Protein–RNA interactions for Protein: Q9Y5W9

SNX11, Sorting nexin-11, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11Q9Y5W9 RNA5SP179-201ENST00000517284 121 ntBASIC3.95□□□□□ -1.78
SNX11Q9Y5W9 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC3.95□□□□□ -1.78
SNX11Q9Y5W9 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.95□□□□□ -1.78
SNX11Q9Y5W9 CYCSP30-201ENST00000546447 172 ntBASIC3.95□□□□□ -1.78
SNX11Q9Y5W9 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.95□□□□□ -1.78
SNX11Q9Y5W9 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SNX11Q9Y5W9 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC3.95□□□□□ -1.78
SNX11Q9Y5W9 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
SNX11Q9Y5W9 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC3.95□□□□□ -1.78
SNX11Q9Y5W9 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC3.95□□□□□ -1.78
SNX11Q9Y5W9 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SNX11Q9Y5W9 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.95□□□□□ -1.78
SNX11Q9Y5W9 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SNX11Q9Y5W9 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC3.94□□□□□ -1.78
SNX11Q9Y5W9 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.94□□□□□ -1.78
SNX11Q9Y5W9 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.94□□□□□ -1.78
SNX11Q9Y5W9 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SNX11Q9Y5W9 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
SNX11Q9Y5W9 Y_RNA.136-201ENST00000363444 102 ntBASIC3.94□□□□□ -1.78
SNX11Q9Y5W9 RNU6-741P-201ENST00000383889 107 ntBASIC3.94□□□□□ -1.78
SNX11Q9Y5W9 Y_RNA.441-201ENST00000384123 112 ntBASIC3.94□□□□□ -1.78
SNX11Q9Y5W9 SNORA22C-201ENST00000384614 134 ntBASIC3.94□□□□□ -1.78
SNX11Q9Y5W9 U8.11-201ENST00000384699 133 ntBASIC3.94□□□□□ -1.78
SNX11Q9Y5W9 U8.12-201ENST00000384701 133 ntBASIC3.94□□□□□ -1.78
SNX11Q9Y5W9 RNU6-1245P-201ENST00000411130 106 ntBASIC3.94□□□□□ -1.78
SNX11Q9Y5W9 AL390729.2-201ENST00000416137 156 ntBASIC3.94□□□□□ -1.78
SNX11Q9Y5W9 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.94□□□□□ -1.78
SNX11Q9Y5W9 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SNX11Q9Y5W9 SNRPEP9-201ENST00000436794 238 ntBASIC3.94□□□□□ -1.78
SNX11Q9Y5W9 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC3.94□□□□□ -1.78
SNX11Q9Y5W9 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.94□□□□□ -1.78
SNX11Q9Y5W9 U8.18-201ENST00000459285 133 ntBASIC3.94□□□□□ -1.78
SNX11Q9Y5W9 RN7SL585P-201ENST00000470538 280 ntBASIC3.94□□□□□ -1.78
SNX11Q9Y5W9 AL049830.2-201ENST00000480072 201 ntBASIC3.94□□□□□ -1.78
SNX11Q9Y5W9 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.94□□□□□ -1.78
SNX11Q9Y5W9 HMGB3P3-201ENST00000510526 400 ntBASIC3.94□□□□□ -1.78
SNX11Q9Y5W9 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.94□□□□□ -1.78
SNX11Q9Y5W9 RNU5F-8P-201ENST00000515941 111 ntBASIC3.94□□□□□ -1.78
SNX11Q9Y5W9 RNU6-479P-201ENST00000516348 105 ntBASIC3.94□□□□□ -1.78
SNX11Q9Y5W9 RNU7-143P-201ENST00000516781 65 ntBASIC3.94□□□□□ -1.78
SNX11Q9Y5W9 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.94□□□□□ -1.78
SNX11Q9Y5W9 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.94□□□□□ -1.78
SNX11Q9Y5W9 CYCSP39-201ENST00000565821 309 ntBASIC3.94□□□□□ -1.78
SNX11Q9Y5W9 AC005176.2-201ENST00000596933 147 ntBASIC3.94□□□□□ -1.78
SNX11Q9Y5W9 AC024153.1-201ENST00000603103 365 ntBASIC3.94□□□□□ -1.78
SNX11Q9Y5W9 AC136601.2-201ENST00000604356 474 ntBASIC3.94□□□□□ -1.78
SNX11Q9Y5W9 AC012468.1-201ENST00000604888 430 ntBASIC3.94□□□□□ -1.78
SNX11Q9Y5W9 AC091167.4-201ENST00000605079 184 ntBASIC3.94□□□□□ -1.78
SNX11Q9Y5W9 AC012314.7-201ENST00000619693 93 ntBASIC3.94□□□□□ -1.78
SNX11Q9Y5W9 MIR4727-201ENST00000622232 55 ntBASIC3.94□□□□□ -1.78
SNX11Q9Y5W9 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.94□□□□□ -1.78
SNX11Q9Y5W9 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.94□□□□□ -1.78
SNX11Q9Y5W9 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
SNX11Q9Y5W9 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SNX11Q9Y5W9 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.93□□□□□ -1.78
SNX11Q9Y5W9 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SNX11Q9Y5W9 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.93□□□□□ -1.78
SNX11Q9Y5W9 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SNX11Q9Y5W9 RNU1-140P-201ENST00000365040 165 ntBASIC3.93□□□□□ -1.78
SNX11Q9Y5W9 RNU6-898P-201ENST00000365627 104 ntBASIC3.93□□□□□ -1.78
SNX11Q9Y5W9 Y_RNA.435-201ENST00000384095 112 ntBASIC3.93□□□□□ -1.78
SNX11Q9Y5W9 RNU6-1145P-201ENST00000384246 107 ntBASIC3.93□□□□□ -1.78
SNX11Q9Y5W9 RNA5SP306-201ENST00000411087 107 ntBASIC3.93□□□□□ -1.78
SNX11Q9Y5W9 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.93□□□□□ -1.78
SNX11Q9Y5W9 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.93□□□□□ -1.78
SNX11Q9Y5W9 RPL23AP83-201ENST00000434984 473 ntBASIC3.93□□□□□ -1.78
SNX11Q9Y5W9 PRSS3P4-201ENST00000453323 162 ntBASIC3.93□□□□□ -1.78
SNX11Q9Y5W9 PPIAP15-201ENST00000479662 484 ntBASIC3.93□□□□□ -1.78
SNX11Q9Y5W9 RPS26P15-201ENST00000488067 348 ntBASIC3.93□□□□□ -1.78
SNX11Q9Y5W9 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC3.93□□□□□ -1.78
SNX11Q9Y5W9 SNORA40.9-201ENST00000515895 93 ntBASIC3.93□□□□□ -1.78
SNX11Q9Y5W9 RNU1-95P-201ENST00000516357 160 ntBASIC3.93□□□□□ -1.78
SNX11Q9Y5W9 RNU1-128P-201ENST00000516704 160 ntBASIC3.93□□□□□ -1.78
SNX11Q9Y5W9 AC026403.1-201ENST00000518938 295 ntBASIC3.93□□□□□ -1.78
SNX11Q9Y5W9 AP005660.1-201ENST00000522972 293 ntBASIC3.93□□□□□ -1.78
SNX11Q9Y5W9 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.93□□□□□ -1.78
SNX11Q9Y5W9 AL365222.1-201ENST00000614661 98 ntBASIC3.93□□□□□ -1.78
SNX11Q9Y5W9 AL034408.1-202ENST00000636088 415 ntBASIC3.93□□□□□ -1.78
SNX11Q9Y5W9 AC009093.8-201ENST00000641769 292 ntBASIC3.93□□□□□ -1.78
SNX11Q9Y5W9 ZNF204P-201ENST00000416749 2397 ntBASIC3.93□□□□□ -1.78
SNX11Q9Y5W9 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
SNX11Q9Y5W9 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SNX11Q9Y5W9 ASNSP1-201ENST00000518311 1939 ntBASIC3.93□□□□□ -1.78
SNX11Q9Y5W9 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.93□□□□□ -1.78
SNX11Q9Y5W9 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.93□□□□□ -1.78
SNX11Q9Y5W9 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SNX11Q9Y5W9 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
SNX11Q9Y5W9 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SNX11Q9Y5W9 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SNX11Q9Y5W9 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SNX11Q9Y5W9 AL359693.1-201ENST00000614959 2407 ntBASIC3.92□□□□□ -1.78
SNX11Q9Y5W9 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SNX11Q9Y5W9 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SNX11Q9Y5W9 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
SNX11Q9Y5W9 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.92□□□□□ -1.78
SNX11Q9Y5W9 Y_RNA.230-201ENST00000364348 109 ntBASIC3.92□□□□□ -1.78
SNX11Q9Y5W9 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.92□□□□□ -1.78
SNX11Q9Y5W9 Z98749.2-208ENST00000381646 500 ntBASIC3.92□□□□□ -1.78
SNX11Q9Y5W9 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
SNX11Q9Y5W9 U8.10-201ENST00000384260 133 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms