201ENST00000468701 347 ntBASIC1.3□□□□□ -2.2
UPK1BO75841 AC010409.1-201ENST00000487382 476 ntBASIC1.3□□□□□ -2.2
UPK1BO75841 AC145146.1-201ENST00000496370 254 ntBASIC1.3□□□□□ -2.2
UPK1BO75841 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC1.3□□□□□ -2.2
UPK1BO75841 AC074344.1-201ENST00000512823 224 ntBASIC1.3□□□□□ -2.2
UPK1BO75841 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.3□□□□□ -2.2
UPK1BO75841 RNA5SP490-201ENST00000517141 136 ntBASIC1.3□□□□□ -2.2
UPK1BO75841 AC087883.1-201ENST00000551882 391 ntBASIC1.3□□□□□ -2.2
UPK1BO75841 TRAV32-201ENST00000553993 340 ntBASIC1.3□□□□□ -2.2
UPK1BO75841 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.3□□□□□ -2.2
UPK1BO75841 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.3□□□□□ -2.2
UPK1BO75841 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.3□□□□□ -2.2
UPK1BO75841 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
UPK1BO75841 RNU6-6P-201ENST00000606623 107 ntBASIC1.3□□□□□ -2.2
UPK1BO75841 AC027449.1-201ENST00000608890 407 ntBASIC1.3□□□□□ -2.2
UPK1BO75841 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.3□□□□□ -2.2
UPK1BO75841 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.3□□□□□ -2.2
UPK1BO75841 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
UPK1BO75841 WWP1P1-201ENST00000466609 2769 ntBASIC1.3□□□□□ -2.2
UPK1BO75841 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.29□□□□□ -2.2
UPK1BO75841 RNU6-1285P-201ENST00000363480 105 ntBASIC1.29□□□□□ -2.2
UPK1BO75841 RNU6-105P-201ENST00000363909 104 ntBASIC1.29□□□□□ -2.2
UPK1BO75841 SNORA62.1-201ENST00000364287 154 ntBASIC1.29□□□□□ -2.2
UPK1BO75841 RNY4P34-201ENST00000364779 95 ntBASIC1.29□□□□□ -2.2
UPK1BO75841 RNU6-338P-201ENST00000383888 105 ntBASIC1.29□□□□□ -2.2
UPK1BO75841 RNU6-550P-201ENST00000391057 101 ntBASIC1.29□□□□□ -2.2
UPK1BO75841 Y_RNA.598-201ENST00000410480 95 ntBASIC1.29□□□□□ -2.2
UPK1BO75841 RNU2-8P-201ENST00000410727 190 ntBASIC1.29□□□□□ -2.2
UPK1BO75841 RNU6-387P-201ENST00000411331 105 ntBASIC1.29□□□□□ -2.2
UPK1BO75841 AL135786.1-201ENST00000415892 214 ntBASIC1.29□□□□□ -2.2
UPK1BO75841 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC1.29□□□□□ -2.2
UPK1BO75841 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.29□□□□□ -2.2
UPK1BO75841 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.29□□□□□ -2.2
UPK1BO75841 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC1.29□□□□□ -2.2
UPK1BO75841 HMGB1P18-201ENST00000438801 619 ntBASIC1.29□□□□□ -2.2
UPK1BO75841 AC243964.1-201ENST00000441814 261 ntBASIC1.29□□□□□ -2.2
UPK1BO75841 ZNF736P12Y-201ENST00000443152 1243 ntBASIC1.29□□□□□ -2.2
UPK1BO75841 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC1.29□□□□□ -2.2
UPK1BO75841 HMGN2P18-201ENST00000450680 270 ntBASIC1.29□□□□□ -2.2
UPK1BO75841 MTCYBP1-201ENST00000454315 1119 ntBASIC1.29□□□□□ -2.2
UPK1BO75841 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC1.29□□□□□ -2.2
UPK1BO75841 AC130509.1-201ENST00000464158 433 ntBASIC1.29□□□□□ -2.2
UPK1BO75841 RPL9P6-201ENST00000492764 598 ntBASIC1.29□□□□□ -2.2
UPK1BO75841 FAM206BP-201ENST00000510179 541 ntBASIC1.29□□□□□ -2.2
UPK1BO75841 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.29□□□□□ -2.2
UPK1BO75841 SNORA31.17-201ENST00000516953 127 ntBASIC1.29□□□□□ -2.2
UPK1BO75841 AC090572.1-201ENST00000519251 160 ntBASIC1.29□□□□□ -2.2
UPK1BO75841 AP001893.2-201ENST00000526949 202 ntBASIC1.29□□□□□ -2.2
UPK1BO75841 AC008269.2-201ENST00000561915 1105 ntBASIC1.29□□□□□ -2.2
UPK1BO75841 AC002400.1-201ENST00000569310 726 ntBASIC1.29□□□□□ -2.2
UPK1BO75841 AC090578.1-201ENST00000604955 591 ntBASIC1.29□□□□□ -2.2
UPK1BO75841 AC004223.4-201ENST00000612426 332 ntBASIC1.29□□□□□ -2.2
UPK1BO75841 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.29□□□□□ -2.2
UPK1BO75841 SNORD32B-201ENST00000364460 84 ntBASIC1.28□□□□□ -2.2
UPK1BO75841 Y_RNA.324-201ENST00000365165 102 ntBASIC1.28□□□□□ -2.2
UPK1BO75841 Y_RNA.367-201ENST00000365544 101 ntBASIC1.28□□□□□ -2.2
UPK1BO75841 RNU6-692P-201ENST00000384496 107 ntBASIC1.28□□□□□ -2.2
UPK1BO75841 MIR150-201ENST00000385048 84 ntBASIC1.28□□□□□ -2.2
UPK1BO75841 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
UPK1BO75841 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
UPK1BO75841 AC073614.1-201ENST00000438690 650 ntBASIC1.28□□□□□ -2.2
UPK1BO75841 AL162395.1-201ENST00000457882 422 ntBASIC1.28□□□□□ -2.2
UPK1BO75841 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.28□□□□□ -2.2
UPK1BO75841 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC1.28□□□□□ -2.2
UPK1BO75841 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.28□□□□□ -2.2
UPK1BO75841 RPL38P4-201ENST00000502376 214 ntBASIC1.28□□□□□ -2.2
UPK1BO75841 MTND3P5-201ENST00000512798 333 ntBASIC1.28□□□□□ -2.2
UPK1BO75841 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC1.28□□□□□ -2.2
UPK1BO75841 FABP5P5-201ENST00000515537 406 ntBASIC1.28□□□□□ -2.2
UPK1BO75841 SNORA3.4-201ENST00000515969 96 ntBASIC1.28□□□□□ -2.2
UPK1BO75841 RNU6-1178P-201ENST00000516674 107 ntBASIC1.28□□□□□ -2.2
UPK1BO75841 Vault.3-201ENST00000516676 95 ntBASIC1.28□□□□□ -2.2
UPK1BO75841 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.28□□□□□ -2.2
UPK1BO75841 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.28□□□□□ -2.2
UPK1BO75841 MIR3198-2-201ENST00000577868 80 ntBASIC1.28□□□□□ -2.2
UPK1BO75841 AC103987.3-201ENST00000582071 292 ntBASIC1.28□□□□□ -2.2
UPK1BO75841 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 188.7 ms