Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 MIR569-201ENST00000385228 96 ntBASIC3.7□□□□□ -1.82
TRIM13O60858 Z98941.1-201ENST00000407764 100 ntBASIC3.7□□□□□ -1.82
TRIM13O60858 AL357139.1-201ENST00000407792 426 ntBASIC3.7□□□□□ -1.82
TRIM13O60858 AP000907.1-201ENST00000428428 510 ntBASIC3.7□□□□□ -1.82
TRIM13O60858 RPS15AP7-201ENST00000439294 405 ntBASIC3.7□□□□□ -1.82
TRIM13O60858 RPS29P31-201ENST00000446147 164 ntBASIC3.7□□□□□ -1.82
TRIM13O60858 AL162151.2-201ENST00000448875 158 ntBASIC3.7□□□□□ -1.82
TRIM13O60858 RPL26P26-201ENST00000480251 434 ntBASIC3.7□□□□□ -1.82
TRIM13O60858 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.7□□□□□ -1.82
TRIM13O60858 AC078817.1-201ENST00000492623 435 ntBASIC3.7□□□□□ -1.82
TRIM13O60858 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.7□□□□□ -1.82
TRIM13O60858 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC3.7□□□□□ -1.82
TRIM13O60858 RNA5SP164-201ENST00000516533 110 ntBASIC3.7□□□□□ -1.82
TRIM13O60858 RNU6-143P-201ENST00000516942 93 ntBASIC3.7□□□□□ -1.82
TRIM13O60858 RNU6-1073P-201ENST00000517182 106 ntBASIC3.7□□□□□ -1.82
TRIM13O60858 AC084851.1-201ENST00000529105 249 ntBASIC3.7□□□□□ -1.82
TRIM13O60858 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC3.7□□□□□ -1.82
TRIM13O60858 MIR4738-201ENST00000579134 87 ntBASIC3.7□□□□□ -1.82
TRIM13O60858 AC010928.2-201ENST00000588017 287 ntBASIC3.7□□□□□ -1.82
TRIM13O60858 AL359881.1-201ENST00000602916 267 ntBASIC3.7□□□□□ -1.82
TRIM13O60858 RPL23AP88-201ENST00000605759 454 ntBASIC3.7□□□□□ -1.82
TRIM13O60858 SNORA62.6-201ENST00000606322 83 ntBASIC3.7□□□□□ -1.82
TRIM13O60858 AC112200.1-201ENST00000625015 234 ntBASIC3.7□□□□□ -1.82
TRIM13O60858 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
TRIM13O60858 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.7□□□□□ -1.82
TRIM13O60858 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
TRIM13O60858 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.69□□□□□ -1.82
TRIM13O60858 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
TRIM13O60858 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
TRIM13O60858 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.69□□□□□ -1.82
TRIM13O60858 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.69□□□□□ -1.82
TRIM13O60858 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
TRIM13O60858 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.69□□□□□ -1.82
TRIM13O60858 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
TRIM13O60858 RNU6-428P-201ENST00000362942 107 ntBASIC3.69□□□□□ -1.82
TRIM13O60858 RNU6-653P-201ENST00000363074 106 ntBASIC3.69□□□□□ -1.82
TRIM13O60858 Y_RNA.127-201ENST00000363386 109 ntBASIC3.69□□□□□ -1.82
TRIM13O60858 RNU6-283P-201ENST00000364788 107 ntBASIC3.69□□□□□ -1.82
TRIM13O60858 RNU6-17P-201ENST00000384245 107 ntBASIC3.69□□□□□ -1.82
TRIM13O60858 RNU6-18P-201ENST00000384527 107 ntBASIC3.69□□□□□ -1.82
TRIM13O60858 Y_RNA.570-201ENST00000384750 101 ntBASIC3.69□□□□□ -1.82
TRIM13O60858 Y_RNA.571-201ENST00000384753 98 ntBASIC3.69□□□□□ -1.82
TRIM13O60858 RNU6-1025P-201ENST00000410629 104 ntBASIC3.69□□□□□ -1.82
TRIM13O60858 AL158156.1-201ENST00000422509 473 ntBASIC3.69□□□□□ -1.82
TRIM13O60858 AC245028.1-201ENST00000423259 256 ntBASIC3.69□□□□□ -1.82
TRIM13O60858 RPL27AP8-201ENST00000424277 446 ntBASIC3.69□□□□□ -1.82
TRIM13O60858 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.69□□□□□ -1.82
TRIM13O60858 CR769767.1-201ENST00000436337 346 ntBASIC3.69□□□□□ -1.82
TRIM13O60858 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.69□□□□□ -1.82
TRIM13O60858 YWHAEP4-201ENST00000505390 198 ntBASIC3.69□□□□□ -1.82
TRIM13O60858 SNORA31.8-201ENST00000516327 108 ntBASIC3.69□□□□□ -1.82
TRIM13O60858 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.69□□□□□ -1.82
TRIM13O60858 MIR4330-201ENST00000579077 105 ntBASIC3.69□□□□□ -1.82
TRIM13O60858 AC008749.1-201ENST00000597650 306 ntBASIC3.69□□□□□ -1.82
TRIM13O60858 SCARNA4-201ENST00000629045 128 ntBASIC3.69□□□□□ -1.82
TRIM13O60858 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC3.69□□□□□ -1.82
TRIM13O60858 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.69□□□□□ -1.82
TRIM13O60858 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
TRIM13O60858 AC233981.2-201ENST00000611524 1614 ntBASIC3.69□□□□□ -1.82
TRIM13O60858 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
TRIM13O60858 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
TRIM13O60858 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
TRIM13O60858 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
TRIM13O60858 AL109809.4-201ENST00000603520 2185 ntBASIC3.68□□□□□ -1.82
TRIM13O60858 AC106871.1-201ENST00000568324 3102 ntBASIC3.68□□□□□ -1.82
TRIM13O60858 RNU4-84P-201ENST00000364200 139 ntBASIC3.68□□□□□ -1.82
TRIM13O60858 Y_RNA.217-201ENST00000364214 105 ntBASIC3.68□□□□□ -1.82
TRIM13O60858 RNU6-879P-201ENST00000364328 108 ntBASIC3.68□□□□□ -1.82
TRIM13O60858 RNU6-1325P-201ENST00000364905 105 ntBASIC3.68□□□□□ -1.82
TRIM13O60858 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
TRIM13O60858 RNA5SP424-201ENST00000390988 115 ntBASIC3.68□□□□□ -1.82
TRIM13O60858 RNA5SP213-201ENST00000391031 106 ntBASIC3.68□□□□□ -1.82
TRIM13O60858 RNU1-139P-201ENST00000391307 165 ntBASIC3.68□□□□□ -1.82
TRIM13O60858 AL022722.2-201ENST00000402519 180 ntBASIC3.68□□□□□ -1.82
TRIM13O60858 SNORD12B-201ENST00000410433 91 ntBASIC3.68□□□□□ -1.82
TRIM13O60858 SNORA57.3-201ENST00000411095 141 ntBASIC3.68□□□□□ -1.82
TRIM13O60858 AL159169.1-201ENST00000421119 127 ntBASIC3.68□□□□□ -1.82
TRIM13O60858 AC006989.1-201ENST00000427212 131 ntBASIC3.68□□□□□ -1.82
TRIM13O60858 MRPS10P1-201ENST00000448483 130 ntBASIC3.68□□□□□ -1.82
TRIM13O60858 Y_RNA.641-201ENST00000459414 105 ntBASIC3.68□□□□□ -1.82
TRIM13O60858 RPS20P22-201ENST00000473700 357 ntBASIC3.68□□□□□ -1.82
TRIM13O60858 AC005840.1-201ENST00000498412 377 ntBASIC3.68□□□□□ -1.82
TRIM13O60858 RNA5SP272-201ENST00000516095 111 ntBASIC3.68□□□□□ -1.82
TRIM13O60858 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.68□□□□□ -1.82
TRIM13O60858 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.68□□□□□ -1.82
TRIM13O60858 U7.8-201ENST00000619968 63 ntBASIC3.68□□□□□ -1.82
TRIM13O60858 AC090617.7-201ENST00000623952 126 ntBASIC3.68□□□□□ -1.82
TRIM13O60858 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
TRIM13O60858 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.68□□□□□ -1.82
TRIM13O60858 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.68□□□□□ -1.82
TRIM13O60858 AC135776.4-201ENST00000624300 1904 ntBASIC3.68□□□□□ -1.82
TRIM13O60858 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
TRIM13O60858 RNU6-1298P-201ENST00000362456 101 ntBASIC3.67□□□□□ -1.82
TRIM13O60858 RNU6-1167P-201ENST00000363227 94 ntBASIC3.67□□□□□ -1.82
TRIM13O60858 Y_RNA.218-201ENST00000364218 104 ntBASIC3.67□□□□□ -1.82
TRIM13O60858 RNU6-312P-201ENST00000364629 107 ntBASIC3.67□□□□□ -1.82
TRIM13O60858 RNU6-818P-201ENST00000364837 108 ntBASIC3.67□□□□□ -1.82
TRIM13O60858 RNU6-843P-201ENST00000384454 104 ntBASIC3.67□□□□□ -1.82
TRIM13O60858 AL356095.1-201ENST00000417217 199 ntBASIC3.67□□□□□ -1.82
TRIM13O60858 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms