Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 RNU6-293P-201ENST00000411259 106 ntBASIC2.49□□□□□ -2.01
SSX4O60224 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.49□□□□□ -2.01
SSX4O60224 AC009161.1-201ENST00000417306 376 ntBASIC2.49□□□□□ -2.01
SSX4O60224 BX276092.3-201ENST00000424182 230 ntBASIC2.49□□□□□ -2.01
SSX4O60224 AL513185.2-201ENST00000425543 193 ntBASIC2.49□□□□□ -2.01
SSX4O60224 AC092427.1-202ENST00000430569 476 ntBASIC2.49□□□□□ -2.01
SSX4O60224 AC087499.2-201ENST00000432861 149 ntBASIC2.49□□□□□ -2.01
SSX4O60224 AL359672.1-201ENST00000442302 409 ntBASIC2.49□□□□□ -2.01
SSX4O60224 AC003982.1-202ENST00000469928 248 ntBASIC2.49□□□□□ -2.01
SSX4O60224 AC008628.2-201ENST00000502605 298 ntBASIC2.49□□□□□ -2.01
SSX4O60224 AC023141.11-201ENST00000508864 202 ntBASIC2.49□□□□□ -2.01
SSX4O60224 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.49□□□□□ -2.01
SSX4O60224 SMURF2P1-201ENST00000514992 481 ntBASIC2.49□□□□□ -2.01
SSX4O60224 RNU6-1332P-201ENST00000516666 104 ntBASIC2.49□□□□□ -2.01
SSX4O60224 AC104576.1-201ENST00000524225 88 ntBASIC2.49□□□□□ -2.01
SSX4O60224 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.49□□□□□ -2.01
SSX4O60224 PSMA3P-201ENST00000555485 635 ntBASIC2.49□□□□□ -2.01
SSX4O60224 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.49□□□□□ -2.01
SSX4O60224 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.49□□□□□ -2.01
SSX4O60224 MIR4319-201ENST00000577285 85 ntBASIC2.49□□□□□ -2.01
SSX4O60224 AC060780.3-201ENST00000589464 80 ntBASIC2.49□□□□□ -2.01
SSX4O60224 AL356280.1-201ENST00000603614 379 ntBASIC2.49□□□□□ -2.01
SSX4O60224 AC064836.2-201ENST00000609491 462 ntBASIC2.49□□□□□ -2.01
SSX4O60224 AC244517.12-201ENST00000623581 663 ntBASIC2.49□□□□□ -2.01
SSX4O60224 AC010297.1-201ENST00000623948 149 ntBASIC2.49□□□□□ -2.01
SSX4O60224 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.49□□□□□ -2.01
SSX4O60224 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.49□□□□□ -2.01
SSX4O60224 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
SSX4O60224 MTND4P27-201ENST00000450813 1354 ntBASIC2.49□□□□□ -2.01
SSX4O60224 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
SSX4O60224 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
SSX4O60224 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
SSX4O60224 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.48□□□□□ -2.01
SSX4O60224 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
SSX4O60224 AL035425.3-201ENST00000564206 4996 ntBASIC2.48□□□□□ -2.01
SSX4O60224 RNU6-1329P-201ENST00000365664 107 ntBASIC2.48□□□□□ -2.01
SSX4O60224 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
SSX4O60224 SNORA18.3-201ENST00000384122 132 ntBASIC2.48□□□□□ -2.01
SSX4O60224 RNU6-301P-201ENST00000384277 107 ntBASIC2.48□□□□□ -2.01
SSX4O60224 MIR592-201ENST00000384959 97 ntBASIC2.48□□□□□ -2.01
SSX4O60224 AL445529.1-201ENST00000398713 389 ntBASIC2.48□□□□□ -2.01
SSX4O60224 RPS29P13-201ENST00000402041 169 ntBASIC2.48□□□□□ -2.01
SSX4O60224 RNA5SP184-201ENST00000411071 108 ntBASIC2.48□□□□□ -2.01
SSX4O60224 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.48□□□□□ -2.01
SSX4O60224 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.48□□□□□ -2.01
SSX4O60224 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.48□□□□□ -2.01
SSX4O60224 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.48□□□□□ -2.01
SSX4O60224 AL445687.1-201ENST00000439946 251 ntBASIC2.48□□□□□ -2.01
SSX4O60224 AC243964.1-201ENST00000441814 261 ntBASIC2.48□□□□□ -2.01
SSX4O60224 RPL30P12-201ENST00000474666 353 ntBASIC2.48□□□□□ -2.01
SSX4O60224 AC018437.1-201ENST00000492214 406 ntBASIC2.48□□□□□ -2.01
SSX4O60224 AF213884.2-201ENST00000510417 903 ntBASIC2.48□□□□□ -2.01
SSX4O60224 RN7SKP132-201ENST00000516001 208 ntBASIC2.48□□□□□ -2.01
SSX4O60224 SNORA31.18-201ENST00000517043 134 ntBASIC2.48□□□□□ -2.01
SSX4O60224 CKS1BP7-201ENST00000522230 235 ntBASIC2.48□□□□□ -2.01
SSX4O60224 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.48□□□□□ -2.01
SSX4O60224 AC105137.2-201ENST00000569073 466 ntBASIC2.48□□□□□ -2.01
SSX4O60224 ELOCP5-201ENST00000604924 333 ntBASIC2.48□□□□□ -2.01
SSX4O60224 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
SSX4O60224 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.48□□□□□ -2.01
SSX4O60224 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
SSX4O60224 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
SSX4O60224 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.47□□□□□ -2.01
SSX4O60224 RNU6-1010P-201ENST00000362757 107 ntBASIC2.47□□□□□ -2.01
SSX4O60224 RNA5SP393-201ENST00000363423 117 ntBASIC2.47□□□□□ -2.01
SSX4O60224 Y_RNA.414-201ENST00000384011 101 ntBASIC2.47□□□□□ -2.01
SSX4O60224 SNORA32.2-201ENST00000384049 122 ntBASIC2.47□□□□□ -2.01
SSX4O60224 RNU6-214P-201ENST00000384130 107 ntBASIC2.47□□□□□ -2.01
SSX4O60224 MIR544A-201ENST00000384855 91 ntBASIC2.47□□□□□ -2.01
SSX4O60224 RNU6-1245P-201ENST00000411130 106 ntBASIC2.47□□□□□ -2.01
SSX4O60224 VN1R36P-201ENST00000414936 291 ntBASIC2.47□□□□□ -2.01
SSX4O60224 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.47□□□□□ -2.01
SSX4O60224 MTCO2P3-201ENST00000442543 421 ntBASIC2.47□□□□□ -2.01
SSX4O60224 AP000852.1-201ENST00000472460 573 ntBASIC2.47□□□□□ -2.01
SSX4O60224 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.47□□□□□ -2.01
SSX4O60224 AC092436.3-201ENST00000511788 257 ntBASIC2.47□□□□□ -2.01
SSX4O60224 MIR5194-201ENST00000582634 120 ntBASIC2.47□□□□□ -2.01
SSX4O60224 AC018638.8-201ENST00000588755 281 ntBASIC2.47□□□□□ -2.01
SSX4O60224 BNIP3P16-201ENST00000589779 534 ntBASIC2.47□□□□□ -2.01
SSX4O60224 BNIP3P10-201ENST00000605360 577 ntBASIC2.47□□□□□ -2.01
SSX4O60224 AL137847.3-201ENST00000611521 109 ntBASIC2.47□□□□□ -2.01
SSX4O60224 AC024581.2-201ENST00000619986 252 ntBASIC2.47□□□□□ -2.01
SSX4O60224 AL136221.1-201ENST00000621449 509 ntBASIC2.47□□□□□ -2.01
SSX4O60224 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
SSX4O60224 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.46□□□□□ -2.01
SSX4O60224 OR56A5-201ENST00000340110 738 ntBASIC2.46□□□□□ -2.02
SSX4O60224 RNU6-529P-201ENST00000363383 104 ntBASIC2.46□□□□□ -2.02
SSX4O60224 SNORA9.2-201ENST00000365361 133 ntBASIC2.46□□□□□ -2.02
SSX4O60224 MIR196B-201ENST00000384852 84 ntBASIC2.46□□□□□ -2.02
SSX4O60224 MIR512-1-201ENST00000384913 84 ntBASIC2.46□□□□□ -2.02
SSX4O60224 RNU6-1106P-201ENST00000390845 107 ntBASIC2.46□□□□□ -2.02
SSX4O60224 RNU6-220P-201ENST00000390919 107 ntBASIC2.46□□□□□ -2.02
SSX4O60224 U6atac.2-201ENST00000408644 118 ntBASIC2.46□□□□□ -2.02
SSX4O60224 MTND1P23-201ENST00000416931 372 ntBASIC2.46□□□□□ -2.02
SSX4O60224 AL139413.1-201ENST00000421309 217 ntBASIC2.46□□□□□ -2.02
SSX4O60224 MTCO3P18-201ENST00000440206 761 ntBASIC2.46□□□□□ -2.02
SSX4O60224 RPL7P12-201ENST00000446719 750 ntBASIC2.46□□□□□ -2.02
SSX4O60224 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.46□□□□□ -2.02
SSX4O60224 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.46□□□□□ -2.02
SSX4O60224 RN7SL429P-201ENST00000479090 223 ntBASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms