Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 RNU6-1060P-201ENST00000384664 107 ntBASIC2.17□□□□□ -2.06
CDX4O14627 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
CDX4O14627 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
CDX4O14627 RNU2-49P-201ENST00000410666 184 ntBASIC2.17□□□□□ -2.06
CDX4O14627 AC023141.4-201ENST00000412031 328 ntBASIC2.17□□□□□ -2.06
CDX4O14627 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.17□□□□□ -2.06
CDX4O14627 HMGN2P10-201ENST00000448085 265 ntBASIC2.17□□□□□ -2.06
CDX4O14627 MTND3P16-201ENST00000452205 344 ntBASIC2.17□□□□□ -2.06
CDX4O14627 RN7SKP210-201ENST00000459176 261 ntBASIC2.17□□□□□ -2.06
CDX4O14627 AC132942.1-201ENST00000486753 483 ntBASIC2.17□□□□□ -2.06
CDX4O14627 RPL38P4-201ENST00000502376 214 ntBASIC2.17□□□□□ -2.06
CDX4O14627 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.17□□□□□ -2.06
CDX4O14627 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.17□□□□□ -2.06
CDX4O14627 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.17□□□□□ -2.06
CDX4O14627 SNORD60.2-201ENST00000516883 86 ntBASIC2.17□□□□□ -2.06
CDX4O14627 AC009902.1-201ENST00000519351 183 ntBASIC2.17□□□□□ -2.06
CDX4O14627 AC025755.1-201ENST00000521306 278 ntBASIC2.17□□□□□ -2.06
CDX4O14627 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
CDX4O14627 AC021739.1-201ENST00000559631 174 ntBASIC2.17□□□□□ -2.06
CDX4O14627 LINC00933-203ENST00000559812 219 ntBASIC2.17□□□□□ -2.06
CDX4O14627 AL138976.2-201ENST00000563989 694 ntBASIC2.17□□□□□ -2.06
CDX4O14627 MIR5583-1-201ENST00000580941 59 ntBASIC2.17□□□□□ -2.06
CDX4O14627 AL645944.1-201ENST00000603857 493 ntBASIC2.17□□□□□ -2.06
CDX4O14627 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
CDX4O14627 AC100810.6-201ENST00000638068 285 ntBASIC2.17□□□□□ -2.06
CDX4O14627 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.17□□□□□ -2.06
CDX4O14627 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
CDX4O14627 AL139276.1-201ENST00000311910 1001 ntBASIC2.16□□□□□ -2.06
CDX4O14627 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
CDX4O14627 RNU6-461P-201ENST00000364195 107 ntBASIC2.16□□□□□ -2.06
CDX4O14627 RNU6-116P-201ENST00000384042 109 ntBASIC2.16□□□□□ -2.06
CDX4O14627 SNORA40C-201ENST00000391285 128 ntBASIC2.16□□□□□ -2.06
CDX4O14627 AL606923.1-201ENST00000406616 190 ntBASIC2.16□□□□□ -2.06
CDX4O14627 RNU2-29P-201ENST00000410423 189 ntBASIC2.16□□□□□ -2.06
CDX4O14627 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC2.16□□□□□ -2.06
CDX4O14627 RPL21P111-201ENST00000418453 477 ntBASIC2.16□□□□□ -2.06
CDX4O14627 AL121601.2-201ENST00000438019 707 ntBASIC2.16□□□□□ -2.06
CDX4O14627 CALM1P1-201ENST00000442082 433 ntBASIC2.16□□□□□ -2.06
CDX4O14627 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.16□□□□□ -2.06
CDX4O14627 OSTCP8-201ENST00000445117 448 ntBASIC2.16□□□□□ -2.06
CDX4O14627 MTND5P20-201ENST00000448677 143 ntBASIC2.16□□□□□ -2.06
CDX4O14627 BTF3P15-201ENST00000455606 336 ntBASIC2.16□□□□□ -2.06
CDX4O14627 HMGB1P30-201ENST00000492455 606 ntBASIC2.16□□□□□ -2.06
CDX4O14627 MTCO2P30-201ENST00000503662 364 ntBASIC2.16□□□□□ -2.06
CDX4O14627 MTCO3P9-201ENST00000506989 781 ntBASIC2.16□□□□□ -2.06
CDX4O14627 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.16□□□□□ -2.06
CDX4O14627 AC108729.3-201ENST00000513484 108 ntBASIC2.16□□□□□ -2.06
CDX4O14627 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.16□□□□□ -2.06
CDX4O14627 RNU6-1053P-201ENST00000515930 101 ntBASIC2.16□□□□□ -2.06
CDX4O14627 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.16□□□□□ -2.06
CDX4O14627 RNU6-1038P-201ENST00000516516 104 ntBASIC2.16□□□□□ -2.06
CDX4O14627 RNU6-826P-201ENST00000516827 104 ntBASIC2.16□□□□□ -2.06
CDX4O14627 Y_RNA.702-201ENST00000516843 96 ntBASIC2.16□□□□□ -2.06
CDX4O14627 CENPUP1-201ENST00000526649 1202 ntBASIC2.16□□□□□ -2.06
CDX4O14627 COX6CP5-201ENST00000527162 228 ntBASIC2.16□□□□□ -2.06
CDX4O14627 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.16□□□□□ -2.06
CDX4O14627 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.16□□□□□ -2.06
CDX4O14627 AC105137.2-201ENST00000569073 466 ntBASIC2.16□□□□□ -2.06
CDX4O14627 AC009994.1-201ENST00000606889 253 ntBASIC2.16□□□□□ -2.06
CDX4O14627 AC006504.8-201ENST00000621046 635 ntBASIC2.16□□□□□ -2.06
CDX4O14627 AC010889.1-201ENST00000566193 2666 ntBASIC2.16□□□□□ -2.06
CDX4O14627 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.15□□□□□ -2.07
CDX4O14627 RNU4-66P-201ENST00000365199 138 ntBASIC2.15□□□□□ -2.07
CDX4O14627 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
CDX4O14627 RNU6-38P-201ENST00000384085 107 ntBASIC2.15□□□□□ -2.07
CDX4O14627 RNU6-550P-201ENST00000391057 101 ntBASIC2.15□□□□□ -2.07
CDX4O14627 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.15□□□□□ -2.07
CDX4O14627 Y_RNA.615-201ENST00000410769 117 ntBASIC2.15□□□□□ -2.07
CDX4O14627 RNU4-46P-201ENST00000410818 138 ntBASIC2.15□□□□□ -2.07
CDX4O14627 OR6C66P-201ENST00000414917 930 ntBASIC2.15□□□□□ -2.07
CDX4O14627 AL445646.1-201ENST00000431784 216 ntBASIC2.15□□□□□ -2.07
CDX4O14627 USP9YP8-201ENST00000441913 500 ntBASIC2.15□□□□□ -2.07
CDX4O14627 SNRPEP8-201ENST00000442866 260 ntBASIC2.15□□□□□ -2.07
CDX4O14627 AL441985.1-201ENST00000457727 251 ntBASIC2.15□□□□□ -2.07
CDX4O14627 PMCHL2-203ENST00000457791 237 ntBASIC2.15□□□□□ -2.07
CDX4O14627 SNRPFP3-201ENST00000457792 225 ntBASIC2.15□□□□□ -2.07
CDX4O14627 RNU6-333P-201ENST00000459117 107 ntBASIC2.15□□□□□ -2.07
CDX4O14627 RNU7-180P-201ENST00000459240 63 ntBASIC2.15□□□□□ -2.07
CDX4O14627 RN7SL297P-201ENST00000483161 293 ntBASIC2.15□□□□□ -2.07
CDX4O14627 HMGN1P12-201ENST00000499125 195 ntBASIC2.15□□□□□ -2.07
CDX4O14627 AC091951.2-201ENST00000500762 203 ntBASIC2.15□□□□□ -2.07
CDX4O14627 AC098591.2-201ENST00000510152 315 ntBASIC2.15□□□□□ -2.07
CDX4O14627 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.15□□□□□ -2.07
CDX4O14627 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.15□□□□□ -2.07
CDX4O14627 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
CDX4O14627 AC023050.3-201ENST00000541142 333 ntBASIC2.15□□□□□ -2.07
CDX4O14627 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.15□□□□□ -2.07
CDX4O14627 AC006199.1-201ENST00000548728 219 ntBASIC2.15□□□□□ -2.07
CDX4O14627 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
CDX4O14627 MIR4424-201ENST00000585257 86 ntBASIC2.15□□□□□ -2.07
CDX4O14627 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.15□□□□□ -2.07
CDX4O14627 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.15□□□□□ -2.07
CDX4O14627 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.15□□□□□ -2.07
CDX4O14627 AL357078.3-201ENST00000607528 618 ntBASIC2.15□□□□□ -2.07
CDX4O14627 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.15□□□□□ -2.07
CDX4O14627 MIR6845-201ENST00000613182 61 ntBASIC2.15□□□□□ -2.07
CDX4O14627 AC104260.1-201ENST00000616660 539 ntBASIC2.15□□□□□ -2.07
CDX4O14627 MIR6134-201ENST00000617606 109 ntBASIC2.15□□□□□ -2.07
CDX4O14627 MIR6766-201ENST00000622641 72 ntBASIC2.15□□□□□ -2.07
CDX4O14627 AC090617.10-201ENST00000624308 134 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms