Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 SNORD116-20-201ENST00000384529 92 ntBASIC1.97□□□□□ -2.09
SMIM28A0A1B0GU29 MIR1294-201ENST00000408503 142 ntBASIC1.97□□□□□ -2.09
SMIM28A0A1B0GU29 AC097463.2-201ENST00000421074 142 ntBASIC1.97□□□□□ -2.09
SMIM28A0A1B0GU29 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.97□□□□□ -2.09
SMIM28A0A1B0GU29 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC1.97□□□□□ -2.09
SMIM28A0A1B0GU29 AL356010.1-201ENST00000456364 102 ntBASIC1.97□□□□□ -2.09
SMIM28A0A1B0GU29 AC080013.2-201ENST00000460866 323 ntBASIC1.97□□□□□ -2.09
SMIM28A0A1B0GU29 AC018437.1-201ENST00000492214 406 ntBASIC1.97□□□□□ -2.09
SMIM28A0A1B0GU29 AC008526.1-201ENST00000509149 338 ntBASIC1.97□□□□□ -2.09
SMIM28A0A1B0GU29 RNU2-69P-201ENST00000516061 100 ntBASIC1.97□□□□□ -2.09
SMIM28A0A1B0GU29 RNU5B-3P-201ENST00000516601 115 ntBASIC1.97□□□□□ -2.09
SMIM28A0A1B0GU29 RNU6-405P-201ENST00000516637 110 ntBASIC1.97□□□□□ -2.09
SMIM28A0A1B0GU29 SNORA43.2-201ENST00000516652 128 ntBASIC1.97□□□□□ -2.09
SMIM28A0A1B0GU29 AP005902.1-201ENST00000521358 186 ntBASIC1.97□□□□□ -2.09
SMIM28A0A1B0GU29 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.97□□□□□ -2.09
SMIM28A0A1B0GU29 BNIP3P6-201ENST00000549284 499 ntBASIC1.97□□□□□ -2.09
SMIM28A0A1B0GU29 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
SMIM28A0A1B0GU29 AC078795.2-201ENST00000602835 1252 ntBASIC1.97□□□□□ -2.09
SMIM28A0A1B0GU29 AC093788.1-201ENST00000609356 927 ntBASIC1.97□□□□□ -2.09
SMIM28A0A1B0GU29 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.97□□□□□ -2.09
SMIM28A0A1B0GU29 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.97□□□□□ -2.09
SMIM28A0A1B0GU29 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
SMIM28A0A1B0GU29 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
SMIM28A0A1B0GU29 MTND5P26-201ENST00000426018 1752 ntBASIC1.96□□□□□ -2.1
SMIM28A0A1B0GU29 Y_RNA.1-201ENST00000352915 104 ntBASIC1.96□□□□□ -2.1
SMIM28A0A1B0GU29 RNU6-78P-201ENST00000362897 107 ntBASIC1.96□□□□□ -2.1
SMIM28A0A1B0GU29 Y_RNA.296-201ENST00000364930 108 ntBASIC1.96□□□□□ -2.1
SMIM28A0A1B0GU29 RNU6-622P-201ENST00000384272 103 ntBASIC1.96□□□□□ -2.1
SMIM28A0A1B0GU29 RNU6-843P-201ENST00000384454 104 ntBASIC1.96□□□□□ -2.1
SMIM28A0A1B0GU29 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
SMIM28A0A1B0GU29 RNU6-1158P-201ENST00000391167 107 ntBASIC1.96□□□□□ -2.1
SMIM28A0A1B0GU29 RNU6-903P-201ENST00000391270 109 ntBASIC1.96□□□□□ -2.1
SMIM28A0A1B0GU29 U6atac.2-201ENST00000408644 118 ntBASIC1.96□□□□□ -2.1
SMIM28A0A1B0GU29 RNU4-55P-201ENST00000410731 137 ntBASIC1.96□□□□□ -2.1
SMIM28A0A1B0GU29 CYCSP48-201ENST00000417124 323 ntBASIC1.96□□□□□ -2.1
SMIM28A0A1B0GU29 AC016907.1-201ENST00000419483 435 ntBASIC1.96□□□□□ -2.1
SMIM28A0A1B0GU29 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.96□□□□□ -2.1
SMIM28A0A1B0GU29 AC010975.2-201ENST00000427781 588 ntBASIC1.96□□□□□ -2.1
SMIM28A0A1B0GU29 AC002486.1-201ENST00000435098 391 ntBASIC1.96□□□□□ -2.1
SMIM28A0A1B0GU29 HMGB1P31-201ENST00000437242 427 ntBASIC1.96□□□□□ -2.1
SMIM28A0A1B0GU29 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.96□□□□□ -2.1
SMIM28A0A1B0GU29 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC1.96□□□□□ -2.1
SMIM28A0A1B0GU29 AC073415.1-201ENST00000449240 153 ntBASIC1.96□□□□□ -2.1
SMIM28A0A1B0GU29 AC079382.1-201ENST00000493346 557 ntBASIC1.96□□□□□ -2.1
SMIM28A0A1B0GU29 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.96□□□□□ -2.1
SMIM28A0A1B0GU29 SNORA31.23-201ENST00000517219 133 ntBASIC1.96□□□□□ -2.1
SMIM28A0A1B0GU29 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.96□□□□□ -2.1
SMIM28A0A1B0GU29 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.96□□□□□ -2.1
SMIM28A0A1B0GU29 AC091805.2-201ENST00000603848 235 ntBASIC1.96□□□□□ -2.1
SMIM28A0A1B0GU29 AC021646.1-201ENST00000605469 484 ntBASIC1.96□□□□□ -2.1
SMIM28A0A1B0GU29 Z99129.1-201ENST00000612510 255 ntBASIC1.96□□□□□ -2.1
SMIM28A0A1B0GU29 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.96□□□□□ -2.1
SMIM28A0A1B0GU29 RMST_7.1-201ENST00000621935 268 ntBASIC1.96□□□□□ -2.1
SMIM28A0A1B0GU29 AL031601.2-202ENST00000622650 282 ntBASIC1.96□□□□□ -2.1
SMIM28A0A1B0GU29 AC084768.2-201ENST00000622736 221 ntBASIC1.96□□□□□ -2.1
SMIM28A0A1B0GU29 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.95□□□□□ -2.1
SMIM28A0A1B0GU29 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
SMIM28A0A1B0GU29 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.95□□□□□ -2.1
SMIM28A0A1B0GU29 Y_RNA.40-201ENST00000362645 93 ntBASIC1.95□□□□□ -2.1
SMIM28A0A1B0GU29 RNA5SP138-201ENST00000365098 114 ntBASIC1.95□□□□□ -2.1
SMIM28A0A1B0GU29 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
SMIM28A0A1B0GU29 RNU6-482P-201ENST00000391068 107 ntBASIC1.95□□□□□ -2.1
SMIM28A0A1B0GU29 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.95□□□□□ -2.1
SMIM28A0A1B0GU29 EIF4EP4-201ENST00000424916 578 ntBASIC1.95□□□□□ -2.1
SMIM28A0A1B0GU29 AC008267.5-201ENST00000424928 265 ntBASIC1.95□□□□□ -2.1
SMIM28A0A1B0GU29 DNAJC19P4-201ENST00000440115 345 ntBASIC1.95□□□□□ -2.1
SMIM28A0A1B0GU29 AL122001.1-201ENST00000457027 370 ntBASIC1.95□□□□□ -2.1
SMIM28A0A1B0GU29 RNU7-63P-201ENST00000459054 62 ntBASIC1.95□□□□□ -2.1
SMIM28A0A1B0GU29 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.95□□□□□ -2.1
SMIM28A0A1B0GU29 GMFBP1-201ENST00000467831 427 ntBASIC1.95□□□□□ -2.1
SMIM28A0A1B0GU29 CCDC34P1-201ENST00000507441 517 ntBASIC1.95□□□□□ -2.1
SMIM28A0A1B0GU29 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
SMIM28A0A1B0GU29 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC1.95□□□□□ -2.1
SMIM28A0A1B0GU29 AGGF1P4-201ENST00000568249 801 ntBASIC1.95□□□□□ -2.1
SMIM28A0A1B0GU29 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.95□□□□□ -2.1
SMIM28A0A1B0GU29 AL713866.2-201ENST00000603579 219 ntBASIC1.95□□□□□ -2.1
SMIM28A0A1B0GU29 RNU6-91P-201ENST00000607774 107 ntBASIC1.95□□□□□ -2.1
SMIM28A0A1B0GU29 AC103591.3-201ENST00000608684 209 ntBASIC1.95□□□□□ -2.1
SMIM28A0A1B0GU29 AC007684.1-201ENST00000609671 477 ntBASIC1.95□□□□□ -2.1
SMIM28A0A1B0GU29 AC093783.1-201ENST00000612976 329 ntBASIC1.95□□□□□ -2.1
SMIM28A0A1B0GU29 MIR6895-201ENST00000613497 78 ntBASIC1.95□□□□□ -2.1
SMIM28A0A1B0GU29 AC009090.3-201ENST00000616553 565 ntBASIC1.95□□□□□ -2.1
SMIM28A0A1B0GU29 AL353997.5-201ENST00000618886 171 ntBASIC1.95□□□□□ -2.1
SMIM28A0A1B0GU29 AC026585.1-201ENST00000619582 524 ntBASIC1.95□□□□□ -2.1
SMIM28A0A1B0GU29 AC022418.1-201ENST00000624118 445 ntBASIC1.95□□□□□ -2.1
SMIM28A0A1B0GU29 Z69720.2-201ENST00000624755 279 ntBASIC1.95□□□□□ -2.1
SMIM28A0A1B0GU29 AP003400.5-201ENST00000624827 617 ntBASIC1.95□□□□□ -2.1
SMIM28A0A1B0GU29 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.95□□□□□ -2.1
SMIM28A0A1B0GU29 SNORA16.1-201ENST00000364597 132 ntBASIC1.94□□□□□ -2.1
SMIM28A0A1B0GU29 SNORA6-201ENST00000384033 151 ntBASIC1.94□□□□□ -2.1
SMIM28A0A1B0GU29 RNU5A-6P-201ENST00000384136 116 ntBASIC1.94□□□□□ -2.1
SMIM28A0A1B0GU29 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
SMIM28A0A1B0GU29 SNORD70.1-201ENST00000391007 85 ntBASIC1.94□□□□□ -2.1
SMIM28A0A1B0GU29 RNA5SP213-201ENST00000391031 106 ntBASIC1.94□□□□□ -2.1
SMIM28A0A1B0GU29 AL663109.1-201ENST00000411498 844 ntBASIC1.94□□□□□ -2.1
SMIM28A0A1B0GU29 UBE2V1P10-201ENST00000414685 269 ntBASIC1.94□□□□□ -2.1
SMIM28A0A1B0GU29 RPS3AP44-201ENST00000425466 790 ntBASIC1.94□□□□□ -2.1
SMIM28A0A1B0GU29 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC1.94□□□□□ -2.1
SMIM28A0A1B0GU29 RPL7P12-201ENST00000446719 750 ntBASIC1.94□□□□□ -2.1
SMIM28A0A1B0GU29 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms