Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC1.95□□□□□ -2.1
CLDN3O15551 ART2BP-201ENST00000453501 499 ntBASIC1.95□□□□□ -2.1
CLDN3O15551 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC1.95□□□□□ -2.1
CLDN3O15551 MTCYBP40-201ENST00000509390 1135 ntBASIC1.95□□□□□ -2.1
CLDN3O15551 RNU6-1178P-201ENST00000516674 107 ntBASIC1.95□□□□□ -2.1
CLDN3O15551 AP001893.2-201ENST00000526949 202 ntBASIC1.95□□□□□ -2.1
CLDN3O15551 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.95□□□□□ -2.1
CLDN3O15551 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.95□□□□□ -2.1
CLDN3O15551 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC1.95□□□□□ -2.1
CLDN3O15551 ANP32BP3-201ENST00000559213 706 ntBASIC1.95□□□□□ -2.1
CLDN3O15551 DEFB122-202ENST00000569013 197 ntBASIC1.95□□□□□ -2.1
CLDN3O15551 Z84480.1-201ENST00000605131 311 ntBASIC1.95□□□□□ -2.1
CLDN3O15551 AC063943.3-201ENST00000615562 356 ntBASIC1.95□□□□□ -2.1
CLDN3O15551 AC098657.3-201ENST00000620434 263 ntBASIC1.95□□□□□ -2.1
CLDN3O15551 AC084768.2-201ENST00000622736 221 ntBASIC1.95□□□□□ -2.1
CLDN3O15551 AC011155.2-201ENST00000623202 216 ntBASIC1.95□□□□□ -2.1
CLDN3O15551 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
CLDN3O15551 AC009487.4-201ENST00000624969 3585 ntBASIC1.95□□□□□ -2.1
CLDN3O15551 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
CLDN3O15551 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
CLDN3O15551 MIR544A-201ENST00000384855 91 ntBASIC1.94□□□□□ -2.1
CLDN3O15551 MIR1262-201ENST00000408276 93 ntBASIC1.94□□□□□ -2.1
CLDN3O15551 RNU2-3P-201ENST00000410144 191 ntBASIC1.94□□□□□ -2.1
CLDN3O15551 AL030996.1-201ENST00000411430 235 ntBASIC1.94□□□□□ -2.1
CLDN3O15551 AL158823.1-201ENST00000418441 478 ntBASIC1.94□□□□□ -2.1
CLDN3O15551 MTND2P4-201ENST00000445034 1004 ntBASIC1.94□□□□□ -2.1
CLDN3O15551 AL122001.1-201ENST00000457027 370 ntBASIC1.94□□□□□ -2.1
CLDN3O15551 AL162395.1-201ENST00000457882 422 ntBASIC1.94□□□□□ -2.1
CLDN3O15551 snoU13.23-201ENST00000458863 104 ntBASIC1.94□□□□□ -2.1
CLDN3O15551 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.94□□□□□ -2.1
CLDN3O15551 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.94□□□□□ -2.1
CLDN3O15551 RPL30P1-201ENST00000488676 339 ntBASIC1.94□□□□□ -2.1
CLDN3O15551 MTCYBP35-201ENST00000503630 1137 ntBASIC1.94□□□□□ -2.1
CLDN3O15551 AC104136.1-201ENST00000512969 394 ntBASIC1.94□□□□□ -2.1
CLDN3O15551 AC117532.1-201ENST00000514638 323 ntBASIC1.94□□□□□ -2.1
CLDN3O15551 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC1.94□□□□□ -2.1
CLDN3O15551 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.94□□□□□ -2.1
CLDN3O15551 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC1.94□□□□□ -2.1
CLDN3O15551 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC1.94□□□□□ -2.1
CLDN3O15551 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.94□□□□□ -2.1
CLDN3O15551 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC1.94□□□□□ -2.1
CLDN3O15551 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.94□□□□□ -2.1
CLDN3O15551 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.94□□□□□ -2.1
CLDN3O15551 AC091135.1-201ENST00000585943 307 ntBASIC1.94□□□□□ -2.1
CLDN3O15551 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.94□□□□□ -2.1
CLDN3O15551 AC023510.2-201ENST00000622162 746 ntBASIC1.94□□□□□ -2.1
CLDN3O15551 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.94□□□□□ -2.1
CLDN3O15551 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.93□□□□□ -2.1
CLDN3O15551 Y_RNA.597-201ENST00000410463 100 ntBASIC1.93□□□□□ -2.1
CLDN3O15551 CYCSP49-201ENST00000420810 319 ntBASIC1.93□□□□□ -2.1
CLDN3O15551 BX510359.4-201ENST00000423750 193 ntBASIC1.93□□□□□ -2.1
CLDN3O15551 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.93□□□□□ -2.1
CLDN3O15551 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.93□□□□□ -2.1
CLDN3O15551 AL022238.1-201ENST00000442557 355 ntBASIC1.93□□□□□ -2.1
CLDN3O15551 AC079448.1-201ENST00000449377 373 ntBASIC1.93□□□□□ -2.1
CLDN3O15551 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.93□□□□□ -2.1
CLDN3O15551 SNRPGP9-201ENST00000456025 225 ntBASIC1.93□□□□□ -2.1
CLDN3O15551 RNU7-182P-201ENST00000459009 62 ntBASIC1.93□□□□□ -2.1
CLDN3O15551 PTP4A1P4-201ENST00000512479 322 ntBASIC1.93□□□□□ -2.1
CLDN3O15551 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.93□□□□□ -2.1
CLDN3O15551 RNA5SP503-201ENST00000517047 117 ntBASIC1.93□□□□□ -2.1
CLDN3O15551 RNU6-548P-201ENST00000517083 115 ntBASIC1.93□□□□□ -2.1
CLDN3O15551 AP005660.1-201ENST00000522972 293 ntBASIC1.93□□□□□ -2.1
CLDN3O15551 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.93□□□□□ -2.1
CLDN3O15551 MIR4419B-201ENST00000577260 68 ntBASIC1.93□□□□□ -2.1
CLDN3O15551 AL136363.2-201ENST00000604173 851 ntBASIC1.93□□□□□ -2.1
CLDN3O15551 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.93□□□□□ -2.1
CLDN3O15551 AL773524.1-201ENST00000614065 229 ntBASIC1.93□□□□□ -2.1
CLDN3O15551 AL132822.1-201ENST00000617063 513 ntBASIC1.93□□□□□ -2.1
CLDN3O15551 AL159153.1-201ENST00000619688 317 ntBASIC1.93□□□□□ -2.1
CLDN3O15551 AC091931.1-201ENST00000623488 728 ntBASIC1.93□□□□□ -2.1
CLDN3O15551 SEPT14P19-203ENST00000633205 211 ntBASIC1.93□□□□□ -2.1
CLDN3O15551 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.93□□□□□ -2.1
CLDN3O15551 SNORD14D-201ENST00000384390 87 ntBASIC1.92□□□□□ -2.1
CLDN3O15551 MIR1-2-201ENST00000384961 85 ntBASIC1.92□□□□□ -2.1
CLDN3O15551 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
CLDN3O15551 MIR764-201ENST00000390811 85 ntBASIC1.92□□□□□ -2.1
CLDN3O15551 RNU11-3P-201ENST00000391111 133 ntBASIC1.92□□□□□ -2.1
CLDN3O15551 AL356432.1-201ENST00000405809 419 ntBASIC1.92□□□□□ -2.1
CLDN3O15551 RNU6-1245P-201ENST00000411130 106 ntBASIC1.92□□□□□ -2.1
CLDN3O15551 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC1.92□□□□□ -2.1
CLDN3O15551 CYCSP33-201ENST00000414485 327 ntBASIC1.92□□□□□ -2.1
CLDN3O15551 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.92□□□□□ -2.1
CLDN3O15551 RPS15AP10-201ENST00000432472 382 ntBASIC1.92□□□□□ -2.1
CLDN3O15551 AL645568.3-201ENST00000433683 316 ntBASIC1.92□□□□□ -2.1
CLDN3O15551 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.92□□□□□ -2.1
CLDN3O15551 AC007969.2-201ENST00000441891 191 ntBASIC1.92□□□□□ -2.1
CLDN3O15551 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC1.92□□□□□ -2.1
CLDN3O15551 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC1.92□□□□□ -2.1
CLDN3O15551 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.92□□□□□ -2.1
CLDN3O15551 SNORA18.6-201ENST00000516792 115 ntBASIC1.92□□□□□ -2.1
CLDN3O15551 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.92□□□□□ -2.1
CLDN3O15551 AL603755.1-201ENST00000619504 163 ntBASIC1.92□□□□□ -2.1
CLDN3O15551 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
CLDN3O15551 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.91□□□□□ -2.1
CLDN3O15551 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
CLDN3O15551 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
CLDN3O15551 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.91□□□□□ -2.1
CLDN3O15551 RNU6-37P-201ENST00000362692 107 ntBASIC1.91□□□□□ -2.1
CLDN3O15551 RNU4-21P-201ENST00000362802 126 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms