Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 RNU6-639P-201ENST00000384074 107 ntBASIC3.88□□□□□ -1.79
CCDC85CA6NKD9 RNU6-19P-201ENST00000384718 107 ntBASIC3.88□□□□□ -1.79
CCDC85CA6NKD9 MIR591-201ENST00000385290 95 ntBASIC3.88□□□□□ -1.79
CCDC85CA6NKD9 EIF1AXP1-201ENST00000419267 435 ntBASIC3.88□□□□□ -1.79
CCDC85CA6NKD9 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC3.88□□□□□ -1.79
CCDC85CA6NKD9 RPL23AP65-201ENST00000475608 468 ntBASIC3.88□□□□□ -1.79
CCDC85CA6NKD9 AC109925.1-201ENST00000478069 331 ntBASIC3.88□□□□□ -1.79
CCDC85CA6NKD9 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.88□□□□□ -1.79
CCDC85CA6NKD9 AC069499.1-201ENST00000489433 509 ntBASIC3.88□□□□□ -1.79
CCDC85CA6NKD9 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.88□□□□□ -1.79
CCDC85CA6NKD9 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC85CA6NKD9 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.88□□□□□ -1.79
CCDC85CA6NKD9 AL360085.1-201ENST00000604713 532 ntBASIC3.88□□□□□ -1.79
CCDC85CA6NKD9 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.88□□□□□ -1.79
CCDC85CA6NKD9 AC040896.1-201ENST00000613819 479 ntBASIC3.88□□□□□ -1.79
CCDC85CA6NKD9 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.88□□□□□ -1.79
CCDC85CA6NKD9 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
CCDC85CA6NKD9 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CCDC85CA6NKD9 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC3.87□□□□□ -1.79
CCDC85CA6NKD9 RBBP8P1-201ENST00000449447 1844 ntBASIC3.87□□□□□ -1.79
CCDC85CA6NKD9 Y_RNA.48-201ENST00000362710 103 ntBASIC3.87□□□□□ -1.79
CCDC85CA6NKD9 Y_RNA.80-201ENST00000362996 102 ntBASIC3.87□□□□□ -1.79
CCDC85CA6NKD9 Y_RNA.123-201ENST00000363338 102 ntBASIC3.87□□□□□ -1.79
CCDC85CA6NKD9 RNU6-1141P-201ENST00000364520 107 ntBASIC3.87□□□□□ -1.79
CCDC85CA6NKD9 RNU6-1222P-201ENST00000384615 107 ntBASIC3.87□□□□□ -1.79
CCDC85CA6NKD9 HDGFP1-201ENST00000405943 252 ntBASIC3.87□□□□□ -1.79
CCDC85CA6NKD9 MTCYBP2-201ENST00000407745 171 ntBASIC3.87□□□□□ -1.79
CCDC85CA6NKD9 RN7SKP61-201ENST00000410642 295 ntBASIC3.87□□□□□ -1.79
CCDC85CA6NKD9 RNA5SP184-201ENST00000411071 108 ntBASIC3.87□□□□□ -1.79
CCDC85CA6NKD9 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC3.87□□□□□ -1.79
CCDC85CA6NKD9 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CCDC85CA6NKD9 CEP57L1P1-201ENST00000430943 1201 ntBASIC3.87□□□□□ -1.79
CCDC85CA6NKD9 AL353997.1-201ENST00000432936 108 ntBASIC3.87□□□□□ -1.79
CCDC85CA6NKD9 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.87□□□□□ -1.79
CCDC85CA6NKD9 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.87□□□□□ -1.79
CCDC85CA6NKD9 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.87□□□□□ -1.79
CCDC85CA6NKD9 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.87□□□□□ -1.79
CCDC85CA6NKD9 SNORA25.10-201ENST00000515926 124 ntBASIC3.87□□□□□ -1.79
CCDC85CA6NKD9 RNU6-475P-201ENST00000516073 104 ntBASIC3.87□□□□□ -1.79
CCDC85CA6NKD9 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.87□□□□□ -1.79
CCDC85CA6NKD9 ELOCP29-201ENST00000588193 334 ntBASIC3.87□□□□□ -1.79
CCDC85CA6NKD9 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.87□□□□□ -1.79
CCDC85CA6NKD9 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CCDC85CA6NKD9 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CCDC85CA6NKD9 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.87□□□□□ -1.79
CCDC85CA6NKD9 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
CCDC85CA6NKD9 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CCDC85CA6NKD9 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.86□□□□□ -1.79
CCDC85CA6NKD9 AC002543.1-201ENST00000299783 1954 ntBASIC3.86□□□□□ -1.79
CCDC85CA6NKD9 RNU1-15P-201ENST00000353977 144 ntBASIC3.86□□□□□ -1.79
CCDC85CA6NKD9 RNU1-105P-201ENST00000363470 161 ntBASIC3.86□□□□□ -1.79
CCDC85CA6NKD9 Y_RNA.164-201ENST00000363709 102 ntBASIC3.86□□□□□ -1.79
CCDC85CA6NKD9 RAC1P3-201ENST00000416129 580 ntBASIC3.86□□□□□ -1.79
CCDC85CA6NKD9 CYCSP48-201ENST00000417124 323 ntBASIC3.86□□□□□ -1.79
CCDC85CA6NKD9 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.86□□□□□ -1.79
CCDC85CA6NKD9 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.86□□□□□ -1.79
CCDC85CA6NKD9 RN7SKP210-201ENST00000459176 261 ntBASIC3.86□□□□□ -1.79
CCDC85CA6NKD9 AC107626.1-201ENST00000471084 183 ntBASIC3.86□□□□□ -1.79
CCDC85CA6NKD9 RPS26P21-201ENST00000475397 348 ntBASIC3.86□□□□□ -1.79
CCDC85CA6NKD9 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.86□□□□□ -1.79
CCDC85CA6NKD9 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.86□□□□□ -1.79
CCDC85CA6NKD9 AC008413.1-201ENST00000511864 177 ntBASIC3.86□□□□□ -1.79
CCDC85CA6NKD9 RNU6-1045P-201ENST00000516321 107 ntBASIC3.86□□□□□ -1.79
CCDC85CA6NKD9 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC3.86□□□□□ -1.79
CCDC85CA6NKD9 GNAI2P1-201ENST00000541815 315 ntBASIC3.86□□□□□ -1.79
CCDC85CA6NKD9 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CCDC85CA6NKD9 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.86□□□□□ -1.79
CCDC85CA6NKD9 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.86□□□□□ -1.79
CCDC85CA6NKD9 AP003355.3-201ENST00000623465 114 ntBASIC3.86□□□□□ -1.79
CCDC85CA6NKD9 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
CCDC85CA6NKD9 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CCDC85CA6NKD9 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CCDC85CA6NKD9 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
CCDC85CA6NKD9 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CCDC85CA6NKD9 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CCDC85CA6NKD9 AP000560.1-201ENST00000624150 1937 ntBASIC3.85□□□□□ -1.79
CCDC85CA6NKD9 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CCDC85CA6NKD9 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CCDC85CA6NKD9 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
CCDC85CA6NKD9 RNU6-1286P-201ENST00000383871 107 ntBASIC3.85□□□□□ -1.79
CCDC85CA6NKD9 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
CCDC85CA6NKD9 MTND2P23-201ENST00000422990 651 ntBASIC3.85□□□□□ -1.79
CCDC85CA6NKD9 MRPS18CP6-201ENST00000423587 223 ntBASIC3.85□□□□□ -1.79
CCDC85CA6NKD9 MTCYBP10-201ENST00000424905 650 ntBASIC3.85□□□□□ -1.79
CCDC85CA6NKD9 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.85□□□□□ -1.79
CCDC85CA6NKD9 GSTA11P-201ENST00000452866 669 ntBASIC3.85□□□□□ -1.79
CCDC85CA6NKD9 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC3.85□□□□□ -1.79
CCDC85CA6NKD9 AC104581.2-201ENST00000572227 430 ntBASIC3.85□□□□□ -1.79
CCDC85CA6NKD9 MIR2682-201ENST00000580305 110 ntBASIC3.85□□□□□ -1.79
CCDC85CA6NKD9 AC025946.2-201ENST00000603398 234 ntBASIC3.85□□□□□ -1.79
CCDC85CA6NKD9 AC015813.4-201ENST00000610469 179 ntBASIC3.85□□□□□ -1.79
CCDC85CA6NKD9 AC007485.1-201ENST00000616755 206 ntBASIC3.85□□□□□ -1.79
CCDC85CA6NKD9 SCARNA4-201ENST00000629045 128 ntBASIC3.85□□□□□ -1.79
CCDC85CA6NKD9 SNORA43.4-201ENST00000629559 138 ntBASIC3.85□□□□□ -1.79
CCDC85CA6NKD9 U6.98-201ENST00000637157 84 ntBASIC3.85□□□□□ -1.79
CCDC85CA6NKD9 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CCDC85CA6NKD9 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC3.85□□□□□ -1.79
CCDC85CA6NKD9 AC009541.1-201ENST00000438279 2662 ntBASIC3.85□□□□□ -1.79
CCDC85CA6NKD9 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.84□□□□□ -1.79
CCDC85CA6NKD9 AC080128.1-201ENST00000474389 1917 ntBASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms