Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 RNY4P36-201ENST00000391116 96 ntBASIC3.24□□□□□ -1.89
FOXN3O00409 FO393413.1-201ENST00000402892 195 ntBASIC3.24□□□□□ -1.89
FOXN3O00409 RNA5SP274-201ENST00000410484 108 ntBASIC3.24□□□□□ -1.89
FOXN3O00409 RNU6-325P-201ENST00000411132 105 ntBASIC3.24□□□□□ -1.89
FOXN3O00409 RNA5SP492-201ENST00000411330 114 ntBASIC3.24□□□□□ -1.89
FOXN3O00409 RPL37P10-201ENST00000412884 288 ntBASIC3.24□□□□□ -1.89
FOXN3O00409 AL513477.1-202ENST00000417061 214 ntBASIC3.24□□□□□ -1.89
FOXN3O00409 MTCO2P27-201ENST00000420740 428 ntBASIC3.24□□□□□ -1.89
FOXN3O00409 RPL21P2-201ENST00000440049 481 ntBASIC3.24□□□□□ -1.89
FOXN3O00409 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC3.24□□□□□ -1.89
FOXN3O00409 RN7SL807P-201ENST00000470923 297 ntBASIC3.24□□□□□ -1.89
FOXN3O00409 RPL31P41-201ENST00000477967 372 ntBASIC3.24□□□□□ -1.89
FOXN3O00409 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.24□□□□□ -1.89
FOXN3O00409 MTCYBP40-201ENST00000509390 1135 ntBASIC3.24□□□□□ -1.89
FOXN3O00409 SCARNA17.1-201ENST00000516211 143 ntBASIC3.24□□□□□ -1.89
FOXN3O00409 SCARNA17.2-201ENST00000516334 143 ntBASIC3.24□□□□□ -1.89
FOXN3O00409 RNU6-1213P-201ENST00000517075 94 ntBASIC3.24□□□□□ -1.89
FOXN3O00409 APOOP3-201ENST00000536787 586 ntBASIC3.24□□□□□ -1.89
FOXN3O00409 TRAV32-201ENST00000553993 340 ntBASIC3.24□□□□□ -1.89
FOXN3O00409 MTCO3P13-201ENST00000577757 781 ntBASIC3.24□□□□□ -1.89
FOXN3O00409 MIR3171-201ENST00000584270 74 ntBASIC3.24□□□□□ -1.89
FOXN3O00409 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.24□□□□□ -1.89
FOXN3O00409 AC010620.2-201ENST00000600135 313 ntBASIC3.24□□□□□ -1.89
FOXN3O00409 AL391813.1-201ENST00000603098 260 ntBASIC3.24□□□□□ -1.89
FOXN3O00409 AC007179.3-201ENST00000604976 235 ntBASIC3.24□□□□□ -1.89
FOXN3O00409 AC124303.1-201ENST00000605703 360 ntBASIC3.24□□□□□ -1.89
FOXN3O00409 SCARNA17.4-201ENST00000614296 143 ntBASIC3.24□□□□□ -1.89
FOXN3O00409 MIR3529-201ENST00000637713 78 ntBASIC3.24□□□□□ -1.89
FOXN3O00409 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
FOXN3O00409 MTND5P1-201ENST00000445440 1375 ntBASIC3.24□□□□□ -1.89
FOXN3O00409 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.24□□□□□ -1.89
FOXN3O00409 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
FOXN3O00409 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.23□□□□□ -1.89
FOXN3O00409 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
FOXN3O00409 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
FOXN3O00409 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
FOXN3O00409 RPL9P7-201ENST00000330965 580 ntBASIC3.23□□□□□ -1.89
FOXN3O00409 Y_RNA.315-201ENST00000365117 102 ntBASIC3.23□□□□□ -1.89
FOXN3O00409 Y_RNA.473-201ENST00000384333 102 ntBASIC3.23□□□□□ -1.89
FOXN3O00409 SNORA26.7-201ENST00000391288 122 ntBASIC3.23□□□□□ -1.89
FOXN3O00409 MIR548P-201ENST00000408336 84 ntBASIC3.23□□□□□ -1.89
FOXN3O00409 AC074085.1-201ENST00000413598 418 ntBASIC3.23□□□□□ -1.89
FOXN3O00409 AC074117.2-201ENST00000417130 397 ntBASIC3.23□□□□□ -1.89
FOXN3O00409 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC3.23□□□□□ -1.89
FOXN3O00409 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.23□□□□□ -1.89
FOXN3O00409 Z98742.2-201ENST00000431564 187 ntBASIC3.23□□□□□ -1.89
FOXN3O00409 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.23□□□□□ -1.89
FOXN3O00409 AC004383.1-201ENST00000438135 289 ntBASIC3.23□□□□□ -1.89
FOXN3O00409 AC009969.1-201ENST00000438726 172 ntBASIC3.23□□□□□ -1.89
FOXN3O00409 AL513043.1-201ENST00000439124 535 ntBASIC3.23□□□□□ -1.89
FOXN3O00409 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.23□□□□□ -1.89
FOXN3O00409 AC124916.1-201ENST00000444020 547 ntBASIC3.23□□□□□ -1.89
FOXN3O00409 BX510359.1-201ENST00000456973 237 ntBASIC3.23□□□□□ -1.89
FOXN3O00409 RPL9P9-202ENST00000466501 579 ntBASIC3.23□□□□□ -1.89
FOXN3O00409 RN7SL633P-201ENST00000488974 297 ntBASIC3.23□□□□□ -1.89
FOXN3O00409 AC096576.1-201ENST00000489014 359 ntBASIC3.23□□□□□ -1.89
FOXN3O00409 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.23□□□□□ -1.89
FOXN3O00409 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.23□□□□□ -1.89
FOXN3O00409 HSPE1P20-201ENST00000538133 289 ntBASIC3.23□□□□□ -1.89
FOXN3O00409 CR383656.8-201ENST00000549046 145 ntBASIC3.23□□□□□ -1.89
FOXN3O00409 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
FOXN3O00409 MTND4P27-201ENST00000450813 1354 ntBASIC3.23□□□□□ -1.89
FOXN3O00409 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
FOXN3O00409 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.22□□□□□ -1.89
FOXN3O00409 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.22□□□□□ -1.89
FOXN3O00409 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
FOXN3O00409 RNU6-748P-201ENST00000384648 107 ntBASIC3.22□□□□□ -1.89
FOXN3O00409 MIR521-1-201ENST00000384902 87 ntBASIC3.22□□□□□ -1.89
FOXN3O00409 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.22□□□□□ -1.89
FOXN3O00409 RN7SKP158-201ENST00000410453 326 ntBASIC3.22□□□□□ -1.89
FOXN3O00409 AL030996.1-201ENST00000411430 235 ntBASIC3.22□□□□□ -1.89
FOXN3O00409 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.22□□□□□ -1.89
FOXN3O00409 MTND3P9-201ENST00000429526 346 ntBASIC3.22□□□□□ -1.89
FOXN3O00409 AL645568.3-201ENST00000433683 316 ntBASIC3.22□□□□□ -1.89
FOXN3O00409 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.22□□□□□ -1.89
FOXN3O00409 OSTCP8-201ENST00000445117 448 ntBASIC3.22□□□□□ -1.89
FOXN3O00409 MTND1P17-201ENST00000448961 204 ntBASIC3.22□□□□□ -1.89
FOXN3O00409 RPL30P15-201ENST00000457129 321 ntBASIC3.22□□□□□ -1.89
FOXN3O00409 RPL30P12-201ENST00000474666 353 ntBASIC3.22□□□□□ -1.89
FOXN3O00409 AC006445.1-201ENST00000491925 405 ntBASIC3.22□□□□□ -1.89
FOXN3O00409 MTND5P5-201ENST00000503764 376 ntBASIC3.22□□□□□ -1.89
FOXN3O00409 AC008885.1-201ENST00000514930 301 ntBASIC3.22□□□□□ -1.89
FOXN3O00409 RNU6-1170P-201ENST00000515974 106 ntBASIC3.22□□□□□ -1.89
FOXN3O00409 RNU6-327P-201ENST00000516270 127 ntBASIC3.22□□□□□ -1.89
FOXN3O00409 AC007536.1-201ENST00000533382 349 ntBASIC3.22□□□□□ -1.89
FOXN3O00409 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
FOXN3O00409 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.22□□□□□ -1.89
FOXN3O00409 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
FOXN3O00409 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
FOXN3O00409 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.22□□□□□ -1.89
FOXN3O00409 AC026241.1-201ENST00000517873 2142 ntBASIC3.22□□□□□ -1.89
FOXN3O00409 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.89
FOXN3O00409 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
FOXN3O00409 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
FOXN3O00409 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
FOXN3O00409 Y_RNA.445-201ENST00000384168 102 ntBASIC3.21□□□□□ -1.9
FOXN3O00409 MTND4P19-201ENST00000446659 478 ntBASIC3.21□□□□□ -1.9
FOXN3O00409 AC112771.1-201ENST00000463581 102 ntBASIC3.21□□□□□ -1.9
FOXN3O00409 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC3.21□□□□□ -1.9
FOXN3O00409 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms