Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
MSI1O43347 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.96□□□□□ -1.94
MSI1O43347 AC009314.1-201ENST00000603871 304 ntBASIC2.96□□□□□ -1.94
MSI1O43347 AC018462.2-201ENST00000605375 395 ntBASIC2.96□□□□□ -1.94
MSI1O43347 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.96□□□□□ -1.94
MSI1O43347 MIR7106-201ENST00000612419 65 ntBASIC2.96□□□□□ -1.94
MSI1O43347 AC084781.2-201ENST00000615568 161 ntBASIC2.96□□□□□ -1.94
MSI1O43347 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.96□□□□□ -1.94
MSI1O43347 AL669831.3-213ENST00000636676 183 ntBASIC2.96□□□□□ -1.94
MSI1O43347 AC096644.4-201ENST00000563417 2912 ntBASIC2.96□□□□□ -1.94
MSI1O43347 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
MSI1O43347 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
MSI1O43347 RNU1-35P-201ENST00000362782 153 ntBASIC2.95□□□□□ -1.94
MSI1O43347 RNA5SP126-201ENST00000365092 109 ntBASIC2.95□□□□□ -1.94
MSI1O43347 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.95□□□□□ -1.94
MSI1O43347 Y_RNA.431-201ENST00000384086 102 ntBASIC2.95□□□□□ -1.94
MSI1O43347 RNU6-43P-201ENST00000384302 107 ntBASIC2.95□□□□□ -1.94
MSI1O43347 MIR517A-201ENST00000385001 87 ntBASIC2.95□□□□□ -1.94
MSI1O43347 Y_RNA.579-201ENST00000390939 94 ntBASIC2.95□□□□□ -1.94
MSI1O43347 MTCYBP4-201ENST00000401524 249 ntBASIC2.95□□□□□ -1.94
MSI1O43347 Y_RNA.594-201ENST00000410373 140 ntBASIC2.95□□□□□ -1.94
MSI1O43347 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.95□□□□□ -1.94
MSI1O43347 MTCO2P27-201ENST00000420740 428 ntBASIC2.95□□□□□ -1.94
MSI1O43347 SAR1AP4-201ENST00000429225 591 ntBASIC2.95□□□□□ -1.94
MSI1O43347 USP9YP30-201ENST00000430729 455 ntBASIC2.95□□□□□ -1.94
MSI1O43347 AC128713.1-201ENST00000471495 306 ntBASIC2.95□□□□□ -1.94
MSI1O43347 AC018437.1-201ENST00000492214 406 ntBASIC2.95□□□□□ -1.94
MSI1O43347 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.95□□□□□ -1.94
MSI1O43347 MTCYBP40-201ENST00000509390 1135 ntBASIC2.95□□□□□ -1.94
MSI1O43347 AC005741.1-201ENST00000511094 432 ntBASIC2.95□□□□□ -1.94
MSI1O43347 PTP4A1P4-201ENST00000512479 322 ntBASIC2.95□□□□□ -1.94
MSI1O43347 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.95□□□□□ -1.94
MSI1O43347 RNU6-581P-201ENST00000516214 105 ntBASIC2.95□□□□□ -1.94
MSI1O43347 Y_RNA.670-201ENST00000516255 105 ntBASIC2.95□□□□□ -1.94
MSI1O43347 SNORA43.2-201ENST00000516652 128 ntBASIC2.95□□□□□ -1.94
MSI1O43347 SNORA31.26-201ENST00000517250 137 ntBASIC2.95□□□□□ -1.94
MSI1O43347 AC109479.2-201ENST00000517842 174 ntBASIC2.95□□□□□ -1.94
MSI1O43347 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
MSI1O43347 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.95□□□□□ -1.94
MSI1O43347 AP004607.1-201ENST00000524456 203 ntBASIC2.95□□□□□ -1.94
MSI1O43347 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.95□□□□□ -1.94
MSI1O43347 AC006199.1-201ENST00000548728 219 ntBASIC2.95□□□□□ -1.94
MSI1O43347 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.95□□□□□ -1.94
MSI1O43347 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.95□□□□□ -1.94
MSI1O43347 CPDP1-201ENST00000579660 283 ntBASIC2.95□□□□□ -1.94
MSI1O43347 AL353621.2-201ENST00000605340 133 ntBASIC2.95□□□□□ -1.94
MSI1O43347 AP000654.2-201ENST00000605633 586 ntBASIC2.95□□□□□ -1.94
MSI1O43347 AC009229.3-201ENST00000608056 282 ntBASIC2.95□□□□□ -1.94
MSI1O43347 AC005046.1-201ENST00000608515 625 ntBASIC2.95□□□□□ -1.94
MSI1O43347 AL133215.3-201ENST00000609801 448 ntBASIC2.95□□□□□ -1.94
MSI1O43347 AC013412.1-201ENST00000610687 192 ntBASIC2.95□□□□□ -1.94
MSI1O43347 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.95□□□□□ -1.94
MSI1O43347 AC090617.7-201ENST00000623952 126 ntBASIC2.95□□□□□ -1.94
MSI1O43347 AC099654.10-201ENST00000640395 161 ntBASIC2.95□□□□□ -1.94
MSI1O43347 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.95□□□□□ -1.94
MSI1O43347 MTND4P23-201ENST00000447723 1363 ntBASIC2.95□□□□□ -1.94
MSI1O43347 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
MSI1O43347 MAPK10-322ENST00000641485 4530 ntBASIC2.94□□□□□ -1.94
MSI1O43347 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
MSI1O43347 AC110774.1-201ENST00000623567 2018 ntBASIC2.94□□□□□ -1.94
MSI1O43347 Y_RNA.138-201ENST00000363462 102 ntBASIC2.94□□□□□ -1.94
MSI1O43347 RNU6-336P-201ENST00000364891 107 ntBASIC2.94□□□□□ -1.94
MSI1O43347 Y_RNA.404-201ENST00000383978 102 ntBASIC2.94□□□□□ -1.94
MSI1O43347 RNU6-310P-201ENST00000384655 107 ntBASIC2.94□□□□□ -1.94
MSI1O43347 MIR181A2-201ENST00000384863 110 ntBASIC2.94□□□□□ -1.94
MSI1O43347 RNU6-1050P-201ENST00000410388 107 ntBASIC2.94□□□□□ -1.94
MSI1O43347 Y_RNA.646-201ENST00000410980 101 ntBASIC2.94□□□□□ -1.94
MSI1O43347 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.94□□□□□ -1.94
MSI1O43347 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.94□□□□□ -1.94
MSI1O43347 AL133396.1-201ENST00000432048 687 ntBASIC2.94□□□□□ -1.94
MSI1O43347 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.94□□□□□ -1.94
MSI1O43347 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.94□□□□□ -1.94
MSI1O43347 MTCO3P10-201ENST00000455912 772 ntBASIC2.94□□□□□ -1.94
MSI1O43347 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.94□□□□□ -1.94
MSI1O43347 SNORD5.1-201ENST00000458800 75 ntBASIC2.94□□□□□ -1.94
MSI1O43347 RNU7-23P-201ENST00000459465 62 ntBASIC2.94□□□□□ -1.94
MSI1O43347 RNU6-1037P-201ENST00000459571 107 ntBASIC2.94□□□□□ -1.94
MSI1O43347 RPS26P21-201ENST00000475397 348 ntBASIC2.94□□□□□ -1.94
MSI1O43347 AP004217.1-201ENST00000480579 346 ntBASIC2.94□□□□□ -1.94
MSI1O43347 RPL7P42-201ENST00000481005 679 ntBASIC2.94□□□□□ -1.94
MSI1O43347 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.94□□□□□ -1.94
MSI1O43347 RNA5SP367-201ENST00000516557 118 ntBASIC2.94□□□□□ -1.94
MSI1O43347 NACAP3-201ENST00000552100 481 ntBASIC2.94□□□□□ -1.94
MSI1O43347 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.94□□□□□ -1.94
MSI1O43347 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.94□□□□□ -1.94
MSI1O43347 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
MSI1O43347 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
MSI1O43347 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
MSI1O43347 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
MSI1O43347 RNU6-1317P-201ENST00000364582 104 ntBASIC2.93□□□□□ -1.94
MSI1O43347 Y_RNA.315-201ENST00000365117 102 ntBASIC2.93□□□□□ -1.94
MSI1O43347 RNU6-842P-201ENST00000384269 107 ntBASIC2.93□□□□□ -1.94
MSI1O43347 RNU6-1011P-201ENST00000384668 107 ntBASIC2.93□□□□□ -1.94
MSI1O43347 MIR512-1-201ENST00000384913 84 ntBASIC2.93□□□□□ -1.94
MSI1O43347 SNORA75.4-201ENST00000391278 119 ntBASIC2.93□□□□□ -1.94
MSI1O43347 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
MSI1O43347 AL139095.1-201ENST00000404326 391 ntBASIC2.93□□□□□ -1.94
MSI1O43347 FTH1P15-201ENST00000406984 280 ntBASIC2.93□□□□□ -1.94
MSI1O43347 RNU6-293P-201ENST00000411259 106 ntBASIC2.93□□□□□ -1.94
MSI1O43347 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms