Protein–RNA interactions for Protein: Q9Y5Q9

GTF3C3, General transcription factor 3C polypeptide 3, humanhuman

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3Q9Y5Q9 SNORA40.14-201ENST00000516543 86 ntBASIC4.97□□□□□ -1.61
GTF3C3Q9Y5Q9 Y_RNA.721-201ENST00000517207 102 ntBASIC4.97□□□□□ -1.61
GTF3C3Q9Y5Q9 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.97□□□□□ -1.61
GTF3C3Q9Y5Q9 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC4.97□□□□□ -1.61
GTF3C3Q9Y5Q9 PART1_1.1-201ENST00000611761 217 ntBASIC4.97□□□□□ -1.61
GTF3C3Q9Y5Q9 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.97□□□□□ -1.61
GTF3C3Q9Y5Q9 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.96□□□□□ -1.61
GTF3C3Q9Y5Q9 Y_RNA.106-201ENST00000363189 100 ntBASIC4.96□□□□□ -1.62
GTF3C3Q9Y5Q9 RNU4-42P-201ENST00000364738 142 ntBASIC4.96□□□□□ -1.62
GTF3C3Q9Y5Q9 Y_RNA.424-201ENST00000384063 103 ntBASIC4.96□□□□□ -1.62
GTF3C3Q9Y5Q9 RNU6-1093P-201ENST00000391194 107 ntBASIC4.96□□□□□ -1.62
GTF3C3Q9Y5Q9 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.96□□□□□ -1.62
GTF3C3Q9Y5Q9 AL513477.1-202ENST00000417061 214 ntBASIC4.96□□□□□ -1.62
GTF3C3Q9Y5Q9 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.96□□□□□ -1.62
GTF3C3Q9Y5Q9 RPL23AP22-201ENST00000437556 453 ntBASIC4.96□□□□□ -1.62
GTF3C3Q9Y5Q9 RNU7-169P-201ENST00000459456 61 ntBASIC4.96□□□□□ -1.62
GTF3C3Q9Y5Q9 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC4.96□□□□□ -1.62
GTF3C3Q9Y5Q9 RNU4-77P-201ENST00000516692 156 ntBASIC4.96□□□□□ -1.62
GTF3C3Q9Y5Q9 AC104027.1-201ENST00000521887 300 ntBASIC4.96□□□□□ -1.62
GTF3C3Q9Y5Q9 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC4.96□□□□□ -1.62
GTF3C3Q9Y5Q9 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC4.96□□□□□ -1.62
GTF3C3Q9Y5Q9 AC090617.3-201ENST00000573670 475 ntBASIC4.96□□□□□ -1.62
GTF3C3Q9Y5Q9 AC006130.2-201ENST00000586202 326 ntBASIC4.96□□□□□ -1.62
GTF3C3Q9Y5Q9 AL356575.1-201ENST00000603008 283 ntBASIC4.96□□□□□ -1.62
GTF3C3Q9Y5Q9 U2.1-201ENST00000618978 145 ntBASIC4.96□□□□□ -1.62
GTF3C3Q9Y5Q9 MPP6-209ENST00000625307 126 ntTSL 5 BASIC4.96□□□□□ -1.62
GTF3C3Q9Y5Q9 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
GTF3C3Q9Y5Q9 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
GTF3C3Q9Y5Q9 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC4.95□□□□□ -1.62
GTF3C3Q9Y5Q9 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC4.95□□□□□ -1.62
GTF3C3Q9Y5Q9 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
GTF3C3Q9Y5Q9 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
GTF3C3Q9Y5Q9 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC4.95□□□□□ -1.62
GTF3C3Q9Y5Q9 SNORD113.2-201ENST00000364166 89 ntBASIC4.95□□□□□ -1.62
GTF3C3Q9Y5Q9 Y_RNA.319-201ENST00000365138 92 ntBASIC4.95□□□□□ -1.62
GTF3C3Q9Y5Q9 MIR606-201ENST00000384851 96 ntBASIC4.95□□□□□ -1.62
GTF3C3Q9Y5Q9 MIR218-1-201ENST00000384999 110 ntBASIC4.95□□□□□ -1.62
GTF3C3Q9Y5Q9 Y_RNA.592-201ENST00000410274 109 ntBASIC4.95□□□□□ -1.62
GTF3C3Q9Y5Q9 COX6B1P1-201ENST00000415962 213 ntBASIC4.95□□□□□ -1.62
GTF3C3Q9Y5Q9 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC4.95□□□□□ -1.62
GTF3C3Q9Y5Q9 USP9YP16-201ENST00000430287 407 ntBASIC4.95□□□□□ -1.62
GTF3C3Q9Y5Q9 USP9YP23-201ENST00000455085 407 ntBASIC4.95□□□□□ -1.62
GTF3C3Q9Y5Q9 snoU13.6-201ENST00000458785 104 ntBASIC4.95□□□□□ -1.62
GTF3C3Q9Y5Q9 AC140059.1-201ENST00000489238 361 ntBASIC4.95□□□□□ -1.62
GTF3C3Q9Y5Q9 AC008953.1-201ENST00000497334 318 ntBASIC4.95□□□□□ -1.62
GTF3C3Q9Y5Q9 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC4.95□□□□□ -1.62
GTF3C3Q9Y5Q9 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.95□□□□□ -1.62
GTF3C3Q9Y5Q9 Mico1.1-201ENST00000611698 204 ntBASIC4.95□□□□□ -1.62
GTF3C3Q9Y5Q9 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC4.95□□□□□ -1.62
GTF3C3Q9Y5Q9 MIR5739-201ENST00000619803 80 ntBASIC4.95□□□□□ -1.62
GTF3C3Q9Y5Q9 AP005019.3-201ENST00000620418 560 ntBASIC4.95□□□□□ -1.62
GTF3C3Q9Y5Q9 MIR4272-201ENST00000635924 64 ntBASIC4.95□□□□□ -1.62
GTF3C3Q9Y5Q9 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC4.95□□□□□ -1.62
GTF3C3Q9Y5Q9 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC4.95□□□□□ -1.62
GTF3C3Q9Y5Q9 PWAR6-201ENST00000552334 4618 ntBASIC4.95□□□□□ -1.62
GTF3C3Q9Y5Q9 AC006971.1-201ENST00000407916 4486 ntBASIC4.94□□□□□ -1.62
GTF3C3Q9Y5Q9 U3.9-201ENST00000363823 204 ntBASIC4.94□□□□□ -1.62
GTF3C3Q9Y5Q9 SNORD115-8-201ENST00000363856 82 ntBASIC4.94□□□□□ -1.62
GTF3C3Q9Y5Q9 SNORD115-38-201ENST00000365037 82 ntBASIC4.94□□□□□ -1.62
GTF3C3Q9Y5Q9 Y_RNA.358-201ENST00000365491 99 ntBASIC4.94□□□□□ -1.62
GTF3C3Q9Y5Q9 AC092642.1-201ENST00000392417 425 ntBASIC4.94□□□□□ -1.62
GTF3C3Q9Y5Q9 UBA52P6-201ENST00000399822 382 ntBASIC4.94□□□□□ -1.62
GTF3C3Q9Y5Q9 RNU6-1328P-201ENST00000410938 106 ntBASIC4.94□□□□□ -1.62
GTF3C3Q9Y5Q9 RPL26P29-201ENST00000415623 438 ntBASIC4.94□□□□□ -1.62
GTF3C3Q9Y5Q9 RPL30P4-201ENST00000429309 333 ntBASIC4.94□□□□□ -1.62
GTF3C3Q9Y5Q9 AL160004.2-201ENST00000432935 350 ntBASIC4.94□□□□□ -1.62
GTF3C3Q9Y5Q9 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC4.94□□□□□ -1.62
GTF3C3Q9Y5Q9 RPL23AP70-201ENST00000483361 460 ntBASIC4.94□□□□□ -1.62
GTF3C3Q9Y5Q9 RNA5SP34-201ENST00000516887 130 ntBASIC4.94□□□□□ -1.62
GTF3C3Q9Y5Q9 CYCSP29-201ENST00000533731 318 ntBASIC4.94□□□□□ -1.62
GTF3C3Q9Y5Q9 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC4.94□□□□□ -1.62
GTF3C3Q9Y5Q9 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC4.94□□□□□ -1.62
GTF3C3Q9Y5Q9 AC105245.1-201ENST00000581934 244 ntBASIC4.94□□□□□ -1.62
GTF3C3Q9Y5Q9 IGKV1OR2-6-201ENST00000603485 277 ntBASIC4.94□□□□□ -1.62
GTF3C3Q9Y5Q9 PCGEM1.1-201ENST00000613431 131 ntBASIC4.94□□□□□ -1.62
GTF3C3Q9Y5Q9 AL132822.1-201ENST00000617063 513 ntBASIC4.94□□□□□ -1.62
GTF3C3Q9Y5Q9 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC4.94□□□□□ -1.62
GTF3C3Q9Y5Q9 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
GTF3C3Q9Y5Q9 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
GTF3C3Q9Y5Q9 AC080128.1-201ENST00000474389 1917 ntBASIC4.93□□□□□ -1.62
GTF3C3Q9Y5Q9 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
GTF3C3Q9Y5Q9 RNU4-15P-201ENST00000362613 141 ntBASIC4.93□□□□□ -1.62
GTF3C3Q9Y5Q9 RNU6-280P-201ENST00000364145 104 ntBASIC4.93□□□□□ -1.62
GTF3C3Q9Y5Q9 RNU6-1160P-201ENST00000384546 104 ntBASIC4.93□□□□□ -1.62
GTF3C3Q9Y5Q9 MTND5P16-201ENST00000460269 1703 ntBASIC4.93□□□□□ -1.62
GTF3C3Q9Y5Q9 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.93□□□□□ -1.62
GTF3C3Q9Y5Q9 SNORA64.4-201ENST00000516632 81 ntBASIC4.93□□□□□ -1.62
GTF3C3Q9Y5Q9 IGLVIV-65-201ENST00000517313 360 ntBASIC4.93□□□□□ -1.62
GTF3C3Q9Y5Q9 EIF4A1P12-201ENST00000551910 141 ntBASIC4.93□□□□□ -1.62
GTF3C3Q9Y5Q9 AC006600.1-201ENST00000572529 153 ntBASIC4.93□□□□□ -1.62
GTF3C3Q9Y5Q9 AC022149.2-201ENST00000621061 203 ntBASIC4.93□□□□□ -1.62
GTF3C3Q9Y5Q9 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.93□□□□□ -1.62
GTF3C3Q9Y5Q9 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC4.93□□□□□ -1.62
GTF3C3Q9Y5Q9 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC4.92□□□□□ -1.62
GTF3C3Q9Y5Q9 AC068647.1-201ENST00000489539 2265 ntBASIC4.92□□□□□ -1.62
GTF3C3Q9Y5Q9 snoU2_19.1-201ENST00000362361 80 ntBASIC4.92□□□□□ -1.62
GTF3C3Q9Y5Q9 RNA5SP443-201ENST00000363083 132 ntBASIC4.92□□□□□ -1.62
GTF3C3Q9Y5Q9 SNORD56.3-201ENST00000363507 71 ntBASIC4.92□□□□□ -1.62
GTF3C3Q9Y5Q9 U8.10-201ENST00000384260 133 ntBASIC4.92□□□□□ -1.62
GTF3C3Q9Y5Q9 HMGB3P2-201ENST00000411913 584 ntBASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms