Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 SNORD56.4-201ENST00000363883 71 ntBASIC-0.02□□□□□ -2.41
CHKB-CPT1BH3BT56 RNU6-114P-201ENST00000384704 105 ntBASIC-0.02□□□□□ -2.41
CHKB-CPT1BH3BT56 MTCO1P56-201ENST00000401674 224 ntBASIC-0.02□□□□□ -2.41
CHKB-CPT1BH3BT56 RNU6ATAC20P-201ENST00000408436 127 ntBASIC-0.02□□□□□ -2.41
CHKB-CPT1BH3BT56 COX6CP10-201ENST00000416832 224 ntBASIC-0.02□□□□□ -2.41
CHKB-CPT1BH3BT56 RPS3AP37-201ENST00000419176 745 ntBASIC-0.02□□□□□ -2.41
CHKB-CPT1BH3BT56 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC-0.02□□□□□ -2.41
CHKB-CPT1BH3BT56 VN1R42P-201ENST00000424651 344 ntBASIC-0.02□□□□□ -2.41
CHKB-CPT1BH3BT56 USP9YP14-201ENST00000430663 563 ntBASIC-0.02□□□□□ -2.41
CHKB-CPT1BH3BT56 MTCO3P29-201ENST00000432119 779 ntBASIC-0.02□□□□□ -2.41
CHKB-CPT1BH3BT56 TPTE2P1-204ENST00000435256 593 ntBASIC-0.02□□□□□ -2.41
CHKB-CPT1BH3BT56 LARP1BP3-201ENST00000437229 869 ntBASIC-0.02□□□□□ -2.41
CHKB-CPT1BH3BT56 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC-0.02□□□□□ -2.41
CHKB-CPT1BH3BT56 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC-0.02□□□□□ -2.41
CHKB-CPT1BH3BT56 RNFT1P2-201ENST00000443064 757 ntBASIC-0.02□□□□□ -2.41
CHKB-CPT1BH3BT56 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC-0.02□□□□□ -2.41
CHKB-CPT1BH3BT56 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC-0.02□□□□□ -2.41
CHKB-CPT1BH3BT56 AC091163.3-201ENST00000518269 1144 ntBASIC-0.02□□□□□ -2.41
CHKB-CPT1BH3BT56 MIR4709-201ENST00000577272 72 ntBASIC-0.02□□□□□ -2.41
CHKB-CPT1BH3BT56 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC-0.02□□□□□ -2.41
CHKB-CPT1BH3BT56 AL356157.2-201ENST00000605122 111 ntBASIC-0.02□□□□□ -2.41
CHKB-CPT1BH3BT56 RMST_10.1-201ENST00000616309 154 ntBASIC-0.02□□□□□ -2.41
CHKB-CPT1BH3BT56 MIR6852-201ENST00000621699 66 ntBASIC-0.02□□□□□ -2.41
CHKB-CPT1BH3BT56 AC092656.1-203ENST00000624134 423 ntBASIC-0.02□□□□□ -2.41
CHKB-CPT1BH3BT56 AL356094.1-201ENST00000624663 1212 ntBASIC-0.02□□□□□ -2.41
CHKB-CPT1BH3BT56 AC241585.2-209ENST00000638217 143 ntBASIC-0.02□□□□□ -2.41
CHKB-CPT1BH3BT56 SNRPEP3-201ENST00000338402 276 ntBASIC-0.03□□□□□ -2.41
CHKB-CPT1BH3BT56 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC-0.03□□□□□ -2.41
CHKB-CPT1BH3BT56 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC-0.03□□□□□ -2.41
CHKB-CPT1BH3BT56 SNORD99-201ENST00000408612 74 ntBASIC-0.03□□□□□ -2.41
CHKB-CPT1BH3BT56 ELOCP9-201ENST00000418624 239 ntBASIC-0.03□□□□□ -2.41
CHKB-CPT1BH3BT56 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC-0.03□□□□□ -2.41
CHKB-CPT1BH3BT56 MTND4P20-201ENST00000424125 869 ntBASIC-0.03□□□□□ -2.41
CHKB-CPT1BH3BT56 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC-0.03□□□□□ -2.41
CHKB-CPT1BH3BT56 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC-0.03□□□□□ -2.41
CHKB-CPT1BH3BT56 AC092427.1-201ENST00000439177 601 ntBASIC-0.03□□□□□ -2.41
CHKB-CPT1BH3BT56 DAP3P1-201ENST00000441522 278 ntBASIC-0.03□□□□□ -2.41
CHKB-CPT1BH3BT56 MTND1P18-201ENST00000448191 573 ntBASIC-0.03□□□□□ -2.41
CHKB-CPT1BH3BT56 TOMM22P6-201ENST00000465035 409 ntBASIC-0.03□□□□□ -2.41
CHKB-CPT1BH3BT56 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC-0.03□□□□□ -2.41
CHKB-CPT1BH3BT56 WDR78-207ENST00000488333 613 ntTSL 3 BASIC-0.03□□□□□ -2.41
CHKB-CPT1BH3BT56 HMGN1P7-201ENST00000491722 313 ntBASIC-0.03□□□□□ -2.41
CHKB-CPT1BH3BT56 SNORA31.19-201ENST00000517079 126 ntBASIC-0.03□□□□□ -2.41
CHKB-CPT1BH3BT56 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC-0.03□□□□□ -2.41
CHKB-CPT1BH3BT56 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC-0.03□□□□□ -2.41
CHKB-CPT1BH3BT56 MIR4666A-201ENST00000580160 79 ntBASIC-0.03□□□□□ -2.41
CHKB-CPT1BH3BT56 AC098483.2-201ENST00000603158 454 ntBASIC-0.03□□□□□ -2.41
CHKB-CPT1BH3BT56 AL031281.1-201ENST00000604049 488 ntBASIC-0.03□□□□□ -2.41
CHKB-CPT1BH3BT56 AC016727.1-205ENST00000605437 569 ntBASIC-0.03□□□□□ -2.41
CHKB-CPT1BH3BT56 AC100812.1-201ENST00000607622 580 ntBASIC-0.03□□□□□ -2.41
CHKB-CPT1BH3BT56 AL360219.1-201ENST00000610230 366 ntBASIC-0.03□□□□□ -2.41
CHKB-CPT1BH3BT56 RNU6-862P-201ENST00000362804 105 ntBASIC-0.04□□□□□ -2.42
CHKB-CPT1BH3BT56 RNU6-97P-201ENST00000363387 104 ntBASIC-0.04□□□□□ -2.42
CHKB-CPT1BH3BT56 RNU6-343P-201ENST00000364709 104 ntBASIC-0.04□□□□□ -2.42
CHKB-CPT1BH3BT56 RNU6-342P-201ENST00000384521 104 ntBASIC-0.04□□□□□ -2.42
CHKB-CPT1BH3BT56 MIR634-201ENST00000385208 97 ntBASIC-0.04□□□□□ -2.42
CHKB-CPT1BH3BT56 SNORA40C-201ENST00000391285 128 ntBASIC-0.04□□□□□ -2.42
CHKB-CPT1BH3BT56 FGF7P8-201ENST00000402994 292 ntBASIC-0.04□□□□□ -2.42
CHKB-CPT1BH3BT56 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC-0.04□□□□□ -2.42
CHKB-CPT1BH3BT56 AL078601.1-201ENST00000444542 271 ntBASIC-0.04□□□□□ -2.42
CHKB-CPT1BH3BT56 AL606517.1-201ENST00000446914 387 ntBASIC-0.04□□□□□ -2.42
CHKB-CPT1BH3BT56 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC-0.04□□□□□ -2.42
CHKB-CPT1BH3BT56 SNRPFP3-201ENST00000457792 225 ntBASIC-0.04□□□□□ -2.42
CHKB-CPT1BH3BT56 AL162395.1-201ENST00000457882 422 ntBASIC-0.04□□□□□ -2.42
CHKB-CPT1BH3BT56 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC-0.04□□□□□ -2.42
CHKB-CPT1BH3BT56 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC-0.04□□□□□ -2.42
CHKB-CPT1BH3BT56 AC005741.1-201ENST00000511094 432 ntBASIC-0.04□□□□□ -2.42
CHKB-CPT1BH3BT56 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC-0.04□□□□□ -2.42
CHKB-CPT1BH3BT56 RNU1-41P-201ENST00000516161 162 ntBASIC-0.04□□□□□ -2.42
CHKB-CPT1BH3BT56 RNU1-48P-201ENST00000516400 162 ntBASIC-0.04□□□□□ -2.42
CHKB-CPT1BH3BT56 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC-0.04□□□□□ -2.42
CHKB-CPT1BH3BT56 AP002906.1-201ENST00000603405 233 ntBASIC-0.04□□□□□ -2.42
CHKB-CPT1BH3BT56 LARP7P1-201ENST00000605576 316 ntBASIC-0.04□□□□□ -2.42
CHKB-CPT1BH3BT56 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC-0.04□□□□□ -2.42
CHKB-CPT1BH3BT56 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC-0.04□□□□□ -2.42
CHKB-CPT1BH3BT56 MTND5P16-201ENST00000460269 1703 ntBASIC-0.04□□□□□ -2.42
CHKB-CPT1BH3BT56 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC-0.04□□□□□ -2.42
CHKB-CPT1BH3BT56 AL159152.1-201ENST00000635019 2587 ntBASIC-0.05□□□□□ -2.42
CHKB-CPT1BH3BT56 SNORD114-16-201ENST00000363044 70 ntBASIC-0.05□□□□□ -2.42
CHKB-CPT1BH3BT56 SNORA4.2-201ENST00000365313 147 ntBASIC-0.05□□□□□ -2.42
CHKB-CPT1BH3BT56 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC-0.05□□□□□ -2.42
CHKB-CPT1BH3BT56 ARL5AP1-201ENST00000418991 388 ntBASIC-0.05□□□□□ -2.42
CHKB-CPT1BH3BT56 RAC1P6-201ENST00000423911 575 ntBASIC-0.05□□□□□ -2.42
CHKB-CPT1BH3BT56 MTND4P24-201ENST00000424002 397 ntBASIC-0.05□□□□□ -2.42
CHKB-CPT1BH3BT56 RPL23AP95-201ENST00000426806 265 ntBASIC-0.05□□□□□ -2.42
CHKB-CPT1BH3BT56 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC-0.05□□□□□ -2.42
CHKB-CPT1BH3BT56 RNU7-21P-201ENST00000459430 62 ntBASIC-0.05□□□□□ -2.42
CHKB-CPT1BH3BT56 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC-0.05□□□□□ -2.42
CHKB-CPT1BH3BT56 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC-0.05□□□□□ -2.42
CHKB-CPT1BH3BT56 AC067942.3-201ENST00000512025 362 ntBASIC-0.05□□□□□ -2.42
CHKB-CPT1BH3BT56 AC024589.1-201ENST00000512207 263 ntBASIC-0.05□□□□□ -2.42
CHKB-CPT1BH3BT56 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC-0.05□□□□□ -2.42
CHKB-CPT1BH3BT56 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC-0.05□□□□□ -2.42
CHKB-CPT1BH3BT56 AL132657.2-201ENST00000564417 358 ntBASIC-0.05□□□□□ -2.42
CHKB-CPT1BH3BT56 MTCYBP33-201ENST00000575007 1130 ntBASIC-0.05□□□□□ -2.42
CHKB-CPT1BH3BT56 AL357080.1-201ENST00000617394 239 ntBASIC-0.05□□□□□ -2.42
CHKB-CPT1BH3BT56 AL353997.5-201ENST00000618886 171 ntBASIC-0.05□□□□□ -2.42
CHKB-CPT1BH3BT56 AL359740.1-201ENST00000624340 592 ntBASIC-0.05□□□□□ -2.42
CHKB-CPT1BH3BT56 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC-0.05□□□□□ -2.42
CHKB-CPT1BH3BT56 AC132825.7-201ENST00000638744 335 ntBASIC-0.05□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms