Protein–RNA interactions for Protein: A0A0B4J244

TRAV3, T-cell receptor alpha variable 3 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3A0A0B4J244 SNORD116-28-201ENST00000516123 91 ntBASIC0.74□□□□□ -2.29
TRAV3A0A0B4J244 AP000907.2-201ENST00000530827 353 ntBASIC0.74□□□□□ -2.29
TRAV3A0A0B4J244 AC015688.6-201ENST00000577737 104 ntBASIC0.74□□□□□ -2.29
TRAV3A0A0B4J244 AP003465.2-201ENST00000602571 373 ntBASIC0.74□□□□□ -2.29
TRAV3A0A0B4J244 AL078603.1-201ENST00000603824 313 ntBASIC0.74□□□□□ -2.29
TRAV3A0A0B4J244 MIR15A-201ENST00000607334 83 ntBASIC0.74□□□□□ -2.29
TRAV3A0A0B4J244 AL355816.2-201ENST00000610049 647 ntBASIC0.74□□□□□ -2.29
TRAV3A0A0B4J244 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.74□□□□□ -2.29
TRAV3A0A0B4J244 AP000943.4-201ENST00000622912 357 ntBASIC0.74□□□□□ -2.29
TRAV3A0A0B4J244 AC130454.1-201ENST00000622948 401 ntBASIC0.74□□□□□ -2.29
TRAV3A0A0B4J244 ICE2P2-201ENST00000483823 2787 ntBASIC0.74□□□□□ -2.29
TRAV3A0A0B4J244 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC0.73□□□□□ -2.29
TRAV3A0A0B4J244 AL391516.1-201ENST00000554380 2449 ntBASIC0.73□□□□□ -2.29
TRAV3A0A0B4J244 RNU6-960P-201ENST00000364056 120 ntBASIC0.73□□□□□ -2.29
TRAV3A0A0B4J244 RNU5E-6P-201ENST00000365574 115 ntBASIC0.73□□□□□ -2.29
TRAV3A0A0B4J244 RNU6-769P-201ENST00000384407 104 ntBASIC0.73□□□□□ -2.29
TRAV3A0A0B4J244 MIR518E-201ENST00000385252 88 ntBASIC0.73□□□□□ -2.29
TRAV3A0A0B4J244 BTF3L4P1-201ENST00000413813 468 ntBASIC0.73□□□□□ -2.29
TRAV3A0A0B4J244 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
TRAV3A0A0B4J244 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC0.73□□□□□ -2.29
TRAV3A0A0B4J244 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC0.73□□□□□ -2.29
TRAV3A0A0B4J244 RPL39P29-201ENST00000447779 157 ntBASIC0.73□□□□□ -2.29
TRAV3A0A0B4J244 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.73□□□□□ -2.29
TRAV3A0A0B4J244 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC0.73□□□□□ -2.29
TRAV3A0A0B4J244 AC108729.1-201ENST00000487812 947 ntBASIC0.73□□□□□ -2.29
TRAV3A0A0B4J244 AC079140.2-201ENST00000506193 142 ntBASIC0.73□□□□□ -2.29
TRAV3A0A0B4J244 ARL2BPP4-201ENST00000506854 471 ntBASIC0.73□□□□□ -2.29
TRAV3A0A0B4J244 AC109445.1-201ENST00000512356 383 ntBASIC0.73□□□□□ -2.29
TRAV3A0A0B4J244 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.73□□□□□ -2.29
TRAV3A0A0B4J244 CBX3P8-201ENST00000532412 525 ntBASIC0.73□□□□□ -2.29
TRAV3A0A0B4J244 AC090115.3-201ENST00000553218 849 ntBASIC0.73□□□□□ -2.29
TRAV3A0A0B4J244 AC009712.1-201ENST00000564938 316 ntBASIC0.73□□□□□ -2.29
TRAV3A0A0B4J244 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC0.73□□□□□ -2.29
TRAV3A0A0B4J244 MIR4452-201ENST00000583004 71 ntBASIC0.73□□□□□ -2.29
TRAV3A0A0B4J244 KC877982.1-201ENST00000602313 470 ntBASIC0.73□□□□□ -2.29
TRAV3A0A0B4J244 AL353778.1-201ENST00000603149 408 ntBASIC0.73□□□□□ -2.29
TRAV3A0A0B4J244 AL136363.2-201ENST00000604173 851 ntBASIC0.73□□□□□ -2.29
TRAV3A0A0B4J244 AL355802.3-201ENST00000607571 545 ntBASIC0.73□□□□□ -2.29
TRAV3A0A0B4J244 AC018926.1-201ENST00000616335 435 ntBASIC0.73□□□□□ -2.29
TRAV3A0A0B4J244 AL121895.2-201ENST00000619558 447 ntBASIC0.73□□□□□ -2.29
TRAV3A0A0B4J244 SCARNA4-202ENST00000625402 129 ntBASIC0.73□□□□□ -2.29
TRAV3A0A0B4J244 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
TRAV3A0A0B4J244 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC0.73□□□□□ -2.29
TRAV3A0A0B4J244 LINC02555-201ENST00000563933 1951 ntBASIC0.73□□□□□ -2.29
TRAV3A0A0B4J244 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC0.73□□□□□ -2.29
TRAV3A0A0B4J244 MTND5P35-201ENST00000557537 1720 ntBASIC0.72□□□□□ -2.29
TRAV3A0A0B4J244 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.72□□□□□ -2.29
TRAV3A0A0B4J244 MIR340-201ENST00000362125 95 ntBASIC0.72□□□□□ -2.29
TRAV3A0A0B4J244 RNA5SP327-201ENST00000362494 101 ntBASIC0.72□□□□□ -2.29
TRAV3A0A0B4J244 RNU1-22P-201ENST00000363334 158 ntBASIC0.72□□□□□ -2.29
TRAV3A0A0B4J244 RNU6-743P-201ENST00000364151 106 ntBASIC0.72□□□□□ -2.29
TRAV3A0A0B4J244 SNORD32B-201ENST00000364460 84 ntBASIC0.72□□□□□ -2.29
TRAV3A0A0B4J244 Y_RNA.269-201ENST00000364685 89 ntBASIC0.72□□□□□ -2.29
TRAV3A0A0B4J244 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC0.72□□□□□ -2.29
TRAV3A0A0B4J244 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.72□□□□□ -2.29
TRAV3A0A0B4J244 AC012308.1-201ENST00000451232 178 ntBASIC0.72□□□□□ -2.29
TRAV3A0A0B4J244 AL133373.1-201ENST00000497098 94 ntBASIC0.72□□□□□ -2.29
TRAV3A0A0B4J244 ATP5EP1-201ENST00000510257 156 ntBASIC0.72□□□□□ -2.29
TRAV3A0A0B4J244 RNU7-40P-201ENST00000516397 64 ntBASIC0.72□□□□□ -2.29
TRAV3A0A0B4J244 RNU6-1092P-201ENST00000516955 87 ntBASIC0.72□□□□□ -2.29
TRAV3A0A0B4J244 RNA5SP404-201ENST00000517118 132 ntBASIC0.72□□□□□ -2.29
TRAV3A0A0B4J244 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.72□□□□□ -2.29
TRAV3A0A0B4J244 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.72□□□□□ -2.29
TRAV3A0A0B4J244 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.72□□□□□ -2.29
TRAV3A0A0B4J244 AC136443.5-201ENST00000603741 370 ntBASIC0.72□□□□□ -2.29
TRAV3A0A0B4J244 AC130324.3-201ENST00000614165 542 ntBASIC0.72□□□□□ -2.29
TRAV3A0A0B4J244 5S_rRNA.11-201ENST00000618635 84 ntBASIC0.72□□□□□ -2.29
TRAV3A0A0B4J244 AC006386.1-201ENST00000619436 415 ntBASIC0.72□□□□□ -2.29
TRAV3A0A0B4J244 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.72□□□□□ -2.29
TRAV3A0A0B4J244 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
TRAV3A0A0B4J244 OR4G2P-201ENST00000328113 903 ntBASIC0.71□□□□□ -2.3
TRAV3A0A0B4J244 snoU2_19.1-201ENST00000362361 80 ntBASIC0.71□□□□□ -2.3
TRAV3A0A0B4J244 SNORA63.3-201ENST00000362682 132 ntBASIC0.71□□□□□ -2.3
TRAV3A0A0B4J244 SNORD116-20-201ENST00000384529 92 ntBASIC0.71□□□□□ -2.3
TRAV3A0A0B4J244 MIR194-1-201ENST00000384892 85 ntBASIC0.71□□□□□ -2.3
TRAV3A0A0B4J244 MIR222-201ENST00000384992 110 ntBASIC0.71□□□□□ -2.3
TRAV3A0A0B4J244 AL357139.1-201ENST00000407792 426 ntBASIC0.71□□□□□ -2.3
TRAV3A0A0B4J244 VPS26BP1-201ENST00000417155 755 ntBASIC0.71□□□□□ -2.3
TRAV3A0A0B4J244 RPS25P9-201ENST00000435591 252 ntBASIC0.71□□□□□ -2.3
TRAV3A0A0B4J244 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC0.71□□□□□ -2.3
TRAV3A0A0B4J244 RPS27P1-201ENST00000450552 247 ntBASIC0.71□□□□□ -2.3
TRAV3A0A0B4J244 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC0.71□□□□□ -2.3
TRAV3A0A0B4J244 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC0.71□□□□□ -2.3
TRAV3A0A0B4J244 RPL9P9-202ENST00000466501 579 ntBASIC0.71□□□□□ -2.3
TRAV3A0A0B4J244 AHI1-208ENST00000488690 712 ntTSL 5 BASIC0.71□□□□□ -2.3
TRAV3A0A0B4J244 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC0.71□□□□□ -2.3
TRAV3A0A0B4J244 HMGN1P13-201ENST00000505795 138 ntBASIC0.71□□□□□ -2.3
TRAV3A0A0B4J244 RNA5SP220-201ENST00000516298 104 ntBASIC0.71□□□□□ -2.3
TRAV3A0A0B4J244 SNORA43.2-201ENST00000516652 128 ntBASIC0.71□□□□□ -2.3
TRAV3A0A0B4J244 RNA5SP490-201ENST00000517141 136 ntBASIC0.71□□□□□ -2.3
TRAV3A0A0B4J244 IGHVII-53-1-201ENST00000519538 255 ntBASIC0.71□□□□□ -2.3
TRAV3A0A0B4J244 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC0.71□□□□□ -2.3
TRAV3A0A0B4J244 LRRC6P1-201ENST00000532188 885 ntBASIC0.71□□□□□ -2.3
TRAV3A0A0B4J244 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC0.71□□□□□ -2.3
TRAV3A0A0B4J244 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC0.71□□□□□ -2.3
TRAV3A0A0B4J244 AC018889.1-201ENST00000605372 397 ntBASIC0.71□□□□□ -2.3
TRAV3A0A0B4J244 AP000654.2-201ENST00000605633 586 ntBASIC0.71□□□□□ -2.3
TRAV3A0A0B4J244 AC144521.1-201ENST00000607148 956 ntBASIC0.71□□□□□ -2.3
TRAV3A0A0B4J244 MIR6857-201ENST00000613267 93 ntBASIC0.71□□□□□ -2.3
TRAV3A0A0B4J244 FRG1KP-201ENST00000623592 341 ntBASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 119.3 ms