Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 MIR1179-201ENST00000408703 91 ntBASIC3.64□□□□□ -1.83
SHISA3A0PJX4 RNU6-394P-201ENST00000410735 107 ntBASIC3.64□□□□□ -1.83
SHISA3A0PJX4 RN7SKP51-201ENST00000410781 304 ntBASIC3.64□□□□□ -1.83
SHISA3A0PJX4 RAB28P5-201ENST00000427490 651 ntBASIC3.64□□□□□ -1.83
SHISA3A0PJX4 RPL23AP82-202ENST00000427528 469 ntBASIC3.64□□□□□ -1.83
SHISA3A0PJX4 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.64□□□□□ -1.83
SHISA3A0PJX4 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC3.64□□□□□ -1.83
SHISA3A0PJX4 AL161651.1-201ENST00000440882 223 ntBASIC3.64□□□□□ -1.83
SHISA3A0PJX4 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC3.64□□□□□ -1.83
SHISA3A0PJX4 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.64□□□□□ -1.83
SHISA3A0PJX4 AC006463.2-201ENST00000473326 348 ntBASIC3.64□□□□□ -1.83
SHISA3A0PJX4 AL121594.1-201ENST00000475906 575 ntBASIC3.64□□□□□ -1.83
SHISA3A0PJX4 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.64□□□□□ -1.83
SHISA3A0PJX4 RAB9BP1-201ENST00000519581 626 ntBASIC3.64□□□□□ -1.83
SHISA3A0PJX4 AC055872.1-201ENST00000570978 278 ntBASIC3.64□□□□□ -1.83
SHISA3A0PJX4 MIR3144-201ENST00000579460 79 ntBASIC3.64□□□□□ -1.83
SHISA3A0PJX4 AC024220.1-201ENST00000603675 484 ntBASIC3.64□□□□□ -1.83
SHISA3A0PJX4 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC3.64□□□□□ -1.83
SHISA3A0PJX4 AC108706.1-201ENST00000611053 297 ntBASIC3.64□□□□□ -1.83
SHISA3A0PJX4 AF117829.1-206ENST00000621883 3802 ntBASIC3.64□□□□□ -1.83
SHISA3A0PJX4 SNORD98-201ENST00000636377 67 ntBASIC3.64□□□□□ -1.83
SHISA3A0PJX4 RAD17P1-201ENST00000418130 2042 ntBASIC3.64□□□□□ -1.83
SHISA3A0PJX4 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.64□□□□□ -1.83
SHISA3A0PJX4 AL133412.1-201ENST00000380194 2992 ntBASIC3.64□□□□□ -1.83
SHISA3A0PJX4 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
SHISA3A0PJX4 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.64□□□□□ -1.83
SHISA3A0PJX4 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
SHISA3A0PJX4 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
SHISA3A0PJX4 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC3.64□□□□□ -1.83
SHISA3A0PJX4 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SHISA3A0PJX4 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
SHISA3A0PJX4 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.64□□□□□ -1.83
SHISA3A0PJX4 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.63□□□□□ -1.83
SHISA3A0PJX4 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.63□□□□□ -1.83
SHISA3A0PJX4 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SHISA3A0PJX4 AC092593.1-201ENST00000515413 1815 ntBASIC3.63□□□□□ -1.83
SHISA3A0PJX4 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
SHISA3A0PJX4 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SHISA3A0PJX4 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SHISA3A0PJX4 RNU6-799P-201ENST00000363567 107 ntBASIC3.63□□□□□ -1.83
SHISA3A0PJX4 RNU6-704P-201ENST00000364162 103 ntBASIC3.63□□□□□ -1.83
SHISA3A0PJX4 Y_RNA.308-201ENST00000365043 101 ntBASIC3.63□□□□□ -1.83
SHISA3A0PJX4 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC3.63□□□□□ -1.83
SHISA3A0PJX4 OOSP1P1-201ENST00000423265 274 ntBASIC3.63□□□□□ -1.83
SHISA3A0PJX4 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.63□□□□□ -1.83
SHISA3A0PJX4 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.63□□□□□ -1.83
SHISA3A0PJX4 RN7SL738P-201ENST00000470264 297 ntBASIC3.63□□□□□ -1.83
SHISA3A0PJX4 AC107626.1-201ENST00000471084 183 ntBASIC3.63□□□□□ -1.83
SHISA3A0PJX4 AC091179.3-201ENST00000474761 144 ntBASIC3.63□□□□□ -1.83
SHISA3A0PJX4 RNU6-191P-201ENST00000516295 94 ntBASIC3.63□□□□□ -1.83
SHISA3A0PJX4 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC3.63□□□□□ -1.83
SHISA3A0PJX4 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.63□□□□□ -1.83
SHISA3A0PJX4 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.63□□□□□ -1.83
SHISA3A0PJX4 SNRPGP20-201ENST00000604477 205 ntBASIC3.63□□□□□ -1.83
SHISA3A0PJX4 RNU6-91P-201ENST00000607774 107 ntBASIC3.63□□□□□ -1.83
SHISA3A0PJX4 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.63□□□□□ -1.83
SHISA3A0PJX4 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.63□□□□□ -1.83
SHISA3A0PJX4 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SHISA3A0PJX4 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.63□□□□□ -1.83
SHISA3A0PJX4 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SHISA3A0PJX4 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
SHISA3A0PJX4 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SHISA3A0PJX4 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
SHISA3A0PJX4 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SHISA3A0PJX4 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SHISA3A0PJX4 RNU6-748P-201ENST00000384648 107 ntBASIC3.62□□□□□ -1.83
SHISA3A0PJX4 U3.26-201ENST00000391236 204 ntBASIC3.62□□□□□ -1.83
SHISA3A0PJX4 RPS16P5-201ENST00000406501 404 ntBASIC3.62□□□□□ -1.83
SHISA3A0PJX4 ELOCP21-201ENST00000412558 336 ntBASIC3.62□□□□□ -1.83
SHISA3A0PJX4 AL157831.1-201ENST00000426134 473 ntBASIC3.62□□□□□ -1.83
SHISA3A0PJX4 PTGES3P4-201ENST00000426243 356 ntBASIC3.62□□□□□ -1.83
SHISA3A0PJX4 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.62□□□□□ -1.83
SHISA3A0PJX4 RPL23AP52-201ENST00000439311 478 ntBASIC3.62□□□□□ -1.83
SHISA3A0PJX4 IFNA11P-201ENST00000446352 526 ntBASIC3.62□□□□□ -1.83
SHISA3A0PJX4 AC073264.2-201ENST00000448886 166 ntBASIC3.62□□□□□ -1.83
SHISA3A0PJX4 HMGN2P16-201ENST00000456802 261 ntBASIC3.62□□□□□ -1.83
SHISA3A0PJX4 RPL32P34-201ENST00000486380 400 ntBASIC3.62□□□□□ -1.83
SHISA3A0PJX4 AIG1P1-201ENST00000503376 148 ntBASIC3.62□□□□□ -1.83
SHISA3A0PJX4 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC3.62□□□□□ -1.83
SHISA3A0PJX4 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC3.62□□□□□ -1.83
SHISA3A0PJX4 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.62□□□□□ -1.83
SHISA3A0PJX4 AC105137.2-201ENST00000569073 466 ntBASIC3.62□□□□□ -1.83
SHISA3A0PJX4 MIR4308-201ENST00000580634 81 ntBASIC3.62□□□□□ -1.83
SHISA3A0PJX4 AL713866.2-201ENST00000603579 219 ntBASIC3.62□□□□□ -1.83
SHISA3A0PJX4 AC005828.6-201ENST00000606610 232 ntBASIC3.62□□□□□ -1.83
SHISA3A0PJX4 AC004832.4-201ENST00000608952 331 ntBASIC3.62□□□□□ -1.83
SHISA3A0PJX4 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.62□□□□□ -1.83
SHISA3A0PJX4 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.62□□□□□ -1.83
SHISA3A0PJX4 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
SHISA3A0PJX4 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SHISA3A0PJX4 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SHISA3A0PJX4 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
SHISA3A0PJX4 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SHISA3A0PJX4 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SHISA3A0PJX4 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SHISA3A0PJX4 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.61□□□□□ -1.83
SHISA3A0PJX4 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
SHISA3A0PJX4 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SHISA3A0PJX4 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
SHISA3A0PJX4 RNU1-18P-201ENST00000363062 164 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms