Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC0.48□□□□□ -2.33
TRAV17A0A0B4J275 ELL2P3-201ENST00000457883 1602 ntBASIC0.48□□□□□ -2.33
TRAV17A0A0B4J275 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC0.48□□□□□ -2.33
TRAV17A0A0B4J275 RNA5SP499-201ENST00000363982 119 ntBASIC0.47□□□□□ -2.33
TRAV17A0A0B4J275 RNU6-743P-201ENST00000364151 106 ntBASIC0.47□□□□□ -2.33
TRAV17A0A0B4J275 MIR29B2-201ENST00000385055 81 ntBASIC0.47□□□□□ -2.33
TRAV17A0A0B4J275 SNORA40C-201ENST00000391285 128 ntBASIC0.47□□□□□ -2.33
TRAV17A0A0B4J275 RNU6-733P-201ENST00000410759 104 ntBASIC0.47□□□□□ -2.33
TRAV17A0A0B4J275 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.47□□□□□ -2.33
TRAV17A0A0B4J275 RPL21P24-201ENST00000413752 448 ntBASIC0.47□□□□□ -2.33
TRAV17A0A0B4J275 AC138623.1-201ENST00000418060 216 ntBASIC0.47□□□□□ -2.33
TRAV17A0A0B4J275 AC083875.1-201ENST00000419509 405 ntBASIC0.47□□□□□ -2.33
TRAV17A0A0B4J275 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC0.47□□□□□ -2.33
TRAV17A0A0B4J275 TIMM9P1-201ENST00000436122 256 ntBASIC0.47□□□□□ -2.33
TRAV17A0A0B4J275 AC114878.1-201ENST00000441166 358 ntBASIC0.47□□□□□ -2.33
TRAV17A0A0B4J275 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC0.47□□□□□ -2.33
TRAV17A0A0B4J275 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC0.47□□□□□ -2.33
TRAV17A0A0B4J275 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC0.47□□□□□ -2.33
TRAV17A0A0B4J275 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.47□□□□□ -2.33
TRAV17A0A0B4J275 RPF2P2-201ENST00000504693 896 ntBASIC0.47□□□□□ -2.33
TRAV17A0A0B4J275 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC0.47□□□□□ -2.33
TRAV17A0A0B4J275 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC0.47□□□□□ -2.33
TRAV17A0A0B4J275 RNU6-551P-201ENST00000516661 103 ntBASIC0.47□□□□□ -2.33
TRAV17A0A0B4J275 RNU6-197P-201ENST00000516680 100 ntBASIC0.47□□□□□ -2.33
TRAV17A0A0B4J275 RNA5SP437-201ENST00000517249 129 ntBASIC0.47□□□□□ -2.33
TRAV17A0A0B4J275 AC136628.3-201ENST00000521868 290 ntBASIC0.47□□□□□ -2.33
TRAV17A0A0B4J275 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.47□□□□□ -2.33
TRAV17A0A0B4J275 OR6C7P-201ENST00000547875 934 ntBASIC0.47□□□□□ -2.33
TRAV17A0A0B4J275 MIR4789-201ENST00000577469 82 ntBASIC0.47□□□□□ -2.33
TRAV17A0A0B4J275 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.47□□□□□ -2.33
TRAV17A0A0B4J275 MIR5094-201ENST00000578766 85 ntBASIC0.47□□□□□ -2.33
TRAV17A0A0B4J275 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC0.47□□□□□ -2.33
TRAV17A0A0B4J275 MIR3664-201ENST00000579074 99 ntBASIC0.47□□□□□ -2.33
TRAV17A0A0B4J275 AC090330.1-201ENST00000588646 764 ntBASIC0.47□□□□□ -2.33
TRAV17A0A0B4J275 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC0.47□□□□□ -2.33
TRAV17A0A0B4J275 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC0.47□□□□□ -2.33
TRAV17A0A0B4J275 uc_338.17-201ENST00000619633 179 ntBASIC0.47□□□□□ -2.33
TRAV17A0A0B4J275 AC130454.1-201ENST00000622948 401 ntBASIC0.47□□□□□ -2.33
TRAV17A0A0B4J275 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
TRAV17A0A0B4J275 AC107982.1-201ENST00000507171 1300 ntBASIC0.46□□□□□ -2.34
TRAV17A0A0B4J275 RNU6-792P-201ENST00000363490 107 ntBASIC0.46□□□□□ -2.34
TRAV17A0A0B4J275 RNU6-288P-201ENST00000363690 104 ntBASIC0.46□□□□□ -2.34
TRAV17A0A0B4J275 SNORA4.1-201ENST00000364263 144 ntBASIC0.46□□□□□ -2.34
TRAV17A0A0B4J275 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.46□□□□□ -2.34
TRAV17A0A0B4J275 SNORD65.1-201ENST00000390889 71 ntBASIC0.46□□□□□ -2.34
TRAV17A0A0B4J275 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.46□□□□□ -2.34
TRAV17A0A0B4J275 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.46□□□□□ -2.34
TRAV17A0A0B4J275 AC114737.2-201ENST00000421583 173 ntBASIC0.46□□□□□ -2.34
TRAV17A0A0B4J275 MTND4LP7-201ENST00000431728 294 ntBASIC0.46□□□□□ -2.34
TRAV17A0A0B4J275 MTCYBP15-201ENST00000433123 1127 ntBASIC0.46□□□□□ -2.34
TRAV17A0A0B4J275 MTND1P30-201ENST00000441241 901 ntBASIC0.46□□□□□ -2.34
TRAV17A0A0B4J275 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC0.46□□□□□ -2.34
TRAV17A0A0B4J275 AC134050.1-201ENST00000495088 933 ntBASIC0.46□□□□□ -2.34
TRAV17A0A0B4J275 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC0.46□□□□□ -2.34
TRAV17A0A0B4J275 AC137800.2-201ENST00000574375 120 ntBASIC0.46□□□□□ -2.34
TRAV17A0A0B4J275 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC0.46□□□□□ -2.34
TRAV17A0A0B4J275 AC084824.5-201ENST00000612009 413 ntBASIC0.46□□□□□ -2.34
TRAV17A0A0B4J275 AC130324.3-201ENST00000614165 542 ntBASIC0.46□□□□□ -2.34
TRAV17A0A0B4J275 AC123767.1-202ENST00000620407 817 ntBASIC0.46□□□□□ -2.34
TRAV17A0A0B4J275 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.45□□□□□ -2.34
TRAV17A0A0B4J275 LINC02555-201ENST00000563933 1951 ntBASIC0.45□□□□□ -2.34
TRAV17A0A0B4J275 Y_RNA.332-201ENST00000365271 113 ntBASIC0.45□□□□□ -2.34
TRAV17A0A0B4J275 RNU6-166P-201ENST00000384371 107 ntBASIC0.45□□□□□ -2.34
TRAV17A0A0B4J275 MIR608-201ENST00000384820 100 ntBASIC0.45□□□□□ -2.34
TRAV17A0A0B4J275 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.45□□□□□ -2.34
TRAV17A0A0B4J275 RPL21P111-201ENST00000418453 477 ntBASIC0.45□□□□□ -2.34
TRAV17A0A0B4J275 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
TRAV17A0A0B4J275 SEPT14P24-201ENST00000447236 180 ntBASIC0.45□□□□□ -2.34
TRAV17A0A0B4J275 RPL37P6-201ENST00000460682 294 ntBASIC0.45□□□□□ -2.34
TRAV17A0A0B4J275 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC0.45□□□□□ -2.34
TRAV17A0A0B4J275 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
TRAV17A0A0B4J275 AC092989.1-201ENST00000481235 277 ntBASIC0.45□□□□□ -2.34
TRAV17A0A0B4J275 AC087854.1-201ENST00000519706 414 ntBASIC0.45□□□□□ -2.34
TRAV17A0A0B4J275 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC0.45□□□□□ -2.34
TRAV17A0A0B4J275 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC0.45□□□□□ -2.34
TRAV17A0A0B4J275 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC0.45□□□□□ -2.34
TRAV17A0A0B4J275 AL133153.1-201ENST00000557756 303 ntBASIC0.45□□□□□ -2.34
TRAV17A0A0B4J275 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.45□□□□□ -2.34
TRAV17A0A0B4J275 VN1R83P-201ENST00000595685 445 ntBASIC0.45□□□□□ -2.34
TRAV17A0A0B4J275 AC105129.3-201ENST00000605455 485 ntBASIC0.45□□□□□ -2.34
TRAV17A0A0B4J275 MIR3529-201ENST00000637713 78 ntBASIC0.45□□□□□ -2.34
TRAV17A0A0B4J275 ANKRD36BP1-202ENST00000604892 1417 ntBASIC0.45□□□□□ -2.34
TRAV17A0A0B4J275 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
TRAV17A0A0B4J275 AC083799.1-201ENST00000366451 910 ntBASIC0.44□□□□□ -2.34
TRAV17A0A0B4J275 ERHP2-201ENST00000402323 299 ntBASIC0.44□□□□□ -2.34
TRAV17A0A0B4J275 RNU2-23P-201ENST00000410545 195 ntBASIC0.44□□□□□ -2.34
TRAV17A0A0B4J275 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
TRAV17A0A0B4J275 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.44□□□□□ -2.34
TRAV17A0A0B4J275 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.44□□□□□ -2.34
TRAV17A0A0B4J275 SEPT7P5-201ENST00000434048 306 ntBASIC0.44□□□□□ -2.34
TRAV17A0A0B4J275 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.44□□□□□ -2.34
TRAV17A0A0B4J275 MTND4P6-201ENST00000438297 472 ntBASIC0.44□□□□□ -2.34
TRAV17A0A0B4J275 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.44□□□□□ -2.34
TRAV17A0A0B4J275 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
TRAV17A0A0B4J275 RPS27AP8-201ENST00000452665 445 ntBASIC0.44□□□□□ -2.34
TRAV17A0A0B4J275 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC0.44□□□□□ -2.34
TRAV17A0A0B4J275 RNU6-583P-201ENST00000516012 92 ntBASIC0.44□□□□□ -2.34
TRAV17A0A0B4J275 RN7SKP88-201ENST00000516847 250 ntBASIC0.44□□□□□ -2.34
TRAV17A0A0B4J275 SNORA31.19-201ENST00000517079 126 ntBASIC0.44□□□□□ -2.34
TRAV17A0A0B4J275 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC0.44□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms