Protein–RNA interactions for Protein: O00273

DFFA, DNA fragmentation factor subunit alpha, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DFFAO00273 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.39□□□□□ -2.19
DFFAO00273 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC1.39□□□□□ -2.19
DFFAO00273 AC026585.1-201ENST00000619582 524 ntBASIC1.39□□□□□ -2.19
DFFAO00273 RMST_7.1-201ENST00000621935 268 ntBASIC1.39□□□□□ -2.19
DFFAO00273 MIR1248-201ENST00000629190 106 ntBASIC1.39□□□□□ -2.19
DFFAO00273 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.39□□□□□ -2.19
DFFAO00273 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.39□□□□□ -2.19
DFFAO00273 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.39□□□□□ -2.19
DFFAO00273 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
DFFAO00273 RNU1-62P-201ENST00000362599 164 ntBASIC1.38□□□□□ -2.19
DFFAO00273 RNU6-78P-201ENST00000362897 107 ntBASIC1.38□□□□□ -2.19
DFFAO00273 RNU6-501P-201ENST00000364072 100 ntBASIC1.38□□□□□ -2.19
DFFAO00273 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
DFFAO00273 SNORA48.1-201ENST00000390879 135 ntBASIC1.38□□□□□ -2.19
DFFAO00273 MTCYBP36-201ENST00000404146 440 ntBASIC1.38□□□□□ -2.19
DFFAO00273 RAP1BP3-201ENST00000407180 549 ntBASIC1.38□□□□□ -2.19
DFFAO00273 RNU2-39P-201ENST00000410604 198 ntBASIC1.38□□□□□ -2.19
DFFAO00273 Y_RNA.608-201ENST00000410647 95 ntBASIC1.38□□□□□ -2.19
DFFAO00273 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.38□□□□□ -2.19
DFFAO00273 MED13P1-201ENST00000428342 171 ntBASIC1.38□□□□□ -2.19
DFFAO00273 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.38□□□□□ -2.19
DFFAO00273 AC009474.2-201ENST00000451383 136 ntBASIC1.38□□□□□ -2.19
DFFAO00273 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC1.38□□□□□ -2.19
DFFAO00273 AF131216.2-201ENST00000512316 564 ntBASIC1.38□□□□□ -2.19
DFFAO00273 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.38□□□□□ -2.19
DFFAO00273 COPS8P3-201ENST00000526024 482 ntBASIC1.38□□□□□ -2.19
DFFAO00273 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC1.38□□□□□ -2.19
DFFAO00273 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.38□□□□□ -2.19
DFFAO00273 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.38□□□□□ -2.19
DFFAO00273 ZNF680P1-201ENST00000436625 1469 ntBASIC1.37□□□□□ -2.19
DFFAO00273 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.37□□□□□ -2.19
DFFAO00273 CBX3P1-201ENST00000325243 554 ntBASIC1.37□□□□□ -2.19
DFFAO00273 RNU6-371P-201ENST00000364283 108 ntBASIC1.37□□□□□ -2.19
DFFAO00273 RNU6-338P-201ENST00000383888 105 ntBASIC1.37□□□□□ -2.19
DFFAO00273 RNU6-925P-201ENST00000384629 104 ntBASIC1.37□□□□□ -2.19
DFFAO00273 MIR30A-201ENST00000385092 71 ntBASIC1.37□□□□□ -2.19
DFFAO00273 BTF3P4-201ENST00000418852 495 ntBASIC1.37□□□□□ -2.19
DFFAO00273 AL365184.2-201ENST00000431139 435 ntBASIC1.37□□□□□ -2.19
DFFAO00273 AC007969.2-201ENST00000441891 191 ntBASIC1.37□□□□□ -2.19
DFFAO00273 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.37□□□□□ -2.19
DFFAO00273 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.37□□□□□ -2.19
DFFAO00273 MTND3P3-201ENST00000505004 126 ntBASIC1.37□□□□□ -2.19
DFFAO00273 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.37□□□□□ -2.19
DFFAO00273 MTND2P33-201ENST00000506452 1031 ntBASIC1.37□□□□□ -2.19
DFFAO00273 RBBP4P6-201ENST00000508098 202 ntBASIC1.37□□□□□ -2.19
DFFAO00273 AC117522.1-201ENST00000509821 380 ntBASIC1.37□□□□□ -2.19
DFFAO00273 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.37□□□□□ -2.19
DFFAO00273 RNU6-991P-201ENST00000516168 107 ntBASIC1.37□□□□□ -2.19
DFFAO00273 RNU6-311P-201ENST00000516224 102 ntBASIC1.37□□□□□ -2.19
DFFAO00273 SNORA44.1-201ENST00000517031 108 ntBASIC1.37□□□□□ -2.19
DFFAO00273 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.37□□□□□ -2.19
DFFAO00273 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.37□□□□□ -2.19
DFFAO00273 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.37□□□□□ -2.19
DFFAO00273 AC137800.2-201ENST00000574375 120 ntBASIC1.37□□□□□ -2.19
DFFAO00273 MIR5697-201ENST00000578045 78 ntBASIC1.37□□□□□ -2.19
DFFAO00273 MIR4421-201ENST00000578133 69 ntBASIC1.37□□□□□ -2.19
DFFAO00273 AC008521.1-201ENST00000587471 187 ntBASIC1.37□□□□□ -2.19
DFFAO00273 AC022022.2-201ENST00000602989 360 ntBASIC1.37□□□□□ -2.19
DFFAO00273 AP000942.3-201ENST00000603702 160 ntBASIC1.37□□□□□ -2.19
DFFAO00273 AC010900.2-201ENST00000604508 210 ntBASIC1.37□□□□□ -2.19
DFFAO00273 TUSC7.1-201ENST00000610969 165 ntBASIC1.37□□□□□ -2.19
DFFAO00273 AC063943.3-201ENST00000615562 356 ntBASIC1.37□□□□□ -2.19
DFFAO00273 RMST_4.1-201ENST00000616886 107 ntBASIC1.37□□□□□ -2.19
DFFAO00273 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.37□□□□□ -2.19
DFFAO00273 MIR378A-201ENST00000362177 66 ntBASIC1.36□□□□□ -2.19
DFFAO00273 MIR424-201ENST00000362227 98 ntBASIC1.36□□□□□ -2.19
DFFAO00273 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
DFFAO00273 RNU6-641P-201ENST00000384006 107 ntBASIC1.36□□□□□ -2.19
DFFAO00273 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.36□□□□□ -2.19
DFFAO00273 MRPL42P2-201ENST00000403169 426 ntBASIC1.36□□□□□ -2.19
DFFAO00273 RNA5SP100-201ENST00000410903 110 ntBASIC1.36□□□□□ -2.19
DFFAO00273 RNA5SP59-201ENST00000410922 110 ntBASIC1.36□□□□□ -2.19
DFFAO00273 ELOCP4-201ENST00000420090 333 ntBASIC1.36□□□□□ -2.19
DFFAO00273 MTND4P20-201ENST00000424125 869 ntBASIC1.36□□□□□ -2.19
DFFAO00273 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC1.36□□□□□ -2.19
DFFAO00273 AL589872.1-201ENST00000426602 288 ntBASIC1.36□□□□□ -2.19
DFFAO00273 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC1.36□□□□□ -2.19
DFFAO00273 AL035666.1-201ENST00000446195 348 ntBASIC1.36□□□□□ -2.19
DFFAO00273 RPL39P29-201ENST00000447779 157 ntBASIC1.36□□□□□ -2.19
DFFAO00273 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC1.36□□□□□ -2.19
DFFAO00273 RNU1-123P-201ENST00000458950 160 ntBASIC1.36□□□□□ -2.19
DFFAO00273 MTCYBP18-201ENST00000501056 747 ntBASIC1.36□□□□□ -2.19
DFFAO00273 AC114801.2-201ENST00000503825 781 ntBASIC1.36□□□□□ -2.19
DFFAO00273 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.36□□□□□ -2.19
DFFAO00273 AC009646.1-201ENST00000510455 318 ntBASIC1.36□□□□□ -2.19
DFFAO00273 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC1.36□□□□□ -2.19
DFFAO00273 RNVU1-2-201ENST00000516326 135 ntBASIC1.36□□□□□ -2.19
DFFAO00273 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.36□□□□□ -2.19
DFFAO00273 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.36□□□□□ -2.19
DFFAO00273 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC1.36□□□□□ -2.19
DFFAO00273 MTND2P7-201ENST00000521337 640 ntBASIC1.36□□□□□ -2.19
DFFAO00273 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.36□□□□□ -2.19
DFFAO00273 AP003033.1-201ENST00000527244 415 ntBASIC1.36□□□□□ -2.19
DFFAO00273 AC087441.2-201ENST00000529141 262 ntBASIC1.36□□□□□ -2.19
DFFAO00273 AL356057.1-201ENST00000533798 831 ntBASIC1.36□□□□□ -2.19
DFFAO00273 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC1.36□□□□□ -2.19
DFFAO00273 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.36□□□□□ -2.19
DFFAO00273 AC138749.5-201ENST00000611461 208 ntBASIC1.36□□□□□ -2.19
DFFAO00273 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.36□□□□□ -2.19
DFFAO00273 MIR7974-201ENST00000615835 79 ntBASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms