Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 AC010653.1-201ENST00000571108 881 ntBASIC3.73□□□□□ -1.81
PTPDC1A2A3K4 MIR5696-201ENST00000578474 85 ntBASIC3.73□□□□□ -1.81
PTPDC1A2A3K4 MIR4680-201ENST00000580906 66 ntBASIC3.73□□□□□ -1.81
PTPDC1A2A3K4 MIR4325-201ENST00000583049 90 ntBASIC3.73□□□□□ -1.81
PTPDC1A2A3K4 AC020895.1-201ENST00000595362 272 ntBASIC3.73□□□□□ -1.81
PTPDC1A2A3K4 uc_338.25-201ENST00000613756 156 ntBASIC3.73□□□□□ -1.81
PTPDC1A2A3K4 AL138880.2-201ENST00000616214 239 ntBASIC3.73□□□□□ -1.81
PTPDC1A2A3K4 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PTPDC1A2A3K4 MTND5P9-201ENST00000503854 1755 ntBASIC3.73□□□□□ -1.81
PTPDC1A2A3K4 AC110491.1-201ENST00000562191 2010 ntBASIC3.73□□□□□ -1.81
PTPDC1A2A3K4 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.73□□□□□ -1.81
PTPDC1A2A3K4 AP001148.1-201ENST00000624124 2359 ntBASIC3.73□□□□□ -1.81
PTPDC1A2A3K4 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.72□□□□□ -1.81
PTPDC1A2A3K4 ZNF299P-201ENST00000406845 1804 ntBASIC3.72□□□□□ -1.81
PTPDC1A2A3K4 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PTPDC1A2A3K4 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.72□□□□□ -1.81
PTPDC1A2A3K4 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
PTPDC1A2A3K4 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.72□□□□□ -1.81
PTPDC1A2A3K4 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.72□□□□□ -1.81
PTPDC1A2A3K4 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PTPDC1A2A3K4 Y_RNA.80-201ENST00000362996 102 ntBASIC3.72□□□□□ -1.81
PTPDC1A2A3K4 U3.6-201ENST00000363622 211 ntBASIC3.72□□□□□ -1.81
PTPDC1A2A3K4 Y_RNA.533-201ENST00000384596 114 ntBASIC3.72□□□□□ -1.81
PTPDC1A2A3K4 MRPS18CP6-201ENST00000423587 223 ntBASIC3.72□□□□□ -1.81
PTPDC1A2A3K4 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.72□□□□□ -1.81
PTPDC1A2A3K4 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.72□□□□□ -1.81
PTPDC1A2A3K4 HMGN2P10-201ENST00000448085 265 ntBASIC3.72□□□□□ -1.81
PTPDC1A2A3K4 MTND5P22-201ENST00000458380 195 ntBASIC3.72□□□□□ -1.81
PTPDC1A2A3K4 snoU13.28-201ENST00000459235 104 ntBASIC3.72□□□□□ -1.81
PTPDC1A2A3K4 RN7SL863P-201ENST00000462370 296 ntBASIC3.72□□□□□ -1.81
PTPDC1A2A3K4 RN7SL330P-201ENST00000469709 307 ntBASIC3.72□□□□□ -1.81
PTPDC1A2A3K4 AC006445.1-201ENST00000491925 405 ntBASIC3.72□□□□□ -1.81
PTPDC1A2A3K4 RNA5SP341-201ENST00000516261 117 ntBASIC3.72□□□□□ -1.81
PTPDC1A2A3K4 Y_RNA.720-201ENST00000517166 92 ntBASIC3.72□□□□□ -1.81
PTPDC1A2A3K4 GNAI2P1-201ENST00000541815 315 ntBASIC3.72□□□□□ -1.81
PTPDC1A2A3K4 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.72□□□□□ -1.81
PTPDC1A2A3K4 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.72□□□□□ -1.81
PTPDC1A2A3K4 AL158827.2-201ENST00000602494 330 ntBASIC3.72□□□□□ -1.81
PTPDC1A2A3K4 AC092447.9-201ENST00000603395 144 ntBASIC3.72□□□□□ -1.81
PTPDC1A2A3K4 HMGB1P24-202ENST00000615653 685 ntBASIC3.72□□□□□ -1.81
PTPDC1A2A3K4 AC092628.2-201ENST00000622492 339 ntBASIC3.72□□□□□ -1.81
PTPDC1A2A3K4 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.72□□□□□ -1.81
PTPDC1A2A3K4 AL691447.3-201ENST00000635020 330 ntBASIC3.72□□□□□ -1.81
PTPDC1A2A3K4 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.72□□□□□ -1.81
PTPDC1A2A3K4 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.71□□□□□ -1.81
PTPDC1A2A3K4 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
PTPDC1A2A3K4 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
PTPDC1A2A3K4 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
PTPDC1A2A3K4 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.71□□□□□ -1.82
PTPDC1A2A3K4 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
PTPDC1A2A3K4 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
PTPDC1A2A3K4 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
PTPDC1A2A3K4 RNU6-985P-201ENST00000410182 104 ntBASIC3.71□□□□□ -1.82
PTPDC1A2A3K4 AL591043.1-201ENST00000432461 424 ntBASIC3.71□□□□□ -1.82
PTPDC1A2A3K4 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC3.71□□□□□ -1.82
PTPDC1A2A3K4 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.71□□□□□ -1.82
PTPDC1A2A3K4 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.71□□□□□ -1.82
PTPDC1A2A3K4 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.71□□□□□ -1.82
PTPDC1A2A3K4 AC021739.1-201ENST00000559631 174 ntBASIC3.71□□□□□ -1.82
PTPDC1A2A3K4 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.71□□□□□ -1.82
PTPDC1A2A3K4 AC068831.7-201ENST00000616954 363 ntBASIC3.71□□□□□ -1.82
PTPDC1A2A3K4 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.71□□□□□ -1.82
PTPDC1A2A3K4 XIST_intron.1-201ENST00000619444 68 ntBASIC3.71□□□□□ -1.82
PTPDC1A2A3K4 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
PTPDC1A2A3K4 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.71□□□□□ -1.82
PTPDC1A2A3K4 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
PTPDC1A2A3K4 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
PTPDC1A2A3K4 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PTPDC1A2A3K4 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PTPDC1A2A3K4 SNORD50.1-201ENST00000362987 71 ntBASIC3.7□□□□□ -1.82
PTPDC1A2A3K4 RNU6-595P-201ENST00000363944 107 ntBASIC3.7□□□□□ -1.82
PTPDC1A2A3K4 RNU6-99P-201ENST00000364721 107 ntBASIC3.7□□□□□ -1.82
PTPDC1A2A3K4 RNU6-1280P-201ENST00000365211 107 ntBASIC3.7□□□□□ -1.82
PTPDC1A2A3K4 RNU6-784P-201ENST00000384330 106 ntBASIC3.7□□□□□ -1.82
PTPDC1A2A3K4 SNORD116-20-201ENST00000384529 92 ntBASIC3.7□□□□□ -1.82
PTPDC1A2A3K4 AL138885.1-201ENST00000405921 675 ntBASIC3.7□□□□□ -1.82
PTPDC1A2A3K4 AP000275.1-201ENST00000411943 390 ntBASIC3.7□□□□□ -1.82
PTPDC1A2A3K4 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC3.7□□□□□ -1.82
PTPDC1A2A3K4 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.7□□□□□ -1.82
PTPDC1A2A3K4 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC3.7□□□□□ -1.82
PTPDC1A2A3K4 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.7□□□□□ -1.82
PTPDC1A2A3K4 SSXP4-201ENST00000451349 245 ntBASIC3.7□□□□□ -1.82
PTPDC1A2A3K4 AC015911.1-201ENST00000495111 156 ntBASIC3.7□□□□□ -1.82
PTPDC1A2A3K4 AC105758.1-201ENST00000506038 399 ntBASIC3.7□□□□□ -1.82
PTPDC1A2A3K4 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC3.7□□□□□ -1.82
PTPDC1A2A3K4 CR383656.8-201ENST00000549046 145 ntBASIC3.7□□□□□ -1.82
PTPDC1A2A3K4 AP001836.1-201ENST00000604675 523 ntBASIC3.7□□□□□ -1.82
PTPDC1A2A3K4 AC009318.2-201ENST00000610917 651 ntBASIC3.7□□□□□ -1.82
PTPDC1A2A3K4 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
PTPDC1A2A3K4 AC005592.1-201ENST00000566527 1640 ntBASIC3.7□□□□□ -1.82
PTPDC1A2A3K4 ADAM3A-203ENST00000461344 2157 ntBASIC3.69□□□□□ -1.82
PTPDC1A2A3K4 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.69□□□□□ -1.82
PTPDC1A2A3K4 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.69□□□□□ -1.82
PTPDC1A2A3K4 Y_RNA.39-201ENST00000362620 98 ntBASIC3.69□□□□□ -1.82
PTPDC1A2A3K4 Y_RNA.111-201ENST00000363248 100 ntBASIC3.69□□□□□ -1.82
PTPDC1A2A3K4 Y_RNA.314-201ENST00000365114 102 ntBASIC3.69□□□□□ -1.82
PTPDC1A2A3K4 BTF3L4P2-201ENST00000392798 346 ntBASIC3.69□□□□□ -1.82
PTPDC1A2A3K4 RNU6-1156P-201ENST00000410365 100 ntBASIC3.69□□□□□ -1.82
PTPDC1A2A3K4 RNU2-23P-201ENST00000410545 195 ntBASIC3.69□□□□□ -1.82
PTPDC1A2A3K4 RPL32P35-201ENST00000415214 394 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms