Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 NDUFA8P1-201ENST00000605525 367 ntBASIC1.93□□□□□ -2.1
HCN1O60741 AC008945.2-201ENST00000606056 604 ntBASIC1.93□□□□□ -2.1
HCN1O60741 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.93□□□□□ -2.1
HCN1O60741 AC096772.1-201ENST00000609146 564 ntBASIC1.93□□□□□ -2.1
HCN1O60741 AC026585.1-201ENST00000619582 524 ntBASIC1.93□□□□□ -2.1
HCN1O60741 RMST_7.1-201ENST00000621935 268 ntBASIC1.93□□□□□ -2.1
HCN1O60741 DUXAP9-208ENST00000622815 614 ntBASIC1.93□□□□□ -2.1
HCN1O60741 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
HCN1O60741 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
HCN1O60741 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
HCN1O60741 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
HCN1O60741 OR4G2P-201ENST00000328113 903 ntBASIC1.92□□□□□ -2.1
HCN1O60741 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.92□□□□□ -2.1
HCN1O60741 RNU6-1120P-201ENST00000362988 108 ntBASIC1.92□□□□□ -2.1
HCN1O60741 Y_RNA.159-201ENST00000363674 87 ntBASIC1.92□□□□□ -2.1
HCN1O60741 RNU6-1303P-201ENST00000364841 107 ntBASIC1.92□□□□□ -2.1
HCN1O60741 RNU6-1032P-201ENST00000384100 107 ntBASIC1.92□□□□□ -2.1
HCN1O60741 Y_RNA.582-201ENST00000391023 95 ntBASIC1.92□□□□□ -2.1
HCN1O60741 RNU4-46P-201ENST00000410818 138 ntBASIC1.92□□□□□ -2.1
HCN1O60741 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.92□□□□□ -2.1
HCN1O60741 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
HCN1O60741 MTND1P18-201ENST00000448191 573 ntBASIC1.92□□□□□ -2.1
HCN1O60741 AC012308.1-201ENST00000451232 178 ntBASIC1.92□□□□□ -2.1
HCN1O60741 MTCO2P18-201ENST00000457151 658 ntBASIC1.92□□□□□ -2.1
HCN1O60741 snoU13.23-201ENST00000458863 104 ntBASIC1.92□□□□□ -2.1
HCN1O60741 Y_RNA.638-201ENST00000459374 113 ntBASIC1.92□□□□□ -2.1
HCN1O60741 AC079382.1-201ENST00000493346 557 ntBASIC1.92□□□□□ -2.1
HCN1O60741 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.92□□□□□ -2.1
HCN1O60741 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.92□□□□□ -2.1
HCN1O60741 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.92□□□□□ -2.1
HCN1O60741 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.92□□□□□ -2.1
HCN1O60741 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.92□□□□□ -2.1
HCN1O60741 ANP32BP3-201ENST00000559213 706 ntBASIC1.92□□□□□ -2.1
HCN1O60741 DEFB122-202ENST00000569013 197 ntBASIC1.92□□□□□ -2.1
HCN1O60741 MIR4703-201ENST00000577728 79 ntBASIC1.92□□□□□ -2.1
HCN1O60741 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC1.92□□□□□ -2.1
HCN1O60741 AL627230.6-201ENST00000611129 280 ntBASIC1.92□□□□□ -2.1
HCN1O60741 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.92□□□□□ -2.1
HCN1O60741 MIR5739-201ENST00000619803 80 ntBASIC1.92□□□□□ -2.1
HCN1O60741 AC091932.3-201ENST00000624223 323 ntBASIC1.92□□□□□ -2.1
HCN1O60741 ZNF680P1-201ENST00000436625 1469 ntBASIC1.92□□□□□ -2.1
HCN1O60741 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
HCN1O60741 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.92□□□□□ -2.1
HCN1O60741 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.91□□□□□ -2.1
HCN1O60741 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
HCN1O60741 RNU6-1010P-201ENST00000362757 107 ntBASIC1.91□□□□□ -2.1
HCN1O60741 RNU6-529P-201ENST00000363383 104 ntBASIC1.91□□□□□ -2.1
HCN1O60741 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
HCN1O60741 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
HCN1O60741 RNU5A-6P-201ENST00000384136 116 ntBASIC1.91□□□□□ -2.1
HCN1O60741 RNU1-57P-201ENST00000384491 166 ntBASIC1.91□□□□□ -2.1
HCN1O60741 GSTA9P-201ENST00000406231 611 ntBASIC1.91□□□□□ -2.1
HCN1O60741 EDDM3CP-201ENST00000415977 425 ntBASIC1.91□□□□□ -2.1
HCN1O60741 AC074117.2-201ENST00000417130 397 ntBASIC1.91□□□□□ -2.1
HCN1O60741 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.91□□□□□ -2.1
HCN1O60741 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.91□□□□□ -2.1
HCN1O60741 AC073464.1-201ENST00000429823 534 ntBASIC1.91□□□□□ -2.1
HCN1O60741 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.91□□□□□ -2.1
HCN1O60741 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.91□□□□□ -2.1
HCN1O60741 AL356010.1-201ENST00000456364 102 ntBASIC1.91□□□□□ -2.1
HCN1O60741 AC091133.4-201ENST00000511142 308 ntBASIC1.91□□□□□ -2.1
HCN1O60741 AC074344.1-201ENST00000512823 224 ntBASIC1.91□□□□□ -2.1
HCN1O60741 AC104136.1-201ENST00000512969 394 ntBASIC1.91□□□□□ -2.1
HCN1O60741 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
HCN1O60741 PSMA3P-201ENST00000555485 635 ntBASIC1.91□□□□□ -2.1
HCN1O60741 RPL30P11-203ENST00000598995 310 ntBASIC1.91□□□□□ -2.1
HCN1O60741 AC073410.2-201ENST00000603240 332 ntBASIC1.91□□□□□ -2.1
HCN1O60741 AC009314.1-201ENST00000603871 304 ntBASIC1.91□□□□□ -2.1
HCN1O60741 AL355297.2-201ENST00000604792 129 ntBASIC1.91□□□□□ -2.1
HCN1O60741 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.91□□□□□ -2.1
HCN1O60741 AC048344.4-201ENST00000619744 527 ntBASIC1.91□□□□□ -2.1
HCN1O60741 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.91□□□□□ -2.1
HCN1O60741 HAUS6P2-201ENST00000433254 2404 ntBASIC1.91□□□□□ -2.1
HCN1O60741 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
HCN1O60741 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.91□□□□□ -2.1
HCN1O60741 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.91□□□□□ -2.1
HCN1O60741 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.9□□□□□ -2.1
HCN1O60741 CENPCP1-201ENST00000533085 2578 ntBASIC1.9□□□□□ -2.11
HCN1O60741 Y_RNA.40-201ENST00000362645 93 ntBASIC1.9□□□□□ -2.11
HCN1O60741 RNU6-78P-201ENST00000362897 107 ntBASIC1.9□□□□□ -2.11
HCN1O60741 SNORD56.1-201ENST00000362913 68 ntBASIC1.9□□□□□ -2.11
HCN1O60741 RNU6-1159P-201ENST00000362933 107 ntBASIC1.9□□□□□ -2.11
HCN1O60741 Y_RNA.296-201ENST00000364930 108 ntBASIC1.9□□□□□ -2.11
HCN1O60741 RNA5SP240-201ENST00000365355 128 ntBASIC1.9□□□□□ -2.11
HCN1O60741 RNU6-487P-201ENST00000365430 104 ntBASIC1.9□□□□□ -2.11
HCN1O60741 MIR186-201ENST00000384988 86 ntBASIC1.9□□□□□ -2.11
HCN1O60741 MIR676-201ENST00000390702 67 ntBASIC1.9□□□□□ -2.11
HCN1O60741 AL512604.1-201ENST00000404812 257 ntBASIC1.9□□□□□ -2.11
HCN1O60741 RAP1BP3-201ENST00000407180 549 ntBASIC1.9□□□□□ -2.11
HCN1O60741 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.9□□□□□ -2.11
HCN1O60741 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.9□□□□□ -2.11
HCN1O60741 AL445646.1-201ENST00000431784 216 ntBASIC1.9□□□□□ -2.11
HCN1O60741 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.9□□□□□ -2.11
HCN1O60741 AC009238.1-201ENST00000442165 424 ntBASIC1.9□□□□□ -2.11
HCN1O60741 AC009237.6-201ENST00000446969 424 ntBASIC1.9□□□□□ -2.11
HCN1O60741 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.9□□□□□ -2.11
HCN1O60741 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.9□□□□□ -2.11
HCN1O60741 GMFBP1-201ENST00000467831 427 ntBASIC1.9□□□□□ -2.11
HCN1O60741 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.9□□□□□ -2.11
HCN1O60741 HMGB1P29-201ENST00000505659 499 ntBASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms