Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 HIF1AP1-201ENST00000553642 175 ntBASIC2.39□□□□□ -2.03
PCDHGA1Q9Y5H4 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.39□□□□□ -2.03
PCDHGA1Q9Y5H4 RMST_7.1-201ENST00000621935 268 ntBASIC2.39□□□□□ -2.03
PCDHGA1Q9Y5H4 AL031601.2-202ENST00000622650 282 ntBASIC2.39□□□□□ -2.03
PCDHGA1Q9Y5H4 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.39□□□□□ -2.03
PCDHGA1Q9Y5H4 MTND4P14-201ENST00000435799 1354 ntBASIC2.38□□□□□ -2.03
PCDHGA1Q9Y5H4 AC092881.1-201ENST00000638218 2733 ntBASIC2.38□□□□□ -2.03
PCDHGA1Q9Y5H4 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.38□□□□□ -2.03
PCDHGA1Q9Y5H4 Y_RNA.255-201ENST00000364581 97 ntBASIC2.38□□□□□ -2.03
PCDHGA1Q9Y5H4 SNORA16.2-201ENST00000390991 127 ntBASIC2.38□□□□□ -2.03
PCDHGA1Q9Y5H4 MTCO3P40-201ENST00000392516 676 ntBASIC2.38□□□□□ -2.03
PCDHGA1Q9Y5H4 RNA5SP390-201ENST00000410191 113 ntBASIC2.38□□□□□ -2.03
PCDHGA1Q9Y5H4 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.38□□□□□ -2.03
PCDHGA1Q9Y5H4 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.38□□□□□ -2.03
PCDHGA1Q9Y5H4 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
PCDHGA1Q9Y5H4 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC2.38□□□□□ -2.03
PCDHGA1Q9Y5H4 CACYBPP2-201ENST00000453625 678 ntBASIC2.38□□□□□ -2.03
PCDHGA1Q9Y5H4 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.38□□□□□ -2.03
PCDHGA1Q9Y5H4 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.38□□□□□ -2.03
PCDHGA1Q9Y5H4 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.38□□□□□ -2.03
PCDHGA1Q9Y5H4 AC079140.5-201ENST00000507882 310 ntBASIC2.38□□□□□ -2.03
PCDHGA1Q9Y5H4 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.38□□□□□ -2.03
PCDHGA1Q9Y5H4 RNU2-69P-201ENST00000516061 100 ntBASIC2.38□□□□□ -2.03
PCDHGA1Q9Y5H4 SNORA40.12-201ENST00000516329 111 ntBASIC2.38□□□□□ -2.03
PCDHGA1Q9Y5H4 AC104383.1-201ENST00000530297 370 ntBASIC2.38□□□□□ -2.03
PCDHGA1Q9Y5H4 AL137161.1-201ENST00000532231 390 ntBASIC2.38□□□□□ -2.03
PCDHGA1Q9Y5H4 MTCO3P23-201ENST00000561363 289 ntBASIC2.38□□□□□ -2.03
PCDHGA1Q9Y5H4 AC136619.2-201ENST00000563361 631 ntBASIC2.38□□□□□ -2.03
PCDHGA1Q9Y5H4 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.38□□□□□ -2.03
PCDHGA1Q9Y5H4 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.38□□□□□ -2.03
PCDHGA1Q9Y5H4 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.38□□□□□ -2.03
PCDHGA1Q9Y5H4 BNIP3P30-201ENST00000601184 574 ntBASIC2.38□□□□□ -2.03
PCDHGA1Q9Y5H4 AL356575.1-201ENST00000603008 283 ntBASIC2.38□□□□□ -2.03
PCDHGA1Q9Y5H4 AC021646.1-201ENST00000605469 484 ntBASIC2.38□□□□□ -2.03
PCDHGA1Q9Y5H4 AC064807.4-201ENST00000607201 407 ntBASIC2.38□□□□□ -2.03
PCDHGA1Q9Y5H4 AC068792.1-201ENST00000621354 417 ntBASIC2.38□□□□□ -2.03
PCDHGA1Q9Y5H4 AC016717.2-201ENST00000609089 5141 ntBASIC2.38□□□□□ -2.03
PCDHGA1Q9Y5H4 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.38□□□□□ -2.03
PCDHGA1Q9Y5H4 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
PCDHGA1Q9Y5H4 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
PCDHGA1Q9Y5H4 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.38□□□□□ -2.03
PCDHGA1Q9Y5H4 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
PCDHGA1Q9Y5H4 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
PCDHGA1Q9Y5H4 RNU6-529P-201ENST00000363383 104 ntBASIC2.37□□□□□ -2.03
PCDHGA1Q9Y5H4 RNA5SP456-201ENST00000364002 114 ntBASIC2.37□□□□□ -2.03
PCDHGA1Q9Y5H4 Y_RNA.324-201ENST00000365165 102 ntBASIC2.37□□□□□ -2.03
PCDHGA1Q9Y5H4 Y_RNA.381-201ENST00000365666 102 ntBASIC2.37□□□□□ -2.03
PCDHGA1Q9Y5H4 Y_RNA.409-201ENST00000383990 98 ntBASIC2.37□□□□□ -2.03
PCDHGA1Q9Y5H4 Y_RNA.481-201ENST00000384373 102 ntBASIC2.37□□□□□ -2.03
PCDHGA1Q9Y5H4 RNU1-57P-201ENST00000384491 166 ntBASIC2.37□□□□□ -2.03
PCDHGA1Q9Y5H4 UBE2V1P10-201ENST00000414685 269 ntBASIC2.37□□□□□ -2.03
PCDHGA1Q9Y5H4 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.37□□□□□ -2.03
PCDHGA1Q9Y5H4 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.37□□□□□ -2.03
PCDHGA1Q9Y5H4 AL591806.2-201ENST00000433122 173 ntBASIC2.37□□□□□ -2.03
PCDHGA1Q9Y5H4 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.37□□□□□ -2.03
PCDHGA1Q9Y5H4 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.37□□□□□ -2.03
PCDHGA1Q9Y5H4 MTND1P1-201ENST00000445453 368 ntBASIC2.37□□□□□ -2.03
PCDHGA1Q9Y5H4 PSPHP1-201ENST00000450062 261 ntBASIC2.37□□□□□ -2.03
PCDHGA1Q9Y5H4 RNU7-180P-201ENST00000459240 63 ntBASIC2.37□□□□□ -2.03
PCDHGA1Q9Y5H4 SRRM1P2-201ENST00000464531 1192 ntBASIC2.37□□□□□ -2.03
PCDHGA1Q9Y5H4 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.37□□□□□ -2.03
PCDHGA1Q9Y5H4 SNORA43.2-201ENST00000516652 128 ntBASIC2.37□□□□□ -2.03
PCDHGA1Q9Y5H4 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.37□□□□□ -2.03
PCDHGA1Q9Y5H4 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.37□□□□□ -2.03
PCDHGA1Q9Y5H4 AP001893.2-201ENST00000526949 202 ntBASIC2.37□□□□□ -2.03
PCDHGA1Q9Y5H4 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.37□□□□□ -2.03
PCDHGA1Q9Y5H4 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.37□□□□□ -2.03
PCDHGA1Q9Y5H4 BNIP3P6-201ENST00000549284 499 ntBASIC2.37□□□□□ -2.03
PCDHGA1Q9Y5H4 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.37□□□□□ -2.03
PCDHGA1Q9Y5H4 AC078899.2-201ENST00000595282 212 ntBASIC2.37□□□□□ -2.03
PCDHGA1Q9Y5H4 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.37□□□□□ -2.03
PCDHGA1Q9Y5H4 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.37□□□□□ -2.03
PCDHGA1Q9Y5H4 AC103810.6-201ENST00000606708 136 ntBASIC2.37□□□□□ -2.03
PCDHGA1Q9Y5H4 AC104237.2-201ENST00000612456 443 ntBASIC2.37□□□□□ -2.03
PCDHGA1Q9Y5H4 AC026585.1-201ENST00000619582 524 ntBASIC2.37□□□□□ -2.03
PCDHGA1Q9Y5H4 AC012640.5-201ENST00000623897 319 ntBASIC2.37□□□□□ -2.03
PCDHGA1Q9Y5H4 AC022418.1-201ENST00000624118 445 ntBASIC2.37□□□□□ -2.03
PCDHGA1Q9Y5H4 AL354685.2-201ENST00000448218 1447 ntBASIC2.36□□□□□ -2.03
PCDHGA1Q9Y5H4 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.36□□□□□ -2.03
PCDHGA1Q9Y5H4 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
PCDHGA1Q9Y5H4 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.36□□□□□ -2.03
PCDHGA1Q9Y5H4 Y_RNA.41-201ENST00000362646 102 ntBASIC2.36□□□□□ -2.03
PCDHGA1Q9Y5H4 SNORD114-1-201ENST00000362705 72 ntBASIC2.36□□□□□ -2.03
PCDHGA1Q9Y5H4 RNU6-1322P-201ENST00000364309 107 ntBASIC2.36□□□□□ -2.03
PCDHGA1Q9Y5H4 Y_RNA.399-201ENST00000383955 105 ntBASIC2.36□□□□□ -2.03
PCDHGA1Q9Y5H4 MIR95-201ENST00000385072 81 ntBASIC2.36□□□□□ -2.03
PCDHGA1Q9Y5H4 CALM2P3-201ENST00000400429 449 ntBASIC2.36□□□□□ -2.03
PCDHGA1Q9Y5H4 AL133475.1-201ENST00000404414 305 ntBASIC2.36□□□□□ -2.03
PCDHGA1Q9Y5H4 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.36□□□□□ -2.03
PCDHGA1Q9Y5H4 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.36□□□□□ -2.03
PCDHGA1Q9Y5H4 TIMM9P3-201ENST00000428659 274 ntBASIC2.36□□□□□ -2.03
PCDHGA1Q9Y5H4 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.36□□□□□ -2.03
PCDHGA1Q9Y5H4 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC2.36□□□□□ -2.03
PCDHGA1Q9Y5H4 AC009238.1-201ENST00000442165 424 ntBASIC2.36□□□□□ -2.03
PCDHGA1Q9Y5H4 AC096638.1-201ENST00000444678 216 ntBASIC2.36□□□□□ -2.03
PCDHGA1Q9Y5H4 PRPS1P1-201ENST00000445305 876 ntBASIC2.36□□□□□ -2.03
PCDHGA1Q9Y5H4 AC009237.6-201ENST00000446969 424 ntBASIC2.36□□□□□ -2.03
PCDHGA1Q9Y5H4 AC083798.1-201ENST00000472671 131 ntBASIC2.36□□□□□ -2.03
PCDHGA1Q9Y5H4 RPL21P99-201ENST00000480369 423 ntBASIC2.36□□□□□ -2.03
PCDHGA1Q9Y5H4 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms