Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 MTCO1P17-201ENST00000411522 491 ntBASIC0.61□□□□□ -2.31
TRAV27A0A087WT01 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.61□□□□□ -2.31
TRAV27A0A087WT01 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC0.61□□□□□ -2.31
TRAV27A0A087WT01 FTH1P12-201ENST00000432137 551 ntBASIC0.61□□□□□ -2.31
TRAV27A0A087WT01 AL591704.1-201ENST00000432574 275 ntBASIC0.61□□□□□ -2.31
TRAV27A0A087WT01 AL591212.2-201ENST00000433923 257 ntBASIC0.61□□□□□ -2.31
TRAV27A0A087WT01 AC132479.1-201ENST00000449160 144 ntBASIC0.61□□□□□ -2.31
TRAV27A0A087WT01 RPS27AP8-201ENST00000452665 445 ntBASIC0.61□□□□□ -2.31
TRAV27A0A087WT01 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC0.61□□□□□ -2.31
TRAV27A0A087WT01 SNORA3.4-201ENST00000515969 96 ntBASIC0.61□□□□□ -2.31
TRAV27A0A087WT01 ACA64.5-201ENST00000516207 127 ntBASIC0.61□□□□□ -2.31
TRAV27A0A087WT01 SCARNA16.2-201ENST00000516520 172 ntBASIC0.61□□□□□ -2.31
TRAV27A0A087WT01 RNU6-914P-201ENST00000516749 109 ntBASIC0.61□□□□□ -2.31
TRAV27A0A087WT01 DEFB108A-201ENST00000530110 222 ntBASIC0.61□□□□□ -2.31
TRAV27A0A087WT01 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC0.61□□□□□ -2.31
TRAV27A0A087WT01 AC011604.1-201ENST00000545978 196 ntBASIC0.61□□□□□ -2.31
TRAV27A0A087WT01 CR383656.8-201ENST00000549046 145 ntBASIC0.61□□□□□ -2.31
TRAV27A0A087WT01 AL512310.8-201ENST00000550183 120 ntBASIC0.61□□□□□ -2.31
TRAV27A0A087WT01 MIR4653-201ENST00000585107 83 ntBASIC0.61□□□□□ -2.31
TRAV27A0A087WT01 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC0.61□□□□□ -2.31
TRAV27A0A087WT01 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC0.61□□□□□ -2.31
TRAV27A0A087WT01 MZT1P2-201ENST00000604387 248 ntBASIC0.61□□□□□ -2.31
TRAV27A0A087WT01 AC090578.1-201ENST00000604955 591 ntBASIC0.61□□□□□ -2.31
TRAV27A0A087WT01 AC099785.1-201ENST00000605697 437 ntBASIC0.61□□□□□ -2.31
TRAV27A0A087WT01 BX284668.6-201ENST00000606899 438 ntBASIC0.61□□□□□ -2.31
TRAV27A0A087WT01 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
TRAV27A0A087WT01 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC0.61□□□□□ -2.31
TRAV27A0A087WT01 MTND5P42-201ENST00000637720 498 ntBASIC0.61□□□□□ -2.31
TRAV27A0A087WT01 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC0.6□□□□□ -2.31
TRAV27A0A087WT01 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
TRAV27A0A087WT01 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
TRAV27A0A087WT01 MTND3P20-201ENST00000407663 186 ntBASIC0.6□□□□□ -2.31
TRAV27A0A087WT01 AL357139.1-201ENST00000407792 426 ntBASIC0.6□□□□□ -2.31
TRAV27A0A087WT01 AC006461.1-201ENST00000412637 326 ntBASIC0.6□□□□□ -2.31
TRAV27A0A087WT01 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.6□□□□□ -2.31
TRAV27A0A087WT01 PIGFP2-201ENST00000421400 651 ntBASIC0.6□□□□□ -2.31
TRAV27A0A087WT01 AL365338.1-201ENST00000422282 858 ntBASIC0.6□□□□□ -2.31
TRAV27A0A087WT01 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC0.6□□□□□ -2.31
TRAV27A0A087WT01 HSPE1P13-201ENST00000451143 297 ntBASIC0.6□□□□□ -2.31
TRAV27A0A087WT01 AC003071.1-201ENST00000451219 789 ntBASIC0.6□□□□□ -2.31
TRAV27A0A087WT01 AC108059.3-201ENST00000456388 214 ntBASIC0.6□□□□□ -2.31
TRAV27A0A087WT01 RNU6-1053P-201ENST00000515930 101 ntBASIC0.6□□□□□ -2.31
TRAV27A0A087WT01 MIR449C-201ENST00000516047 92 ntBASIC0.6□□□□□ -2.31
TRAV27A0A087WT01 RNU6-1092P-201ENST00000516955 87 ntBASIC0.6□□□□□ -2.31
TRAV27A0A087WT01 RNA5SP490-201ENST00000517141 136 ntBASIC0.6□□□□□ -2.31
TRAV27A0A087WT01 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.6□□□□□ -2.31
TRAV27A0A087WT01 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC0.6□□□□□ -2.31
TRAV27A0A087WT01 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.6□□□□□ -2.31
TRAV27A0A087WT01 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.6□□□□□ -2.31
TRAV27A0A087WT01 MIR1273C-201ENST00000578669 77 ntBASIC0.6□□□□□ -2.31
TRAV27A0A087WT01 AP000654.2-201ENST00000605633 586 ntBASIC0.6□□□□□ -2.31
TRAV27A0A087WT01 AP002802.2-201ENST00000605877 235 ntBASIC0.6□□□□□ -2.31
TRAV27A0A087WT01 AC022893.3-201ENST00000607665 437 ntBASIC0.6□□□□□ -2.31
TRAV27A0A087WT01 AL355816.2-201ENST00000610049 647 ntBASIC0.6□□□□□ -2.31
TRAV27A0A087WT01 AC130324.3-201ENST00000614165 542 ntBASIC0.6□□□□□ -2.31
TRAV27A0A087WT01 MIR6835-201ENST00000621552 64 ntBASIC0.6□□□□□ -2.31
TRAV27A0A087WT01 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.6□□□□□ -2.31
TRAV27A0A087WT01 MTND5P35-201ENST00000557537 1720 ntBASIC0.6□□□□□ -2.31
TRAV27A0A087WT01 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC0.59□□□□□ -2.31
TRAV27A0A087WT01 RNU6-72P-201ENST00000384285 79 ntBASIC0.59□□□□□ -2.31
TRAV27A0A087WT01 SNORA25-201ENST00000384384 134 ntBASIC0.59□□□□□ -2.31
TRAV27A0A087WT01 MIR520A-201ENST00000384862 85 ntBASIC0.59□□□□□ -2.31
TRAV27A0A087WT01 RNU6-278P-201ENST00000390945 109 ntBASIC0.59□□□□□ -2.31
TRAV27A0A087WT01 USP9YP33-201ENST00000412220 421 ntBASIC0.59□□□□□ -2.31
TRAV27A0A087WT01 AL606490.4-201ENST00000423117 127 ntBASIC0.59□□□□□ -2.31
TRAV27A0A087WT01 RNU1-131P-201ENST00000458943 161 ntBASIC0.59□□□□□ -2.31
TRAV27A0A087WT01 AL163195.1-201ENST00000496941 348 ntBASIC0.59□□□□□ -2.31
TRAV27A0A087WT01 SUMO2P5-201ENST00000506790 245 ntBASIC0.59□□□□□ -2.31
TRAV27A0A087WT01 RN7SKP88-201ENST00000516847 250 ntBASIC0.59□□□□□ -2.31
TRAV27A0A087WT01 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC0.59□□□□□ -2.31
TRAV27A0A087WT01 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC0.59□□□□□ -2.31
TRAV27A0A087WT01 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.59□□□□□ -2.31
TRAV27A0A087WT01 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.59□□□□□ -2.31
TRAV27A0A087WT01 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC0.59□□□□□ -2.31
TRAV27A0A087WT01 AL391001.1-201ENST00000602747 715 ntBASIC0.59□□□□□ -2.31
TRAV27A0A087WT01 AL590229.1-201ENST00000603497 542 ntBASIC0.59□□□□□ -2.31
TRAV27A0A087WT01 BNIP3P31-201ENST00000604515 566 ntBASIC0.59□□□□□ -2.31
TRAV27A0A087WT01 AL022345.2-201ENST00000606307 135 ntBASIC0.59□□□□□ -2.31
TRAV27A0A087WT01 AL365434.2-201ENST00000607979 234 ntBASIC0.59□□□□□ -2.31
TRAV27A0A087WT01 7SK.8-201ENST00000612110 250 ntBASIC0.59□□□□□ -2.31
TRAV27A0A087WT01 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.59□□□□□ -2.31
TRAV27A0A087WT01 7SK.11-201ENST00000615477 250 ntBASIC0.59□□□□□ -2.31
TRAV27A0A087WT01 7SK.13-201ENST00000622040 250 ntBASIC0.59□□□□□ -2.31
TRAV27A0A087WT01 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC0.59□□□□□ -2.31
TRAV27A0A087WT01 AC006927.2-201ENST00000639256 389 ntBASIC0.59□□□□□ -2.31
TRAV27A0A087WT01 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC0.59□□□□□ -2.32
TRAV27A0A087WT01 AC008163.1-202ENST00000636004 2889 ntBASIC0.58□□□□□ -2.32
TRAV27A0A087WT01 SNORD3E-201ENST00000362899 217 ntBASIC0.58□□□□□ -2.32
TRAV27A0A087WT01 RNU5A-8P-201ENST00000364102 114 ntBASIC0.58□□□□□ -2.32
TRAV27A0A087WT01 SNORA4.1-201ENST00000364263 144 ntBASIC0.58□□□□□ -2.32
TRAV27A0A087WT01 Y_RNA.332-201ENST00000365271 113 ntBASIC0.58□□□□□ -2.32
TRAV27A0A087WT01 RNU6-395P-201ENST00000365662 106 ntBASIC0.58□□□□□ -2.32
TRAV27A0A087WT01 MIR508-201ENST00000384857 115 ntBASIC0.58□□□□□ -2.32
TRAV27A0A087WT01 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
TRAV27A0A087WT01 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
TRAV27A0A087WT01 Y_RNA.578-201ENST00000390903 88 ntBASIC0.58□□□□□ -2.32
TRAV27A0A087WT01 MIR1284-201ENST00000408337 120 ntBASIC0.58□□□□□ -2.32
TRAV27A0A087WT01 RNU2-7P-201ENST00000410794 178 ntBASIC0.58□□□□□ -2.32
TRAV27A0A087WT01 Y_RNA.623-201ENST00000411128 95 ntBASIC0.58□□□□□ -2.32
TRAV27A0A087WT01 RNU2-64P-201ENST00000411315 191 ntBASIC0.58□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms